Ss1.1-Lng1-LNG010010C08.5
|
GCGTCAGCGGTCTGCGCAGGGCAGAAGGGGGCGACGGGGACCTCCGAGTGCGCAGAACCC
CGCGCAGAGCCCCACCCAGAGCGGTGCGCGCCGGCGCCTGGCGTGCACACCCAGAGTGGT
GGCGGGGCGACGAGGGCACCGTGGGGCCCGGGGCCTGCAGCCCAGCCTCACGCCGCCTAT
CGGGGCGACTACGGGTGCGGGGCACTGCTGCGCCGGAAGCATCCTGCTGCTGCTCGTCCT
CTACTTCAAATTCCAGCGGCTCCGCAGCCCCGCCTCGCCGGGCGTCCCCTGCTCACCGTT
AGCCTCCGCCACCTGCTGCCTTCCGTTCTCGCGGCCGCGGTGGCTTTCGCGCCCCACAGA
GGGGCGGCGCGATGGTGCGTGAGACGGCTTCATCAGCAGCCTGTCGGGTGAGTTCCGGCG
GAGACCTCCTGCTCCTGCGCCCCGACCTAGAGGCTGTGCTCTCCTGACCTCGCCTCCCCC
GCCTCGACATCTCTTCCTCCGGCCTCCCCGCCTCACTTCATCCGCTCCCAGACCTCACTC
CCTCCACCGGTCCTCCTCGCTCGCTGATCTCCGCCCCTCTCCATGCTCCCAGGCCTCTCG
CCCACCCAGACCCCAGCCTGCTGCCGCAGCTCCTCAATCACCTGCTCGGGAGCTCATCTC
ACTTGTCTGCGTTCACCTCCTGATTTAATTCAATAGGGCCCGAGACAGTGGTTTTGACAC
TTTGAGGAAAGAAACGAGAGGGTGAAGTCAAGAACTTCAAGAAAAAAAGTGGTAGTATTT
GTGAAACTTGGAGAGGGTGATAAGAAGTGATTTAATTCATATATTATTTTGCTAAAATGA
GAGGTAGAAATCTGACATAGCAACAATGTGTAAATTTTTTTTTAAAATGCTCATTATCAG
TTGTAAACCTTTGCTTTCTAGGAAGTGAAATAGTTTTATTCAGGTCCTCAGAATGCAAAT
TGTGCTCTATAAGCTATTTTTACTATATTTTACTCCTTATAGGTTCCACCACACCAAAAT
ATAAGGCGAGATTGCAAAAATGGCTCAGAGAACCCCTACTGAAATGGACAGATAATTAGC
TATGCAGCCAGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCGTCAGCGGTCTGCGCAGGGCAGAAGGGGGCGACGGGGACCTCCGAGTGCGCAGAACCC
CGCGCAGAGCCCCACCCAGAGCGGTGCGCGCCGGCGCCTGGCGTGCACACCCAGAGTGGT
GGCGGGGCGACGAGGGCACCGTGGGGCCCGGGGCCTGCAGCCCAGCCTCACGCCGCCTAT
CGGGGCGACTACGGGTGCGGGGCACTGCTGCGCCGGAAGCATCCTGCTGCTGCTCGTCCT
CTACTTCAAATTCCAGCGGCTCCGCAGCCCCGCCTCGCCGGGCGTCCCCTGCTCACCGTT
AGCCTCCGCCACCTGCTGCCTTCCGTTCTCGCGGCCGCGGTGGCTTTCGCGCCCCACAGA
GGGGCGGCGCGATGGTGCGTGAGACGGCTTCATCAGCAGCCTGTCGGGTGAGTTCCGGCG
GAGACCTCCTGCTCCTGCGCCCCGACCTAGAGGCTGTGCTCTCCTGACCTCGCCTCCCCC
GCCTCGACATCTCTTCCTCCGGCCTCCCCGCCTCACTTCATCCGCTCCCAGACCTCACTC
CCTCCACCGGTCCTCCTCGCTCGCTGATCTCCGCCCCTCTCCATGCTCCCAGGCCTCTCG
CCCACCCAGACCCCAGCCTGCTGCCGCAGCTCCTCAATCACCTGCTCGGGAGCTCATCTC
ACTTGTCTGCGTTCACCTCCTGATTTAATTCAATAGGGCCCGAGACAGTGGTTTTGACAC
TTTGAGGAAAGAAACGAGAGGGTGAAGTCAAGAACTTCAAGAAAAAAAGTGGTAGTATTT
GTGAAACTTGGAGAGGGTGATAAGAAGTGATTTAATTCATATATTATTTTGCTAAAATGA
GAGGTAGAAATCTGACATAGCAACAATGTGTAAATTTTTTTTTAAAATGCTCATTATCAG
TTGTAAACCTTTGCTTTCTAGGAAGTGAAATAGTTTTATTCAGGTCCTCAGAATGCAAAT
TGTGCTCTATAAGCTATTTTTACTATATTTTACTCCTTATAGGTTCCACCACACCAAAAT
ATAAGGCGAGATTGCAAAAATGGCTCAGAGAACCCCTACTGAAATGGACAGATAATTAGC
TATGCAGCCAGT
|
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210-368, gnl|bosTau2|chr16 (23934100-23934254) |
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210-368, gnl|canFam2|chr7 (36009703-36009881) |
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210-368, gnl|danRer3|chr14 (53170460-53170281) |
