Non-Coding RNA Search

Ss1.1-Lng1-LNG010027H03.5

Sequence:


               
               GAGCTTGGTCTAAGGGTAAAAGAATATTTGTGATGTGGCTTACTAGAGCTGGGAAGAACT
GAACAAAACTAGAATATGAAAGATCTTATTAGTGTTATTTAGATCACACTGAAGCCTTAA
GACTTAAGAACTGGCTTTAGGGCAGATTCTCCCTTAATGGTATGAAGTTATGGAAAGAGA
TAAGAATATCCCTTTTCTCCCCCCCCCCATATTTCAACCTGAGTAACAGTAATTTTTTAT
ATACTCAACCTCTCTGAGTTAGGTTCATATTCTTTCCTGGGTCTGCTGCTGTTCACCCTT
GCTCTTTGAGATTTCAGATTGCTACCATCCCCTACGTAGGTAAAATGGGAGCCCTTTCCA
AGGCTGTTTTTCTAGAACAGTTCTCTCTTCTTGTCCCCACCTTTCCTGTCTTTAAAAAAA
AAAAGAGTTTCCTCCTCTCTAGTATGAAGCACTAATGTTTTACATTGTTCTCATTTGCTC
TGGGTGTTTGTGTTCTTGTAAGCATTTTTCACAGTTCTAAGCTATGTAGGAATGGACTTT
GCCCAGGAGTTTTATCATTAATGACAGTCCTTGAAAGCCGGAGACTGAGCAGCAGCGTGT
GGGACTTTGTCAGCAGCTCAATGGCCTCCCCGAAGAAGAAACTTCAAGGTCTCGTGGCCG
CGACCATCACGCCGATGACTGAGCATGGGTAACTATGGCTTGGGACTAAAGGGCTCTCCC
TCCACTGCAGAGGACGGTAGGTCTCTATAGCAGGTTGCTTCGACTTCGCGGCTCTGTGGC
ACCATTGCCAAGTGGCAGCTTCCGCCAGTCATCCCCCCCTCACTCTCTCTGGCCCCAAGT
CAGAGAAGAGATCTCTACCTCGCAAGCAGTGCAGAAAGAGACAAGGTAAGATATGGCGGC
TCACCCTCCTCCCAGTGTCTAGCTCCACAAAGCAAATTCTCCTTGGATTTCATTGGAACC
CTGGCCTTCCCACATAAGGCTGGTGGAGTTGGGTGAGGAGAGTCTCATTTTAGCAGGATT
TGATGTCAATCTCTGGCCTCTAAACCCTGTCTCCAGACCATTCATAGACATGATGAAAAT
GTCCTACCCAGAGCAAAGTGGGGAAGGTGGCTGCCAGATGGACACCTTAAGGCATGTTTT
ACAGTCTCATTTCAACATGGGTTAGGAGTTCCCATTGTGGCTTGGCTGGTTAAGGACCCA
GCATTGTCTCTGTGAGGATGCAGGTTCCATCCCTGGCCTCACTCAGTGTGTTAAGAATCT
GGCATTGACGCAAACTCCACCATAGGTTGCAGGTGTGGTTTGGATCCAGCGTGGCTGTGG
CTGCTTTTCCAGATTCTTCTCTGTTTCCCAAATACCTCTGACCCTGTTGCCTCTATTACA
CTATTTCCTCTTTTTGCATGAATTCTTTTCTAAGATCCTCACTTTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCTTGGTCTAAGGGTAAAAGAATATTTGTGATGTGGCTTACTAGAGCTGGGAAGAACT
GAACAAAACTAGAATATGAAAGATCTTATTAGTGTTATTTAGATCACACTGAAGCCTTAA
GACTTAAGAACTGGCTTTAGGGCAGATTCTCCCTTAATGGTATGAAGTTATGGAAAGAGA
TAAGAATATCCCTTTTCTCCCCCCCCCCATATTTCAACCTGAGTAACAGTAATTTTTTAT
ATACTCAACCTCTCTGAGTTAGGTTCATATTCTTTCCTGGGTCTGCTGCTGTTCACCCTT
GCTCTTTGAGATTTCAGATTGCTACCATCCCCTACGTAGGTAAAATGGGAGCCCTTTCCA
AGGCTGTTTTTCTAGAACAGTTCTCTCTTCTTGTCCCCACCTTTCCTGTCTTTAAAAAAA
AAAAGAGTTTCCTCCTCTCTAGTATGAAGCACTAATGTTTTACATTGTTCTCATTTGCTC
TGGGTGTTTGTGTTCTTGTAAGCATTTTTCACAGTTCTAAGCTATGTAGGAATGGACTTT
GCCCAGGAGTTTTATCATTAATGACAGTCCTTGAAAGCCGGAGACTGAGCAGCAGCGTGT
GGGACTTTGTCAGCAGCTCAATGGCCTCCCCGAAGAAGAAACTTCAAGGTCTCGTGGCCG
CGACCATCACGCCGATGACTGAGCATGGGTAACTATGGCTTGGGACTAAAGGGCTCTCCC
TCCACTGCAGAGGACGGTAGGTCTCTATAGCAGGTTGCTTCGACTTCGCGGCTCTGTGGC
ACCATTGCCAAGTGGCAGCTTCCGCCAGTCATCCCCCCCTCACTCTCTCTGGCCCCAAGT
CAGAGAAGAGATCTCTACCTCGCAAGCAGTGCAGAAAGAGACAAGGTAAGATATGGCGGC
TCACCCTCCTCCCAGTGTCTAGCTCCACAAAGCAAATTCTCCTTGGATTTCATTGGAACC
CTGGCCTTCCCACATAAGGCTGGTGGAGTTGGGTGAGGAGAGTCTCATTTTAGCAGGATT
TGATGTCAATCTCTGGCCTCTAAACCCTGTCTCCAGACCATTCATAGACATGATGAAAAT
GTCCTACCCAGAGCAAAGTGGGGAAGGTGGCTGCCAGATGGACACCTTAAGGCATGTTTT
ACAGTCTCATTTCAACATGGGTTAGGAGTTCCCATTGTGGCTTGGCTGGTTAAGGACCCA
GCATTGTCTCTGTGAGGATGCAGGTTCCATCCCTGGCCTCACTCAGTGTGTTAAGAATCT
GGCATTGACGCAAACTCCACCATAGGTTGCAGGTGTGGTTTGGATCCAGCGTGGCTGTGG
CTGCTTTTCCAGATTCTTCTCTGTTTCCCAAATACCTCTGACCCTGTTGCCTCTATTACA
CTATTTCCTCTTTTTGCATGAATTCTTTTCTAAGATCCTCACTTTCCT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               51-773, gnl|bosTau2|chr16 (45452124-45451415)
               

