Non-Coding RNA Search

Ss1.1-Lng1-LNG010064B10.5

Sequence:


               
               CCTATGTGGAAAAGGATTTGCCAGAGGTTCCTCAGCCCATGCAGGTACATGTTGCCCAGG
CAAATGAAAAGCAGCATCAGCACCACCTTCATAGTTCTGGCTGGACTATAGAACAGGTAC
AAGTAACACTGAAATGACACCAGAGGAGGGAGTCTCCCATCAGAGATAATAAAGTGGCCA
AGGTCAAACGCAAGATTTACTTATCATACCTGCCATGCACAATACACATTAGCTTATTCA
TACACATTAGCTTATTAAACTGAAGTCATTACAATGAAACCTGGACTCACTGGATCAGCT
GCTGTTAATCACTGGATGTAAGTGGGGATTTGGAAGAGATAAGCAAAGTGAAATAGACAT
CACAGGGGGAACTAGAATGCAGTACTCTTGGAAGAATTTAAGAAATAAAGACAGAGGAGT
TCCCATTGTGGCTCAGCAGTAACGAACCCGACTAGTATCCATGGCCTCGCTCAGTGGGTT
AAAGGATCCAGCATTACCATGAGCTGTGGTGTAGGGTACATACTCAGCTCAGATCTGGCG
TTGCCTTGGCTGTGGTGCAGCTCCGATTCAACCCCTAGCCTGAGAACTTCCATATGCTGC
AGGTGTGCACCCCTAAAGAAGAAATATAGACGGAAATGCCCAGGCTGTGCTACAGAAAAA
GAAGAGGTGCAGATCAGGGGCAGACAGCCAGAAAAGTATACTCCAACAAGACTGGTCCCC
AAACAAGTCTTTCCTGCAGGGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTATGTGGAAAAGGATTTGCCAGAGGTTCCTCAGCCCATGCAGGTACATGTTGCCCAGG
CAAATGAAAAGCAGCATCAGCACCACCTTCATAGTTCTGGCTGGACTATAGAACAGGTAC
AAGTAACACTGAAATGACACCAGAGGAGGGAGTCTCCCATCAGAGATAATAAAGTGGCCA
AGGTCAAACGCAAGATTTACTTATCATACCTGCCATGCACAATACACATTAGCTTATTCA
TACACATTAGCTTATTAAACTGAAGTCATTACAATGAAACCTGGACTCACTGGATCAGCT
GCTGTTAATCACTGGATGTAAGTGGGGATTTGGAAGAGATAAGCAAAGTGAAATAGACAT
CACAGGGGGAACTAGAATGCAGTACTCTTGGAAGAATTTAAGAAATAAAGACAGAGGAGT
TCCCATTGTGGCTCAGCAGTAACGAACCCGACTAGTATCCATGGCCTCGCTCAGTGGGTT
AAAGGATCCAGCATTACCATGAGCTGTGGTGTAGGGTACATACTCAGCTCAGATCTGGCG
TTGCCTTGGCTGTGGTGCAGCTCCGATTCAACCCCTAGCCTGAGAACTTCCATATGCTGC
AGGTGTGCACCCCTAAAGAAGAAATATAGACGGAAATGCCCAGGCTGTGCTACAGAAAAA
GAAGAGGTGCAGATCAGGGGCAGACAGCCAGAAAAGTATACTCCAACAAGACTGGTCCCC
AAACAAGTCTTTCCTGCAGGGGAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-119, - strand, RNAz p=0.714812

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-119, - strand, RNAz p=0.714812

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-415, gnl|bosTau2|chr22 (7581312-7581715)
               

               
               1-415, gnl|Hg17|chr3 (42569817-42570216)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-415, gnl|bosTau2|chr22 (7581312-7581715)
               

               
               1-415, gnl|Hg17|chr3 (42569817-42570216)

	1-415, gnl\|bosTau2\|chr22 (7581312-7581715)
	1-415, gnl\|Hg17\|chr3 (42569817-42570216)