Ss1.1-Lng1-LNG010065E07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CATACGGGATCCTCCAGCATGGCGGCGGCGGCGCTGCGGGGAGGCTGGTGCCGCTGCCCG CGGAGATGCTTCAGCAGCGGAGTCCATTTTCTATCCAGACACAACCTAGTGCCACTCCCC CTGGGTACCTATCAGATGCCCTGGCCAAGTGGACAGCAGACCCTGTCCAGATCCTATTCT TCTGGAAATAGGAAAGGCTTTCTCTCCGGCTTGCTAGATAACATCAAACAAGAATTAGCC AAAAACAAAGAAATGAAAGAAAGTATAAAAAAGTTCCGAGATGAGGCCAGAAAGCTGGAA GAGTCTGATGCACTCCAGGAAGCCAGGAGGAAATACAGAACCATTGAATCAGAAACCATG CGGACGGGCGAGGTGATCAGGAAGAAGCTGGGGGAGATCACAGGCACCGTGAAGGAGAGT CTCGACGAAGTCAGTAAAAGTGACCTTGGCCGGAAAATCAAGGAGGGTGTGGAAGAAGCA GCCAAGACCGCCAAGCAGTCGGCTGAGTCGGTGTCCAAAGGTGGGGAGAAGCTTGGCAGG ACTGCCGCCTTCAAAGCCCTCTCGCAGGGGGTGGAGTCTGTGAAGAAGGAGATCGACGAG AGCGTCCTGGGGCAGACCGGGCCCTACCGGCGGCCCGAGCGGCTCAGGAAGAGGAAAGAG TTCGCGGGAGAGAAATTCAAGGAAGAGAAAGTGTTTGAGGCCAACGAGGAGGCGCTGGGG GTCGTGCTGCACAAGGACTCCAAGTGGTATCAACAGTGGAAGGACTTCAGGGACAACAAT GTGGTGTTCAACCGGTTCTTTGAGATGAAGATGAAATACGACGAAAGTGACAATGCCCTC ATTCGGGCGTCCCGCGTGCTGACCGACAAGGTCACAGACTTGCTGGGGGGCCTGTTCTCG AAGACTGAGATGTCAGAGGTGCTCACGGAGATCCTGCGAGTGGACCCCGCCTTCGACAAG GAGCGCTTCCTGCAGCAGTGCGAGAATGACATCATCCCCAATGTCCTGGAGGCTATGATT TCTGGAGAGCTCGACATTCTCAAAGACTGGTGCTATGAAGCTACCTACAGCCAGCTGGCC CACCCAATCCAGCAGGCCAAGGCCCTGGGCCTCCAGTTCCACTCCCGCATCCTGGACATC GACAATATCGAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CATACGGGATCCTCCAGCATGGCGGCGGCGGCGCTGCGGGGAGGCTGGTGCCGCTGCCCG CGGAGATGCTTCAGCAGCGGAGTCCATTTTCTATCCAGACACAACCTAGTGCCACTCCCC CTGGGTACCTATCAGATGCCCTGGCCAAGTGGACAGCAGACCCTGTCCAGATCCTATTCT TCTGGAAATAGGAAAGGCTTTCTCTCCGGCTTGCTAGATAACATCAAACAAGAATTAGCC AAAAACAAAGAAATGAAAGAAAGTATAAAAAAGTTCCGAGATGAGGCCAGAAAGCTGGAA GAGTCTGATGCACTCCAGGAAGCCAGGAGGAAATACAGAACCATTGAATCAGAAACCATG CGGACGGGCGAGGTGATCAGGAAGAAGCTGGGGGAGATCACAGGCACCGTGAAGGAGAGT CTCGACGAAGTCAGTAAAAGTGACCTTGGCCGGAAAATCAAGGAGGGTGTGGAAGAAGCA GCCAAGACCGCCAAGCAGTCGGCTGAGTCGGTGTCCAAAGGTGGGGAGAAGCTTGGCAGG ACTGCCGCCTTCAAAGCCCTCTCGCAGGGGGTGGAGTCTGTGAAGAAGGAGATCGACGAG AGCGTCCTGGGGCAGACCGGGCCCTACCGGCGGCCCGAGCGGCTCAGGAAGAGGAAAGAG TTCGCGGGAGAGAAATTCAAGGAAGAGAAAGTGTTTGAGGCCAACGAGGAGGCGCTGGGG GTCGTGCTGCACAAGGACTCCAAGTGGTATCAACAGTGGAAGGACTTCAGGGACAACAAT GTGGTGTTCAACCGGTTCTTTGAGATGAAGATGAAATACGACGAAAGTGACAATGCCCTC ATTCGGGCGTCCCGCGTGCTGACCGACAAGGTCACAGACTTGCTGGGGGGCCTGTTCTCG AAGACTGAGATGTCAGAGGTGCTCACGGAGATCCTGCGAGTGGACCCCGCCTTCGACAAG GAGCGCTTCCTGCAGCAGTGCGAGAATGACATCATCCCCAATGTCCTGGAGGCTATGATT TCTGGAGAGCTCGACATTCTCAAAGACTGGTGCTATGAAGCTACCTACAGCCAGCTGGCC CACCCAATCCAGCAGGCCAAGGCCCTGGGCCTCCAGTTCCACTCCCGCATCCTGGACATC GACAATATCGAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 413-531, + strand, RNAz p=0.517724 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 413-531, + strand, RNAz p=0.517724 |
