Non-Coding RNA Search

Ss1.1-Lng1-LNG010071B10.5

Sequence:


               
               AAAAATAGGCCTCCAGCATGGGGAGGGTACTAGGTCACGTATCAAGAATCAGAATATCCT
CAGACTTCATGGCAGAAACATAGGAATCAAGAAGACAGTAGTACAATGCTGAAATTCTGA
AGGAAAATGATTACCAACCTAGAATTCTATATGTAGCCAAAGTATACACAGGAATGAGTA
TAAAGTCATTTTCAGAAGCTAAAGATTTAAAAATTTTTACCTGTCACATACCCTTTCTCA
AGAAGCTACTGCAAGGAATATACCATCAAACTTGAAAGGATTAAATCCAGAAGGAGTAAG
ACATGAGATACAGAAAACAGGAGACCCAGCGGGAAAAAAATGATAAGGGTTCACTTGGAG
GAGGATGAAAAGTGATGCCAGGATGACAGCTCTGCATCACATGTGGAGGGCAGCTGAGCC
ACACTGCAGCAGTGTTAGCCGGCACATAGACTATCATCTCTAAGATCCCCAAGTCCATCA
GGTCATCCTTTTAACTGAGGATAGGATGCCCAGAAGAACTTGGCCCATTTCTCATCAGTA
CTTGGCTTGTCTTGAGTGTGTCTCTCCCTTCATGCCTTACTGAGGACTCTCATGGAGGTT
TTAATCTTTTCCCGGAGAGCAGGAGGTAGGCCACTGGGCTTAGAAGCAGAAGTACAGAGC
AGCCTACTCTCCCTGACTGGGCTTCTCCTGCATGTCAGTGCCTGGTCAACTTGCTCTGTG
TCTTGCCAGGCACCCAACTGTGGAAAGCCCTGTGTTTCCCAAGACTTACTCGTGACCTTG
CTTNGAACTTCCTCAGTANGGGCCTTGTCAACTTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAATAGGCCTCCAGCATGGGGAGGGTACTAGGTCACGTATCAAGAATCAGAATATCCT
CAGACTTCATGGCAGAAACATAGGAATCAAGAAGACAGTAGTACAATGCTGAAATTCTGA
AGGAAAATGATTACCAACCTAGAATTCTATATGTAGCCAAAGTATACACAGGAATGAGTA
TAAAGTCATTTTCAGAAGCTAAAGATTTAAAAATTTTTACCTGTCACATACCCTTTCTCA
AGAAGCTACTGCAAGGAATATACCATCAAACTTGAAAGGATTAAATCCAGAAGGAGTAAG
ACATGAGATACAGAAAACAGGAGACCCAGCGGGAAAAAAATGATAAGGGTTCACTTGGAG
GAGGATGAAAAGTGATGCCAGGATGACAGCTCTGCATCACATGTGGAGGGCAGCTGAGCC
ACACTGCAGCAGTGTTAGCCGGCACATAGACTATCATCTCTAAGATCCCCAAGTCCATCA
GGTCATCCTTTTAACTGAGGATAGGATGCCCAGAAGAACTTGGCCCATTTCTCATCAGTA
CTTGGCTTGTCTTGAGTGTGTCTCTCCCTTCATGCCTTACTGAGGACTCTCATGGAGGTT
TTAATCTTTTCCCGGAGAGCAGGAGGTAGGCCACTGGGCTTAGAAGCAGAAGTACAGAGC
AGCCTACTCTCCCTGACTGGGCTTCTCCTGCATGTCAGTGCCTGGTCAACTTGCTCTGTG
TCTTGCCAGGCACCCAACTGTGGAAAGCCCTGTGTTTCCCAAGACTTACTCGTGACCTTG
CTTNGAACTTCCTCAGTANGGGCCTTGTCAACTTCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               538-637, + strand, RNAz p=0.771411

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               538-637, + strand, RNAz p=0.771411

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-440, gnl|bosTau2|chr7 (434185-434624)
               


               
               443-816, gnl|bosTau2|chr7 (3709209-3709593)
               

               
               443-816, gnl|Hg17|chr5 (179658477-179658875)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-440, gnl|bosTau2|chr7 (434185-434624)
               


               
               443-816, gnl|bosTau2|chr7 (3709209-3709593)
               

               
               443-816, gnl|Hg17|chr5 (179658477-179658875)

	4-440, gnl\|bosTau2\|chr7 (434185-434624)

	443-816, gnl\|bosTau2\|chr7 (3709209-3709593)
	443-816, gnl\|Hg17\|chr5 (179658477-179658875)