Non-Coding RNA Search

Ss1.1-Lng1-LNG010026C03.5

Sequence:


               
               TATCCTGGCCTCAGGTCAAGAGTGCTTTCTGATGGCTGGAAGATTCTGGATTGTTGCCCA
TCCCTGATCATGTGCAGAGGGAAATGCAGAACTACCTGCCTCAAATGTAGCACATTTATC
TCTTTTCTGCCCTCCACTTGCTCACCTCTCATGTGGTAGCCCCAGCAGCATGTTGCTCAT
CATTTTGAGCCGTGCTAGATGAGATACTTTTGTTGAACAGTCTGTTTTTTACACTAGAAG
TGGAATGTATCCTCTAATTTGAGGCAAGAAATTTTGGATGGCTGAAAGGGAAGCTAATTT
TCCAAACTAAGGCATAACCAGAATTAGCTGAAAAGGCTTGGAATGAATTACTCAAGAAAA
AGGATAAAGTGAAGATGGTTAAGGATGTGTGTATACCAAATCCTTTGCAGAGGATTAAAT
AGAAAGACGTGGTTTATACCAGGTTCCAGGTACAGAGGGAGTGGAGGCTCTGAGATGAGT
CAAGCCAAGTCTCAGTAGTCTCTTAGGTGGACAGGAGGACTCTGACACTCAGTAACAGAG
CCCGGTTTGGCCAGAAAAACAGCCCTCAGAAAACATAGGAGTGAAATGGGCTTAGATCAA
GAGAAAGTGAGAAGACCAGGCAGGTAAACAGCAGCAAATGTTTGCATGAATGAAATTGTA
ATGGCAAACATTTCAGTAAACTGGATTCATTGTTGTCCACAAAAAGAACCTACATTTGTG
ATTTTGCTATTTGTTAAGCAGTTTCCCTTCTTGAGTTCTTGAGAAGTCTGCTGCTTGGCA
TTCCTCTAGTATTACAGAAAGCCTACCCAGATTTCCATAATCAAAAACAAGTGTTAAGCA
CTGCTAATCATTTTCCTGCAATTCTTGCTGTTGGATTTATTCTTTAGTTGAGTTTAGTTC
TTTAAGGGACTCAAAATAATTTGGGGTCTAGTAGCCAAGGATGAGACCAGCCCTGCTTCT
TACTAGAGCATTGATTCTTGAAGAGAGGTTGGTGGTCCCTTTAAAAAAAGATGACAATGC
TGTGGATCCTTTCTCCAGAACAATTCGTATGTTTGAACATTGAACCCTTTGGGGCAGGGG
CAGTTTTCAGAACCCTGAAACCTGTCTAAGGAGCATGTACTAAGATGAATTTCCTGGATT
TTACTTCACGAATGAGAAATTATGTTTACTAAAAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATCCTGGCCTCAGGTCAAGAGTGCTTTCTGATGGCTGGAAGATTCTGGATTGTTGCCCA
TCCCTGATCATGTGCAGAGGGAAATGCAGAACTACCTGCCTCAAATGTAGCACATTTATC
TCTTTTCTGCCCTCCACTTGCTCACCTCTCATGTGGTAGCCCCAGCAGCATGTTGCTCAT
CATTTTGAGCCGTGCTAGATGAGATACTTTTGTTGAACAGTCTGTTTTTTACACTAGAAG
TGGAATGTATCCTCTAATTTGAGGCAAGAAATTTTGGATGGCTGAAAGGGAAGCTAATTT
TCCAAACTAAGGCATAACCAGAATTAGCTGAAAAGGCTTGGAATGAATTACTCAAGAAAA
AGGATAAAGTGAAGATGGTTAAGGATGTGTGTATACCAAATCCTTTGCAGAGGATTAAAT
AGAAAGACGTGGTTTATACCAGGTTCCAGGTACAGAGGGAGTGGAGGCTCTGAGATGAGT
CAAGCCAAGTCTCAGTAGTCTCTTAGGTGGACAGGAGGACTCTGACACTCAGTAACAGAG
CCCGGTTTGGCCAGAAAAACAGCCCTCAGAAAACATAGGAGTGAAATGGGCTTAGATCAA
GAGAAAGTGAGAAGACCAGGCAGGTAAACAGCAGCAAATGTTTGCATGAATGAAATTGTA
ATGGCAAACATTTCAGTAAACTGGATTCATTGTTGTCCACAAAAAGAACCTACATTTGTG
ATTTTGCTATTTGTTAAGCAGTTTCCCTTCTTGAGTTCTTGAGAAGTCTGCTGCTTGGCA
TTCCTCTAGTATTACAGAAAGCCTACCCAGATTTCCATAATCAAAAACAAGTGTTAAGCA
CTGCTAATCATTTTCCTGCAATTCTTGCTGTTGGATTTATTCTTTAGTTGAGTTTAGTTC
TTTAAGGGACTCAAAATAATTTGGGGTCTAGTAGCCAAGGATGAGACCAGCCCTGCTTCT
TACTAGAGCATTGATTCTTGAAGAGAGGTTGGTGGTCCCTTTAAAAAAAGATGACAATGC
TGTGGATCCTTTCTCCAGAACAATTCGTATGTTTGAACATTGAACCCTTTGGGGCAGGGG
CAGTTTTCAGAACCCTGAAACCTGTCTAAGGAGCATGTACTAAGATGAATTTCCTGGATT
TTACTTCACGAATGAGAAATTATGTTTACTAAAAGG

Predicted RNA structure(s): 2 entry(ies)

More info

Predicted RNA structure(s): 2 entry(ies)

Help | Less info


               
               707-826, - strand, RNAz p=0.53571
               

               
               902-1016, - strand, RNAz p=0.997648

Predicted RNA structure(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               707-826, - strand, RNAz p=0.53571
               

               
               902-1016, - strand, RNAz p=0.997648

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               25-1163, gnl|bosTau2|chr7 (6983533-6984686)
               

               
               25-1163, gnl|Hg17|chr19 (15293331-15291799)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-1163, gnl|bosTau2|chr7 (6983533-6984686)
               

               
               25-1163, gnl|Hg17|chr19 (15293331-15291799)

	707-826, - strand, RNAz p=0.53571
	902-1016, - strand, RNAz p=0.997648

	25-1163, gnl\|bosTau2\|chr7 (6983533-6984686)
	25-1163, gnl\|Hg17\|chr19 (15293331-15291799)