Ss1.1-Lng1-LNG010012F05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTGCATTGCCTGGCTCAGGGGCCATGCTGACATCGCCCCCTGAGGACCTGGCTGCAAGCC CAAACCCCCAGGTGGCCTGGAGCCCTGGACCGTGCTGGAAGCTGGACGGAGCTCCCTGGC TGAGGTAGGGCCCCACCTGGTTGCCAGCAACCCTATCCTCCTCCCGCCAGTCTTCCCGAG TGAGTCCTTTGTGCTGCCTGCCTGGCCTCTGATCCAGGCCCCCACTTACGGCCAAGGGGG CTCTGCAGCTGGCTGGGCCTGGATCCCCCTTCCAGCCATCGCCTCCCACTGGGCCTCCTC TCTTAAGGAGAAGAAGAGCCCTGACAGGGCCCTACCCCTCCGGCAGTGGGTGGCAGGGCA AGGGGCACCAGAGAGGGAGCAGGGAAAAGCTGGGCGCAGGAGGCCAGAGGCGCTCTCCCC AGACTGCGGTAGTGGCCAGGGACCCTCTGCCAGCCTTGCCACGGAGGCCCGTGGTCCCTG CAATTAGCAGTGCCTCCTGGATGGGACTCTCCTGGGCCCTGCCCATCCTTCTCAGCTCGC AGAGACACTCATGGTGACACAGGCTTCCTAGATGGGGAGCTGGGAGGGTCCCTAAGGGCT ACTCTACAGATGGAGACACTCAGGCCCAGGCTATGATTGGCCTAAGACCACACTGCTGGT CAGGGTCAACACAGGGCCTTGAACATTGGCAGGGGTTTTCCTCTGTGGGCTCCAGAACGA CCCTTGCCTGGTGGACAGTAGAGGATCTTGTGATCATGTCTTGGGCAGGTAATGTCCCTG TTACCTGGGCCAGTCTCTTCCTGAGGTTTTTGTTTTTTCCTGGCAGAGATAAGCCGTAAA CACAATGAACATAGCTTTGCCCTTCCCTGGGCCCTAGCACTGAGGTTGAGTGGACCACAT CCGGGGAAAGCCACAGGGCTGGCATCCCAGCTGGATGGGTCATTCCCATCGCCCCTTGGC CTGGACAGAGGTGGAGGCTGAGCCACGCCTGACTTCCTCCCTGGGGACCTGCCTCCAGCC TTGTCAACCCCCTCCCCACCCCAGGAAGCCTTACATGCCCCCTCCGTTGACCCGGCCTTC TCCTCTGAGGGTTTAATAGGAGGTGCTCCTGCTCCAAGTTGTTCCCCGGTTTCCTCATTT ATCCCTGCAGCTGACAAGGCTGGGAGGGTTCCTCTCTGCCCTCCGGGGGCTTCCAGAGCC CAAGTGGAGAGAATTGCTCATAGCAGGAGGGGTCTGAGGCATGTATGTATTCCTGCATGT GGGTACCCACAGAAGCAAGTGGGATTTCTGTGTTAAGGCCTGCTGATTCCAGCAGAAAGA GACCAGTCTGGTGGCGGTGGCCCCCTGTGTCTCCTGCCACATGCCTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTGCATTGCCTGGCTCAGGGGCCATGCTGACATCGCCCCCTGAGGACCTGGCTGCAAGCC CAAACCCCCAGGTGGCCTGGAGCCCTGGACCGTGCTGGAAGCTGGACGGAGCTCCCTGGC TGAGGTAGGGCCCCACCTGGTTGCCAGCAACCCTATCCTCCTCCCGCCAGTCTTCCCGAG TGAGTCCTTTGTGCTGCCTGCCTGGCCTCTGATCCAGGCCCCCACTTACGGCCAAGGGGG CTCTGCAGCTGGCTGGGCCTGGATCCCCCTTCCAGCCATCGCCTCCCACTGGGCCTCCTC TCTTAAGGAGAAGAAGAGCCCTGACAGGGCCCTACCCCTCCGGCAGTGGGTGGCAGGGCA AGGGGCACCAGAGAGGGAGCAGGGAAAAGCTGGGCGCAGGAGGCCAGAGGCGCTCTCCCC AGACTGCGGTAGTGGCCAGGGACCCTCTGCCAGCCTTGCCACGGAGGCCCGTGGTCCCTG CAATTAGCAGTGCCTCCTGGATGGGACTCTCCTGGGCCCTGCCCATCCTTCTCAGCTCGC AGAGACACTCATGGTGACACAGGCTTCCTAGATGGGGAGCTGGGAGGGTCCCTAAGGGCT ACTCTACAGATGGAGACACTCAGGCCCAGGCTATGATTGGCCTAAGACCACACTGCTGGT CAGGGTCAACACAGGGCCTTGAACATTGGCAGGGGTTTTCCTCTGTGGGCTCCAGAACGA CCCTTGCCTGGTGGACAGTAGAGGATCTTGTGATCATGTCTTGGGCAGGTAATGTCCCTG TTACCTGGGCCAGTCTCTTCCTGAGGTTTTTGTTTTTTCCTGGCAGAGATAAGCCGTAAA CACAATGAACATAGCTTTGCCCTTCCCTGGGCCCTAGCACTGAGGTTGAGTGGACCACAT CCGGGGAAAGCCACAGGGCTGGCATCCCAGCTGGATGGGTCATTCCCATCGCCCCTTGGC CTGGACAGAGGTGGAGGCTGAGCCACGCCTGACTTCCTCCCTGGGGACCTGCCTCCAGCC TTGTCAACCCCCTCCCCACCCCAGGAAGCCTTACATGCCCCCTCCGTTGACCCGGCCTTC TCCTCTGAGGGTTTAATAGGAGGTGCTCCTGCTCCAAGTTGTTCCCCGGTTTCCTCATTT ATCCCTGCAGCTGACAAGGCTGGGAGGGTTCCTCTCTGCCCTCCGGGGGCTTCCAGAGCC CAAGTGGAGAGAATTGCTCATAGCAGGAGGGGTCTGAGGCATGTATGTATTCCTGCATGT GGGTACCCACAGAAGCAAGTGGGATTTCTGTGTTAAGGCCTGCTGATTCCAGCAGAAAGA GACCAGTCTGGTGGCGGTGGCCCCCTGTGTCTCCTGCCACATGCCTCC |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 183-296, - strand, RNAz p=0.822035 | |
