Ss1.1-Lng1-LNG010075A01.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGACGCGGGGCTTCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCTTG CAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATCGAGCAAGTA ACCGGCAGAAGTTTTGGTGATAAAGATTTTCGGACAGGGTTAGAAAATGGAATCCTTCTC TGCGAGTTGCTGAATGCTATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACC CCCATTGCAGGATTGGACAACATCATATTATTCTTGAGAGGCTGTAAAGAGCTCGGCCTT AAAGAATCTCAACTTTTTGACCCGAGTGACCTACAGGATACATCCAACAGAGTAACAGTC AAGAGCCTTGATTATAGTAGGAAGCTGAAAAACGTCCTAGTAACCATTTACTGGCTGGGC AAAGCAGCAAATAGCTCTGCATCTTATAGCGGGACGACACTGGACCTGAAGGAGTTCGAA GGCTTGCTGGCTCAGATGAGAAAGGAGACTGATGACATTGAGAGTCCCAAACGCAGTATC CGAGACAGCGGCTACATCGACTGCTGGGACTCTGAGCGGAGTGACTCCCTCTCTCCCCCC CGACATGGCAGAGATGATTCCTTCGACAGCCTGGACTCCTTTGGCTCCCGTTCCCGGCAG ACACCTTCGCCCGATGTAGTCCTCAGGGGAAGCAGTGATGGGAGAGGCAGCGACTCTGAA TCCGACTTGCCCCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTCTGCGAGGCGG ACTTCCCACGGTGAGCCGAAATCAGCAGTGCCTTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGACGCGGGGCTTCGCAAATGGCTTGTCCCGCTCTCGGTCTGGAAGCTCTTCAGCCCTTG CAGCCCGAGCCGCCCCCCGAGCCCGCCTTCTCCGAGGCGCAGAAGTGGATCGAGCAAGTA ACCGGCAGAAGTTTTGGTGATAAAGATTTTCGGACAGGGTTAGAAAATGGAATCCTTCTC TGCGAGTTGCTGAATGCTATAAAGCCAGGACTTGTTAAAAAGATCAATAGATTGCCTACC CCCATTGCAGGATTGGACAACATCATATTATTCTTGAGAGGCTGTAAAGAGCTCGGCCTT AAAGAATCTCAACTTTTTGACCCGAGTGACCTACAGGATACATCCAACAGAGTAACAGTC AAGAGCCTTGATTATAGTAGGAAGCTGAAAAACGTCCTAGTAACCATTTACTGGCTGGGC AAAGCAGCAAATAGCTCTGCATCTTATAGCGGGACGACACTGGACCTGAAGGAGTTCGAA GGCTTGCTGGCTCAGATGAGAAAGGAGACTGATGACATTGAGAGTCCCAAACGCAGTATC CGAGACAGCGGCTACATCGACTGCTGGGACTCTGAGCGGAGTGACTCCCTCTCTCCCCCC CGACATGGCAGAGATGATTCCTTCGACAGCCTGGACTCCTTTGGCTCCCGTTCCCGGCAG ACACCTTCGCCCGATGTAGTCCTCAGGGGAAGCAGTGATGGGAGAGGCAGCGACTCTGAA TCCGACTTGCCCCATCGGAAGCTGCCAGATGTGAAGAAGGATGACATGTCTGCGAGGCGG ACTTCCCACGGTGAGCCGAAATCAGCAGTGCCTTTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 255-363, + strand, RNAz p=0.520708 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 255-363, + strand, RNAz p=0.520708 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of AL831962, + |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 255-363, gnl|bosTau2|chr6 (30944066-30944174) | |
| 255-363, gnl|canFam2|chr13 (41766408-41766530) | |
| 255-363, gnl|danRer3|chr1 (15010734-15010856) | |
| 255-363, gnl|dasNov1|scaffold_307 (160856-160734) | |
| 255-363, gnl|echTel1|scaffold_321436 (78345-78467) | |
| 255-363, gnl|fr1|chrUn (69303329-69303216) | |
| 255-363, gnl|galGal2|chr4 (68997103-68996967) | |
| 255-363, gnl|hg17|chr4 (41441855-41441977) | |
| 255-363, gnl|Hg17|chr4 (41441864-41441972) | |
| 255-363, gnl|loxAfr1|scaffold_5814 (46542-46420) | |
| 255-363, gnl|mm7|chr5 (66309182-66309304) | |
| 255-363, gnl|Mm7|chr5 (66309191-66309299) | |
| 255-363, gnl|monDom2|scaffold_26 (6950051-6950173) | |
| 255-363, gnl|oryCun1|scaffold_210433 (106880-106758) | |
| 255-363, gnl|panTro1|chr3 (44127408-44127530) | |
| 255-363, gnl|rheMac2|chr5 (36645434-36645556) | |
| 255-363, gnl|rn3|chr14 (43824968-43824846) | |
| 255-363, gnl|tetNig1|chr20 (1966526-1966404) | |
