Ss1.1-Lng1-LNG010074C07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCGCTATGGCTGCAGCTGCGGCGGCCGCAGGCCCGCGGCGGGAGGACTCGAGTCCGCA GTGGACGCCACCCCCGCGCGAGCCGGTCGGAGCAGCGGCCGGGCTGGGCGACTGCGAGGA TGCACCGGTCCGGCCGCTGGGTAAGCCCCGCGGCATCTGCTCGCGCGCCTACTTTCTGGT GCTGATGGTGTTCGTGCATCTGTACCTGGGCAACGTGCTAGCGCTGCTGCTCTTCGTACA CTACAGCAACGGTGACGAGAGCAGCGACCCTGGGCCCCAGCGCCGCACCCAGAGCCCCGG ACCTGCGCCAACCTTGGCTCCCCTCACCCGGCTCGAGGGCATCAAGGTGGGTCATGAGCG CAAGGTCCAGCTGGTTGCCGACAGGGATCACTTCATCCGAACCCTCAGCCTCAAGCCGCT GCTCTTCGAAGTCCCTGGCTTCCTGAGTGATGAGGAGTGTCGGCTCATCATCCACCTGGC ACAGATGAAGGGGTTACAGCGCAGCCAGATCCTGCCCACCGAAGAGTACGAGGAAGCAAT GGGCACAATGCAGATCAGCCAGTTGGACCTCTTCCAGCTGCTGGACCAGAACCATGATGG TCACCTGCAGCTCCGTGAGGTCCTGGCCCAGACTCGCCTGGGAAATGGACGGTGGATGAC TCCAGAGAACATTCAGGAGATGTACTCTGCGATCAAGGCTGACCCTGATGGTGATGGAGT GCTGAGCCTGCAGGAGTTCTCCGACATGGACCTTCGGGACTTTCACAAGTACATGAGGAG CCACAAAGCAGAGTCCAGTGAGCTGGTGCGTAACAGCTACCACACGTGGCTGTACCAGGG TGAAGGTGCCCATCACGTCATGCGTGCCATCCGCCAGAGGTGAGCACTTGAGGCTGTCCT CTCTGGTGCAGGGGGAGAGGACTACCAGGGCCCTTGAAGACCTTGGCTATTAACCAATTC AGGATTAAGTTCCAGTTGTTAGACTAGGATTGGGACCCATTAGGAGACAGATGATTAACA AAGGCCAGTTAACCCTAACTGTGGGCAAACAATATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCGCTATGGCTGCAGCTGCGGCGGCCGCAGGCCCGCGGCGGGAGGACTCGAGTCCGCA GTGGACGCCACCCCCGCGCGAGCCGGTCGGAGCAGCGGCCGGGCTGGGCGACTGCGAGGA TGCACCGGTCCGGCCGCTGGGTAAGCCCCGCGGCATCTGCTCGCGCGCCTACTTTCTGGT GCTGATGGTGTTCGTGCATCTGTACCTGGGCAACGTGCTAGCGCTGCTGCTCTTCGTACA CTACAGCAACGGTGACGAGAGCAGCGACCCTGGGCCCCAGCGCCGCACCCAGAGCCCCGG ACCTGCGCCAACCTTGGCTCCCCTCACCCGGCTCGAGGGCATCAAGGTGGGTCATGAGCG CAAGGTCCAGCTGGTTGCCGACAGGGATCACTTCATCCGAACCCTCAGCCTCAAGCCGCT GCTCTTCGAAGTCCCTGGCTTCCTGAGTGATGAGGAGTGTCGGCTCATCATCCACCTGGC ACAGATGAAGGGGTTACAGCGCAGCCAGATCCTGCCCACCGAAGAGTACGAGGAAGCAAT GGGCACAATGCAGATCAGCCAGTTGGACCTCTTCCAGCTGCTGGACCAGAACCATGATGG TCACCTGCAGCTCCGTGAGGTCCTGGCCCAGACTCGCCTGGGAAATGGACGGTGGATGAC TCCAGAGAACATTCAGGAGATGTACTCTGCGATCAAGGCTGACCCTGATGGTGATGGAGT GCTGAGCCTGCAGGAGTTCTCCGACATGGACCTTCGGGACTTTCACAAGTACATGAGGAG CCACAAAGCAGAGTCCAGTGAGCTGGTGCGTAACAGCTACCACACGTGGCTGTACCAGGG TGAAGGTGCCCATCACGTCATGCGTGCCATCCGCCAGAGGTGAGCACTTGAGGCTGTCCT CTCTGGTGCAGGGGGAGAGGACTACCAGGGCCCTTGAAGACCTTGGCTATTAACCAATTC AGGATTAAGTTCCAGTTGTTAGACTAGGATTGGGACCCATTAGGAGACAGATGATTAACA AAGGCCAGTTAACCCTAACTGTGGGCAAACAATATA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 790-909, - strand, RNAz p=0.517929 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 790-909, - strand, RNAz p=0.517929 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 20-368, gnl|bosTau2|chr22 (39989322-39989672) | |