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210-368, gnl|dasNov1|scaffold_5251 (30392-30214) |
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210-368, gnl|fr1|chrUn (194315028-194314849) |
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210-368, gnl|galGal2|chr3 (32095800-32095621) |
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210-368, gnl|hg17|chr1 (238129221-238129400) |
|
210-368, gnl|Hg17|chr1 (238129434-238129280) |
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210-368, gnl|mm7|chr1 (175658449-175658628) |
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210-368, gnl|Mm7|chr1 (175658662-175658508) |
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210-368, gnl|monDom2|scaffold_13 (42381855-42381676) |
|
210-368, gnl|oryCun1|scaffold_204654 (54376-54555) |
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210-368, gnl|panTro1|chr1 (222139183-222139363) |
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210-368, gnl|rheMac2|chr1 (215411324-215411145) |
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210-368, gnl|rn3|chr13 (91615434-91615613) |
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210-368, gnl|tetNig1|chrUn_random (83647561-83647740) |
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210-368, gnl|xenTro1|scaffold_1807 (6312-6464) |
| |
|
459-1092, gnl|bosTau2|chr16 (23934486-23935121) |
|
459-1092, gnl|Hg17|chr1 (238129088-238128492) |
|
459-1092, gnl|Mm7|chr1 (175658301-175657773) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
210-368, gnl|bosTau2|chr16 (23934100-23934254) |
|
210-368, gnl|canFam2|chr7 (36009703-36009881) |
|
210-368, gnl|danRer3|chr14 (53170460-53170281) |
|
210-368, gnl|dasNov1|scaffold_5251 (30392-30214) |
|
210-368, gnl|fr1|chrUn (194315028-194314849) |
|
210-368, gnl|galGal2|chr3 (32095800-32095621) |
|
210-368, gnl|hg17|chr1 (238129221-238129400) |
|
210-368, gnl|Hg17|chr1 (238129434-238129280) |
|
210-368, gnl|mm7|chr1 (175658449-175658628) |
|
210-368, gnl|Mm7|chr1 (175658662-175658508) |
|
210-368, gnl|monDom2|scaffold_13 (42381855-42381676) |
|
210-368, gnl|oryCun1|scaffold_204654 (54376-54555) |
|
210-368, gnl|panTro1|chr1 (222139183-222139363) |
|
210-368, gnl|rheMac2|chr1 (215411324-215411145) |
|
210-368, gnl|rn3|chr13 (91615434-91615613) |
|
210-368, gnl|tetNig1|chrUn_random (83647561-83647740) |
|
210-368, gnl|xenTro1|scaffold_1807 (6312-6464) |
| |
|
459-1092, gnl|bosTau2|chr16 (23934486-23935121) |
|
459-1092, gnl|Hg17|chr1 (238129088-238128492) |
|
459-1092, gnl|Mm7|chr1 (175658301-175657773) |