| 255-363, gnl|xenTro1|scaffold_84 (1298190-1298068) | |
| 503-704, gnl|bosTau2|chr6 (30960162-30960363) | |
| 503-704, gnl|canFam2|chr13 (41779467-41779716) | |
| 503-704, gnl|danRer3|chr1 (15013962-15014205) | |
| 503-704, gnl|dasNov1|scaffold_27831 (9822-9574) | |
| 503-704, gnl|echTel1|scaffold_305626 (11672-11422) | |
| 503-704, gnl|fr1|chrUn (69298326-69298105) | |
| 503-704, gnl|galGal2|chr4 (68986634-68986397) | |
| 503-704, gnl|hg17|chr4 (41456378-41456629) | |
| 503-704, gnl|Hg17|chr4 (41456409-41456610) | |
| 503-704, gnl|loxAfr1|scaffold_5814 (22242-21991) | |
| 503-704, gnl|mm7|chr5 (66324566-66324817) | |
| 503-704, gnl|Mm7|chr5 (66324597-66324798) | |
| 503-704, gnl|monDom2|scaffold_26 (6976176-6976433) | |
| 503-704, gnl|oryCun1|scaffold_210433 (91051-90800) | |
| 503-704, gnl|panTro1|chr3 (44141952-44142203) | |
| 503-704, gnl|rheMac2|chr5 (36660142-36660393) | |
| 503-704, gnl|rn3|chr14 (43811256-43811005) | |
| 503-704, gnl|tetNig1|chr20 (1961643-1961440) | |
| 503-704, gnl|xenTro1|scaffold_84 (1276250-1275999) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 255-363, gnl|bosTau2|chr6 (30944066-30944174) | |
| 255-363, gnl|canFam2|chr13 (41766408-41766530) | |
| 255-363, gnl|danRer3|chr1 (15010734-15010856) | |
| 255-363, gnl|dasNov1|scaffold_307 (160856-160734) | |
| 255-363, gnl|echTel1|scaffold_321436 (78345-78467) | |
| 255-363, gnl|fr1|chrUn (69303329-69303216) | |
| 255-363, gnl|galGal2|chr4 (68997103-68996967) | |
| 255-363, gnl|hg17|chr4 (41441855-41441977) | |
| 255-363, gnl|Hg17|chr4 (41441864-41441972) | |
| 255-363, gnl|loxAfr1|scaffold_5814 (46542-46420) | |
| 255-363, gnl|mm7|chr5 (66309182-66309304) | |
| 255-363, gnl|Mm7|chr5 (66309191-66309299) | |
| 255-363, gnl|monDom2|scaffold_26 (6950051-6950173) | |
| 255-363, gnl|oryCun1|scaffold_210433 (106880-106758) | |
| 255-363, gnl|panTro1|chr3 (44127408-44127530) | |
| 255-363, gnl|rheMac2|chr5 (36645434-36645556) | |
| 255-363, gnl|rn3|chr14 (43824968-43824846) | |
| 255-363, gnl|tetNig1|chr20 (1966526-1966404) | |
| 255-363, gnl|xenTro1|scaffold_84 (1298190-1298068) | |
| 503-704, gnl|bosTau2|chr6 (30960162-30960363) | |
| 503-704, gnl|canFam2|chr13 (41779467-41779716) | |
| 503-704, gnl|danRer3|chr1 (15013962-15014205) | |
| 503-704, gnl|dasNov1|scaffold_27831 (9822-9574) | |
| 503-704, gnl|echTel1|scaffold_305626 (11672-11422) | |
| 503-704, gnl|fr1|chrUn (69298326-69298105) | |
| 503-704, gnl|galGal2|chr4 (68986634-68986397) | |
| 503-704, gnl|hg17|chr4 (41456378-41456629) | |
| 503-704, gnl|Hg17|chr4 (41456409-41456610) | |
| 503-704, gnl|loxAfr1|scaffold_5814 (22242-21991) | |
| 503-704, gnl|mm7|chr5 (66324566-66324817) | |
| 503-704, gnl|Mm7|chr5 (66324597-66324798) | |
| 503-704, gnl|monDom2|scaffold_26 (6976176-6976433) | |
| 503-704, gnl|oryCun1|scaffold_210433 (91051-90800) | |
| 503-704, gnl|panTro1|chr3 (44141952-44142203) | |
| 503-704, gnl|rheMac2|chr5 (36660142-36660393) | |
| 503-704, gnl|rn3|chr14 (43811256-43811005) | |
| 503-704, gnl|tetNig1|chr20 (1961643-1961440) | |
| 503-704, gnl|xenTro1|scaffold_84 (1276250-1275999) |