Non-Coding RNA Search

Ss1.1-Lng1-LNG010022A06.5

Sequence:


               
               TTATCGTCCGTCATGGTCTAACCCAGGAGACAGGAGACTGAATATAGTTTCCGGTGCTAC
ACAATAGGACTTCGCTGCTTATCCATTCTAAATGTAACAGTTTGCACCTACCAGTAATTT
TTACATGCTCCGTCTTCTAGTTGAGTGTTGATCCTTATGTACTAGAGGCCAGTCATCTTA
TGCCTCTCAGTTGTCTTTGCACTGAGTTCTTCCTCTTTGTAGAAGGAATCGCTGTGTTGA
ACAAGCTTCAGCCAAGTTTCTCTTCGATGGGCAGGCACTAGCGCTTGGCATTCCCTAGCA
ACTACATGGATCTCAGGTACCATGTCTACCTGGTAAGTTTACTCCTGTCTTTATTATTTT
CATATCCATATTTCTCTTTGTCCTGGCTCATTTACTTCATCATTTTGAATTGCAGCTATT
GTTGTAAATCACCTCAGATCTTTTATTGGATGGGGCATCATATGAAGAGTTTTTTTTTTC
CTGGCACATCTTCAACTGCATGCAAAGTACCCCGTCTGATCTTTGTGTTGACCTCTAGCA
AACTGCATCTTGTACATTTGTTTGTCCTTGTATGTGAGTCTACTGGTTATTTAAAGATAT
ATAGATCTATGCATACACACACACAAAAAACTCCTGGCAGAGTTTGAGCTTCTAGTCATT
GTAGCCCCAACATGGCTGCCTAGCATAGAACCTGGTATTTAGTTGGTACTCAATATTTGT
TGAGTGAGTGATCAAATTATTAAGATCCGTGTGGTTGTTAGGAGTATCTGTTATAAATGG
TGATTTTTAACAAGCAGTGGGAGTTGGATCTAGAGAAGAAATGATTGCTACCAAAACATT
GCCAGTGTAAACGGGAACAGGCAGAAATAAATGTCTATCGTAAATTATAAGCTTAAAATT
TAAAAGGCATCCTTAATCAGCTTTCACTCCTTTATTTTAGCAAGGGCTTGTCATACACAA
CTCTGTTTATTTGTTTAAATTTGTCGGCACTCGCTGCCCATCTGTATGCATGCCGGACAG
AACCAGATAGCTGCACACCTTTGCTGCCCTCCCACTTACAGGTCACATAGCCCATTTCTG
GTCCTCAGTAAATGCGTGGTAGAGAAGAGAAGGGAGGCAGTTTAGAGGCTGGTTCTTTGA
AATATGGTGTAAAAAGTTTTTTCCTTTTTTGTCGCATGTGATTTGGATGGCAGCATGCTG
AGATTTTAATTATCCCCACTTTAAAATATTGCAACGTGGCTATTGTAAAAACACTTTCCA
TTGTCCTTGATGAAGGGAGGAGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTATCGTCCGTCATGGTCTAACCCAGGAGACAGGAGACTGAATATAGTTTCCGGTGCTAC
ACAATAGGACTTCGCTGCTTATCCATTCTAAATGTAACAGTTTGCACCTACCAGTAATTT
TTACATGCTCCGTCTTCTAGTTGAGTGTTGATCCTTATGTACTAGAGGCCAGTCATCTTA
TGCCTCTCAGTTGTCTTTGCACTGAGTTCTTCCTCTTTGTAGAAGGAATCGCTGTGTTGA
ACAAGCTTCAGCCAAGTTTCTCTTCGATGGGCAGGCACTAGCGCTTGGCATTCCCTAGCA
ACTACATGGATCTCAGGTACCATGTCTACCTGGTAAGTTTACTCCTGTCTTTATTATTTT
CATATCCATATTTCTCTTTGTCCTGGCTCATTTACTTCATCATTTTGAATTGCAGCTATT
GTTGTAAATCACCTCAGATCTTTTATTGGATGGGGCATCATATGAAGAGTTTTTTTTTTC
CTGGCACATCTTCAACTGCATGCAAAGTACCCCGTCTGATCTTTGTGTTGACCTCTAGCA
AACTGCATCTTGTACATTTGTTTGTCCTTGTATGTGAGTCTACTGGTTATTTAAAGATAT
ATAGATCTATGCATACACACACACAAAAAACTCCTGGCAGAGTTTGAGCTTCTAGTCATT
GTAGCCCCAACATGGCTGCCTAGCATAGAACCTGGTATTTAGTTGGTACTCAATATTTGT
TGAGTGAGTGATCAAATTATTAAGATCCGTGTGGTTGTTAGGAGTATCTGTTATAAATGG
TGATTTTTAACAAGCAGTGGGAGTTGGATCTAGAGAAGAAATGATTGCTACCAAAACATT
GCCAGTGTAAACGGGAACAGGCAGAAATAAATGTCTATCGTAAATTATAAGCTTAAAATT
TAAAAGGCATCCTTAATCAGCTTTCACTCCTTTATTTTAGCAAGGGCTTGTCATACACAA
CTCTGTTTATTTGTTTAAATTTGTCGGCACTCGCTGCCCATCTGTATGCATGCCGGACAG
AACCAGATAGCTGCACACCTTTGCTGCCCTCCCACTTACAGGTCACATAGCCCATTTCTG
GTCCTCAGTAAATGCGTGGTAGAGAAGAGAAGGGAGGCAGTTTAGAGGCTGGTTCTTTGA
AATATGGTGTAAAAAGTTTTTTCCTTTTTTGTCGCATGTGATTTGGATGGCAGCATGCTG
AGATTTTAATTATCCCCACTTTAAAATATTGCAACGTGGCTATTGTAAAAACACTTTCCA
TTGTCCTTGATGAAGGGAGGAGCT

Aligned organism(s): 4 entry(ies)

More info

Aligned organism(s): 4 entry(ies)

Help | Less info


               
               132-419, gnl|bosTau2|chr26 (26542505-26542220)
               

               
               132-419, gnl|Hg17|chr10 (119748272-119748034)
               


               
               784-1284, gnl|bosTau2|chr26 (26541490-26540981)
               

               
               784-1284, gnl|Hg17|chr10 (119747645-119747142)

Aligned organism(s): 4 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               132-419, gnl|bosTau2|chr26 (26542505-26542220)
               

               
               132-419, gnl|Hg17|chr10 (119748272-119748034)
               


               
               784-1284, gnl|bosTau2|chr26 (26541490-26540981)
               

               
               784-1284, gnl|Hg17|chr10 (119747645-119747142)

	132-419, gnl\|bosTau2\|chr26 (26542505-26542220)
	132-419, gnl\|Hg17\|chr10 (119748272-119748034)

	784-1284, gnl\|bosTau2\|chr26 (26541490-26540981)
	784-1284, gnl\|Hg17\|chr10 (119747645-119747142)