Non-Coding RNA Search

Ss1.1-Lng1-LNG010060F05.5

Sequence:


               
               TGTTATTAAATTCATCCAGCAACTCAAGCCAGAGATTAGCTGTGTGGACTCCATTTCCAA
TTGGGAGTTTCCTCTAGGTTTAGAAATAAACAGATCATAAAACCGAGGTACAAACACAGC
TGTTGACAGTTTTCAACTGAAATAAATTTGAATGGAAGAAGAATGCTTCTAAATGATGAT
AAAATTTAAATACCAAACTTAGGCCTTGGAAATTTTTTCTTTCTTATTCAGGTCCTTTCC
AAGTAGAAGTTAATTAATAATTACGGTAAATCCAAACACTCTTGGCTGGCAATGGAAGAT
GATTCCACCTCTGAAGTTCAGATTTGGAGAGGGGTCTGAGTGATGCTGATAACCAAGCCA
AAGTGAAACGTTAACCCCTTCACATGCCGAGGCTCAGTGATGGGGGAGGAGAGGGCAGAG
GAGCAGGGCAGGCAGAAATGCCCTCTGTATTTCTTGGAAGGACTAACACATTGTCTTGAA
ACGTAGATAATCAGGTATCTACCTAGAACTCAATAAATACTGCAACATTTTAGGCTTATT
ACCTATCTGCCTCCACTGAATTTTGCTTTCCACTTTGTTTAGGACACAATTCATTCCAGC
ATAGGGTCTGAAAATGCTGTGACTAAGTCGTTTAAAGGTTTCAGTTTCAGAAAGTAGACA
GGACTCTTCAGTAGCAATAGTTTTCTCTTAAGCACAGTTAAGAGAAAGTAACTGTTAGTG
CTGGCAAATACTCAAAGACGCTTTTACCATAAATTTTGGACATTTTGCTCATGTCCCAAA
TTTAAGCTGAGGCCACTTTTGTATTTTTGGACAAGGCCAGTGTAATGGCTCTATCCTTTT
AAAAGCCCAGTGAGATACAGCCTTTGCTTGGTGTGTGTTAGAACCGCAAAGGAATACTGT
TATTTTGAATTTCAGAGATAGTGACCCTCCAGAGGCTTCTAAGCGGGCTGATTTTGCGTT
GAATCCCTGAAATACTCTTGGGCATCAGTATCGTCTGTCTGACAAGGAGGTGAGCTGGTG
AGGTTTTGCCACCAGCTGTCTAATCACGTTGCCTAAGCTTACTAACTCCTCTAAACTTGA
GCTTTCTCGCCTGTAAAGTGAGCATAATATTTCCTTTATCCAGTGTGTAAAATACTCACT
TCAATTCCTGATACAGAAAATGCCTGAATGATGGGGTTATGGCGAAGCCAGTCATGTTGG
GGACCTGTCACAGGGAACACATAGTTTCAACAGCTCAGTAACAAACACCGGGGCACTTAG
CATGGATAATTTTTGCCCTTAGGTTCATCAACTCAGTTGTTTAATATAGGACATGTATGT
GGCTGCAGATCAGCTTATGTAGCAAAAGGTTTAGTTGGTTACTGTCTTATCCATGCATCA
CTTATCTCTGCATTTCAGTTAGATACTCAAGAAATGGACCCTCGGAGTTCCCGTCGTGGC
TCAATGGTTAACGAATCCGCCTAGGAACCATGAGGTTGTGGGTTCTATCCCTGGCCTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTATTAAATTCATCCAGCAACTCAAGCCAGAGATTAGCTGTGTGGACTCCATTTCCAA
TTGGGAGTTTCCTCTAGGTTTAGAAATAAACAGATCATAAAACCGAGGTACAAACACAGC
TGTTGACAGTTTTCAACTGAAATAAATTTGAATGGAAGAAGAATGCTTCTAAATGATGAT
AAAATTTAAATACCAAACTTAGGCCTTGGAAATTTTTTCTTTCTTATTCAGGTCCTTTCC
AAGTAGAAGTTAATTAATAATTACGGTAAATCCAAACACTCTTGGCTGGCAATGGAAGAT
GATTCCACCTCTGAAGTTCAGATTTGGAGAGGGGTCTGAGTGATGCTGATAACCAAGCCA
AAGTGAAACGTTAACCCCTTCACATGCCGAGGCTCAGTGATGGGGGAGGAGAGGGCAGAG
GAGCAGGGCAGGCAGAAATGCCCTCTGTATTTCTTGGAAGGACTAACACATTGTCTTGAA