| 20-368, gnl|Hg17|chr3 (49002697-49003097) | |
| 20-368, gnl|Mm7|chr9 (108310007-108309593) | |
| 432-621, gnl|bosTau2|chr22 (39997764-39997953) | |
| 432-621, gnl|canFam2|chr20 (43163018-43162815) | |
| 432-621, gnl|danRer3|chr24 (16596259-16596455) | |
| 432-621, gnl|dasNov1|scaffold_66300 (4172-3969) | |
| 432-621, gnl|echTel1|scaffold_307167 (995-790) | |
| 432-621, gnl|fr1|chrUn (52639922-52640120) | |
| 432-621, gnl|galGal2|chr12 (11635073-11634870) | |
| 432-621, gnl|hg17|chr3 (49013865-49014068) | |
| 432-621, gnl|Hg17|chr3 (49013878-49014067) | |
| 432-621, gnl|mm7|chr9 (108296609-108296406) | |
| 432-621, gnl|Mm7|chr9 (108296594-108296405) | |
| 432-621, gnl|monDom2|scaffold_5 (76479618-76479411) | |
| 432-621, gnl|panTro1|chr2 (50534111-50534314) | |
| 432-621, gnl|rheMac2|chr2 (87457648-87457445) | |
| 432-621, gnl|rn3|chr8 (113650248-113650045) | |
| 432-621, gnl|tetNig1|chr11 (5305856-5305655) | |
| 432-621, gnl|xenTro1|scaffold_72 (2283714-2283511) | |
| 711-1056, gnl|bosTau2|chr22 (40000186-40000515) | |
| 711-1056, gnl|Hg17|chr3 (49016529-49016899) | |
| 711-1056, gnl|Mm7|chr9 (108294775-108294470) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-368, gnl|bosTau2|chr22 (39989322-39989672) | |
| 20-368, gnl|Hg17|chr3 (49002697-49003097) | |
| 20-368, gnl|Mm7|chr9 (108310007-108309593) | |
| 432-621, gnl|bosTau2|chr22 (39997764-39997953) | |
| 432-621, gnl|canFam2|chr20 (43163018-43162815) | |
| 432-621, gnl|danRer3|chr24 (16596259-16596455) | |
| 432-621, gnl|dasNov1|scaffold_66300 (4172-3969) | |
| 432-621, gnl|echTel1|scaffold_307167 (995-790) | |
| 432-621, gnl|fr1|chrUn (52639922-52640120) | |
| 432-621, gnl|galGal2|chr12 (11635073-11634870) | |
| 432-621, gnl|hg17|chr3 (49013865-49014068) | |
| 432-621, gnl|Hg17|chr3 (49013878-49014067) | |
| 432-621, gnl|mm7|chr9 (108296609-108296406) | |
| 432-621, gnl|Mm7|chr9 (108296594-108296405) | |
| 432-621, gnl|monDom2|scaffold_5 (76479618-76479411) | |
| 432-621, gnl|panTro1|chr2 (50534111-50534314) | |
| 432-621, gnl|rheMac2|chr2 (87457648-87457445) | |
| 432-621, gnl|rn3|chr8 (113650248-113650045) | |
| 432-621, gnl|tetNig1|chr11 (5305856-5305655) | |
| 432-621, gnl|xenTro1|scaffold_72 (2283714-2283511) | |
| 711-1056, gnl|bosTau2|chr22 (40000186-40000515) | |
| 711-1056, gnl|Hg17|chr3 (49016529-49016899) | |
| 711-1056, gnl|Mm7|chr9 (108294775-108294470) |