               
               51-773, gnl|Hg17|chr1 (179494425-179495353)
               


               
               812-1164, gnl|bosTau2|chr16 (45451414-45451059)
               

               
               812-1164, gnl|Hg17|chr1 (179495354-179495769)
               


               
               1321-1428, gnl|bosTau2|chr16 (45450065-45449954)
               

               
               1321-1428, gnl|Hg17|chr1 (179496841-179496945)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-773, gnl|bosTau2|chr16 (45452124-45451415)
               

               
               51-773, gnl|Hg17|chr1 (179494425-179495353)
               


               
               812-1164, gnl|bosTau2|chr16 (45451414-45451059)
               

               
               812-1164, gnl|Hg17|chr1 (179495354-179495769)
               


               
               1321-1428, gnl|bosTau2|chr16 (45450065-45449954)
               

               
               1321-1428, gnl|Hg17|chr1 (179496841-179496945)

	51-773, gnl\|bosTau2\|chr16 (45452124-45451415)
	51-773, gnl\|Hg17\|chr1 (179494425-179495353)

	812-1164, gnl\|bosTau2\|chr16 (45451414-45451059)
	812-1164, gnl\|Hg17\|chr1 (179495354-179495769)

	1321-1428, gnl\|bosTau2\|chr16 (45450065-45449954)
	1321-1428, gnl\|Hg17\|chr1 (179496841-179496945)