ACGTAGATAATCAGGTATCTACCTAGAACTCAATAAATACTGCAACATTTTAGGCTTATT
ACCTATCTGCCTCCACTGAATTTTGCTTTCCACTTTGTTTAGGACACAATTCATTCCAGC
ATAGGGTCTGAAAATGCTGTGACTAAGTCGTTTAAAGGTTTCAGTTTCAGAAAGTAGACA
GGACTCTTCAGTAGCAATAGTTTTCTCTTAAGCACAGTTAAGAGAAAGTAACTGTTAGTG
CTGGCAAATACTCAAAGACGCTTTTACCATAAATTTTGGACATTTTGCTCATGTCCCAAA
TTTAAGCTGAGGCCACTTTTGTATTTTTGGACAAGGCCAGTGTAATGGCTCTATCCTTTT
AAAAGCCCAGTGAGATACAGCCTTTGCTTGGTGTGTGTTAGAACCGCAAAGGAATACTGT
TATTTTGAATTTCAGAGATAGTGACCCTCCAGAGGCTTCTAAGCGGGCTGATTTTGCGTT
GAATCCCTGAAATACTCTTGGGCATCAGTATCGTCTGTCTGACAAGGAGGTGAGCTGGTG
AGGTTTTGCCACCAGCTGTCTAATCACGTTGCCTAAGCTTACTAACTCCTCTAAACTTGA
GCTTTCTCGCCTGTAAAGTGAGCATAATATTTCCTTTATCCAGTGTGTAAAATACTCACT
TCAATTCCTGATACAGAAAATGCCTGAATGATGGGGTTATGGCGAAGCCAGTCATGTTGG
GGACCTGTCACAGGGAACACATAGTTTCAACAGCTCAGTAACAAACACCGGGGCACTTAG
CATGGATAATTTTTGCCCTTAGGTTCATCAACTCAGTTGTTTAATATAGGACATGTATGT
GGCTGCAGATCAGCTTATGTAGCAAAAGGTTTAGTTGGTTACTGTCTTATCCATGCATCA
CTTATCTCTGCATTTCAGTTAGATACTCAAGAAATGGACCCTCGGAGTTCCCGTCGTGGC
TCAATGGTTAACGAATCCGCCTAGGAACCATGAGGTTGTGGGTTCTATCCCTGGCCTTGC

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-386, gnl|bosTau2|chr7 (31792678-31793060)
               

               
               1-386, gnl|Hg17|chr14 (99013485-99013132)
               

               
               1-386, gnl|Mm7|chr12 (105696821-105696488)
               


               
               1040-1264, gnl|bosTau2|chr7 (31793117-31793341)
               

               
               1040-1264, gnl|Hg17|chr14 (99012281-99012076)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-386, gnl|bosTau2|chr7 (31792678-31793060)
               

               
               1-386, gnl|Hg17|chr14 (99013485-99013132)
               

               
               1-386, gnl|Mm7|chr12 (105696821-105696488)
               


               
               1040-1264, gnl|bosTau2|chr7 (31793117-31793341)
               

               
               1040-1264, gnl|Hg17|chr14 (99012281-99012076)

	1-386, gnl\|bosTau2\|chr7 (31792678-31793060)
	1-386, gnl\|Hg17\|chr14 (99013485-99013132)
	1-386, gnl\|Mm7\|chr12 (105696821-105696488)

	1040-1264, gnl\|bosTau2\|chr7 (31793117-31793341)
	1040-1264, gnl\|Hg17\|chr14 (99012281-99012076)