| 913-1029, - strand, RNAz p=0.688955 | |
| 1224-1364, + strand, RNAz p=0.98532 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 183-296, - strand, RNAz p=0.822035 | |
| 913-1029, - strand, RNAz p=0.688955 | |
| 1224-1364, + strand, RNAz p=0.98532 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-511, gnl|bosTau2|chr2 (83652009-83652515) | |
| 1-511, gnl|Hg17|chr1 (16284436-16283914) | |
| 1-511, gnl|Mm7|chr4 (140621323-140621749) | |
| 874-1110, gnl|bosTau2|chr2 (83652988-83653214) | |
| 874-1110, gnl|canFam2|chr2 (84383595-84382934) | |
| 874-1110, gnl|dasNov1|scaffold_35092 (4154-4764) | |
| 874-1110, gnl|echTel1|scaffold_233829 (5690-5084) | |
| 874-1110, gnl|hg17|chr1 (16283296-16283986) | |
| 874-1110, gnl|Hg17|chr1 (16283528-16283295) | |
| 874-1110, gnl|mm7|chr4 (140622349-140621743) | |
| 874-1110, gnl|oryCun1|scaffold_90148 (4904-5528) | |
| 874-1110, gnl|panTro1|chr1 (16444617-16445303) | |
| 874-1110, gnl|rheMac2|chr1 (19014832-19015517) | |
| 874-1110, gnl|rn3|chr5 (160106547-160105881) | |
| 1185-1364, gnl|bosTau2|chr2 (83653408-83653589) | |
| 1185-1364, gnl|canFam2|chr2 (84383894-84383665) | |
| 1185-1364, gnl|dasNov1|scaffold_35092 (3856-4062) | |
| 1185-1364, gnl|echTel1|scaffold_233829 (5953-5755) | |
| 1185-1364, gnl|hg17|chr1 (16283014-16283235) | |
| 1185-1364, gnl|Hg17|chr1 (16283222-16283051) | |
| 1185-1364, gnl|mm7|chr4 (140622550-140622406) | |
| 1185-1364, gnl|oryCun1|scaffold_90148 (4659-4837) | |
| 1185-1364, gnl|panTro1|chr1 (16444335-16444556) | |
| 1185-1364, gnl|rheMac2|chr1 (19014553-19014774) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-511, gnl|bosTau2|chr2 (83652009-83652515) | |
| 1-511, gnl|Hg17|chr1 (16284436-16283914) | |
| 1-511, gnl|Mm7|chr4 (140621323-140621749) | |
| 874-1110, gnl|bosTau2|chr2 (83652988-83653214) | |
| 874-1110, gnl|canFam2|chr2 (84383595-84382934) | |
| 874-1110, gnl|dasNov1|scaffold_35092 (4154-4764) | |
| 874-1110, gnl|echTel1|scaffold_233829 (5690-5084) | |
| 874-1110, gnl|hg17|chr1 (16283296-16283986) | |
| 874-1110, gnl|Hg17|chr1 (16283528-16283295) | |
| 874-1110, gnl|mm7|chr4 (140622349-140621743) | |
| 874-1110, gnl|oryCun1|scaffold_90148 (4904-5528) | |
| 874-1110, gnl|panTro1|chr1 (16444617-16445303) | |
| 874-1110, gnl|rheMac2|chr1 (19014832-19015517) | |
| 874-1110, gnl|rn3|chr5 (160106547-160105881) | |
| 1185-1364, gnl|bosTau2|chr2 (83653408-83653589) | |
| 1185-1364, gnl|canFam2|chr2 (84383894-84383665) | |
| 1185-1364, gnl|dasNov1|scaffold_35092 (3856-4062) | |
| 1185-1364, gnl|echTel1|scaffold_233829 (5953-5755) | |
| 1185-1364, gnl|hg17|chr1 (16283014-16283235) | |
| 1185-1364, gnl|Hg17|chr1 (16283222-16283051) | |
| 1185-1364, gnl|mm7|chr4 (140622550-140622406) | |
| 1185-1364, gnl|oryCun1|scaffold_90148 (4659-4837) | |
| 1185-1364, gnl|panTro1|chr1 (16444335-16444556) | |
| 1185-1364, gnl|rheMac2|chr1 (19014553-19014774) |