| Aligned organism(s): 48 entry(ies) | More info |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
| 165-336, gnl|bosTau2|chr7 (13003774-13003945) | |
| 165-336, gnl|canFam2|chr20 (55624692-55624844) | |
| 165-336, gnl|danRer3|chrNA (52142082-52141922) | |
| 165-336, gnl|dasNov1|scaffold_16868 (8066-7914) | |
| 165-336, gnl|fr1|chrUn (134137580-134137731) | |
| 165-336, gnl|galGal2|chr28 (457425-457599) | |
| 165-336, gnl|hg17|chr19 (7908885-7909059) | |
| 165-336, gnl|Hg17|chr19 (7909083-7908912) | |
| 165-336, gnl|mm7|chr8 (4234112-4234271) | |
| 165-336, gnl|Mm7|chr8 (4234295-4234124) | |
| 165-336, gnl|monDom2|scaffold_136 (1666447-1666290) | |
| 165-336, gnl|panTro1|chr20 (8264538-8264713) | |
| 165-336, gnl|rheMac2|chr19 (7985829-7985654) | |
| 165-336, gnl|rn3|chr12 (1520907-1520746) | |
| 165-336, gnl|tetNig1|chr1 (11649877-11650029) | |
| 165-336, gnl|xenTro1|scaffold_644 (96249-96095) | |
| 413-568, gnl|bosTau2|chr7 (13006164-13006319) | |
| 413-568, gnl|canFam2|chr20 (55622736-55622892) | |
| 413-568, gnl|danRer3|chrNA (52145331-52145172) | |
| 413-568, gnl|dasNov1|scaffold_16868 (10441-10268) | |
| 413-568, gnl|echTel1|scaffold_296314 (22357-22198) | |
| 413-568, gnl|fr1|chrUn (134137170-134137329) | |
| 413-568, gnl|galGal2|chr28 (455599-455765) | |
| 413-568, gnl|hg17|chr19 (7904967-7905126) | |
| 413-568, gnl|Hg17|chr19 (7905128-7904973) | |
| 413-568, gnl|mm7|chr8 (4232123-4232285) | |
| 413-568, gnl|Mm7|chr8 (4232287-4232132) | |
| 413-568, gnl|monDom2|scaffold_136 (1668867-1668708) | |
| 413-568, gnl|panTro1|chr20 (8260626-8260785) | |
| 413-568, gnl|rheMac2|chr19 (7989663-7989504) | |
| 413-568, gnl|rn3|chr12 (1522802-1522640) | |
| 413-568, gnl|tetNig1|chr1 (11649470-11649629) | |
| 413-568, gnl|xenTro1|scaffold_644 (103739-103584) | |
| 886-1012, gnl|bosTau2|chr7 (13008725-13008851) | |
| 886-1012, gnl|canFam2|chr20 (55620556-55620722) | |
| 886-1012, gnl|danRer3|chrNA (52149502-52149368) | |
| 886-1012, gnl|echTel1|scaffold_296314 (24412-24248) | |
| 886-1012, gnl|fr1|chrUn (134136212-134136366) | |
| 886-1012, gnl|galGal2|chr28 (451023-451187) | |
| 886-1012, gnl|hg17|chr19 (7903505-7903673) | |
| 886-1012, gnl|Hg17|chr19 (7903637-7903511) | |
| 886-1012, gnl|mm7|chr8 (4230818-4230980) | |
| 886-1012, gnl|Mm7|chr8 (4230950-4230824) | |
| 886-1012, gnl|monDom2|scaffold_136 (1680895-1680732) | |
| 886-1012, gnl|panTro1|chr20 (8259163-8259331) | |
| 886-1012, gnl|rheMac2|chr19 (7991119-7990953) | |
| 886-1012, gnl|rn3|chr12 (1524317-1524156) | |
| 886-1012, gnl|tetNig1|chr1 (11648507-11648681) |
| Aligned organism(s): 48 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 165-336, gnl|bosTau2|chr7 (13003774-13003945) | |
| 165-336, gnl|canFam2|chr20 (55624692-55624844) | |
| 165-336, gnl|danRer3|chrNA (52142082-52141922) | |
| 165-336, gnl|dasNov1|scaffold_16868 (8066-7914) | |
| 165-336, gnl|fr1|chrUn (134137580-134137731) | |
| 165-336, gnl|galGal2|chr28 (457425-457599) | |
| 165-336, gnl|hg17|chr19 (7908885-7909059) | |
| 165-336, gnl|Hg17|chr19 (7909083-7908912) | |
| 165-336, gnl|mm7|chr8 (4234112-4234271) | |
| 165-336, gnl|Mm7|chr8 (4234295-4234124) | |
| 165-336, gnl|monDom2|scaffold_136 (1666447-1666290) | |
| 165-336, gnl|panTro1|chr20 (8264538-8264713) | |
| 165-336, gnl|rheMac2|chr19 (7985829-7985654) | |
| 165-336, gnl|rn3|chr12 (1520907-1520746) | |
| 165-336, gnl|tetNig1|chr1 (11649877-11650029) | |
| 165-336, gnl|xenTro1|scaffold_644 (96249-96095) | |
| 413-568, gnl|bosTau2|chr7 (13006164-13006319) | |
| 413-568, gnl|canFam2|chr20 (55622736-55622892) | |
| 413-568, gnl|danRer3|chrNA (52145331-52145172) | |
| 413-568, gnl|dasNov1|scaffold_16868 (10441-10268) | |
| 413-568, gnl|echTel1|scaffold_296314 (22357-22198) | |
| 413-568, gnl|fr1|chrUn (134137170-134137329) | |
| 413-568, gnl|galGal2|chr28 (455599-455765) | |
| 413-568, gnl|hg17|chr19 (7904967-7905126) | |
| 413-568, gnl|Hg17|chr19 (7905128-7904973) | |
| 413-568, gnl|mm7|chr8 (4232123-4232285) | |
| 413-568, gnl|Mm7|chr8 (4232287-4232132) | |
| 413-568, gnl|monDom2|scaffold_136 (1668867-1668708) | |
| 413-568, gnl|panTro1|chr20 (8260626-8260785) | |
| 413-568, gnl|rheMac2|chr19 (7989663-7989504) | |
| 413-568, gnl|rn3|chr12 (1522802-1522640) | |
| 413-568, gnl|tetNig1|chr1 (11649470-11649629) | |
| 413-568, gnl|xenTro1|scaffold_644 (103739-103584) | |
| 886-1012, gnl|bosTau2|chr7 (13008725-13008851) | |
| 886-1012, gnl|canFam2|chr20 (55620556-55620722) | |
| 886-1012, gnl|danRer3|chrNA (52149502-52149368) | |
| 886-1012, gnl|echTel1|scaffold_296314 (24412-24248) | |
| 886-1012, gnl|fr1|chrUn (134136212-134136366) | |
| 886-1012, gnl|galGal2|chr28 (451023-451187) | |
| 886-1012, gnl|hg17|chr19 (7903505-7903673) | |
| 886-1012, gnl|Hg17|chr19 (7903637-7903511) | |
| 886-1012, gnl|mm7|chr8 (4230818-4230980) | |
| 886-1012, gnl|Mm7|chr8 (4230950-4230824) | |
| 886-1012, gnl|monDom2|scaffold_136 (1680895-1680732) | |
| 886-1012, gnl|panTro1|chr20 (8259163-8259331) | |
| 886-1012, gnl|rheMac2|chr19 (7991119-7990953) | |
| 886-1012, gnl|rn3|chr12 (1524317-1524156) | |
| 886-1012, gnl|tetNig1|chr1 (11648507-11648681) |