Ss1.1-Lng1-LNG010075F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGTTTCATGTTGAAGAAAGTCAGTGTGTTAGAAGCTGCAGGAGACCTAAACACAGTCACC ATGAAGCTGGGCTATGTCCTCACGACAGGGGTCTTTTCCTTTCCTCCTCCTATGCTCTGG GCCGCTCAGATGCTACTTGTTGCAGCATCATTTTCTGGTTCTTTGCGGACCATGGCCTCC CCAGCTGCCAGTTTTGATGCACTCCAATGCAAAGTACCTCTCAGCAGCCAGGAGAGCAGG TGCCACATGGATGAGGACTTGACGGACCCGAGGGATGTCGACTTCCAGATCAAGGGCTAC ACTTTCAGTGAACCCTTCCATCTGATTGTGTCCTATGACTGGTTGATCCTCCAAAGTTCA GTCAGGCCCATATTTGAAGGAGACCCACTGGTTCTACGCTGCCAGGCCTGGCAAAACTGG CCGCTGACCCAGATCACCTTTTACCGAGACGGCTCAGCCCTGGGTCCCCCTGGACCTAAC AGGGAATTCTCCATCGCTGTGGCGCAAAAGGCAGACAGTGGGCACTACCACTGCAGTGCT GTCTTCAGGAGCCCTGGTCCTGGGAGCCTAGAAACAGCATCATCTGTGACCATCACAGTT CAAGAACTGTTTCCAACTCCAGTGCTCAGAGCCACACCCTCGGCTGAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGTTTCATGTTGAAGAAAGTCAGTGTGTTAGAAGCTGCAGGAGACCTAAACACAGTCACC ATGAAGCTGGGCTATGTCCTCACGACAGGGGTCTTTTCCTTTCCTCCTCCTATGCTCTGG GCCGCTCAGATGCTACTTGTTGCAGCATCATTTTCTGGTTCTTTGCGGACCATGGCCTCC CCAGCTGCCAGTTTTGATGCACTCCAATGCAAAGTACCTCTCAGCAGCCAGGAGAGCAGG TGCCACATGGATGAGGACTTGACGGACCCGAGGGATGTCGACTTCCAGATCAAGGGCTAC ACTTTCAGTGAACCCTTCCATCTGATTGTGTCCTATGACTGGTTGATCCTCCAAAGTTCA GTCAGGCCCATATTTGAAGGAGACCCACTGGTTCTACGCTGCCAGGCCTGGCAAAACTGG CCGCTGACCCAGATCACCTTTTACCGAGACGGCTCAGCCCTGGGTCCCCCTGGACCTAAC AGGGAATTCTCCATCGCTGTGGCGCAAAAGGCAGACAGTGGGCACTACCACTGCAGTGCT GTCTTCAGGAGCCCTGGTCCTGGGAGCCTAGAAACAGCATCATCTGTGACCATCACAGTT CAAGAACTGTTTCCAACTCCAGTGCTCAGAGCCACACCCTCGGCTGAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 483-602, - strand, RNAz p=0.847836 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 483-602, - strand, RNAz p=0.847836 |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-137, gnl|bosTau2|chr3 (19039806-19039670) | |
| 1-137, gnl|canFam2|chr38 (23962489-23962049) | |
| 1-137, gnl|dasNov1|scaffold_49035 (1192-1625) | |
| 1-137, gnl|echTel1|scaffold_280651 (91725-92153) | |
| 1-137, gnl|hg17|chr1 (158408392-158408834) | |
| 1-137, gnl|Hg17|chr1 (158408656-158408789) | |
| 1-137, gnl|loxAfr1|scaffold_21397 (34741-34302) | |
| 1-137, gnl|mm7|chr1 (170904327-170903898) | |
| 1-137, gnl|Mm7|chr1 (170904075-170903940) | |
| 1-137, gnl|monDom2|scaffold_16 (11229742-11230167) | |
| 1-137, gnl|oryCun1|scaffold_127841 (3318-2899) | |
| 1-137, gnl|panTro1|chr1 (140537695-140538137) | |
| 1-137, gnl|rheMac2|chr1 (140225545-140225987) | |
| 1-137, gnl|rn3|chr13 (86799769-86799351) | |
| 329-602, gnl|bosTau2|chr3 (19035770-19035496) | |
| 329-602, gnl|canFam2|chr38 (23957955-23957615) | |
| 329-602, gnl|dasNov1|scaffold_49035 (3965-4304) | |
| 329-602, gnl|echTel1|scaffold_280651 (96353-96689) | |
| 329-602, gnl|hg17|chr1 (158412491-158412821) | |
| 329-602, gnl|Hg17|chr1 (158412646-158412920) | |
| 329-602, gnl|loxAfr1|scaffold_21397 (30645-30327) | |
| 329-602, gnl|mm7|chr1 (170898552-170898097) | |
| 329-602, gnl|Mm7|chr1 (170898270-170897996) | |
| 329-602, gnl|monDom2|scaffold_16 (11233517-11233838) | |
| 329-602, gnl|oryCun1|scaffold_205982 (97197-96875) | |
| 329-602, gnl|panTro1|chr1 (140541793-140542123) | |
| 329-602, gnl|rheMac2|chr1 (140229964-140230294) | |
| 329-602, gnl|rn3|chr13 (86794658-86794134) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-137, gnl|bosTau2|chr3 (19039806-19039670) | |
| 1-137, gnl|canFam2|chr38 (23962489-23962049) | |
| 1-137, gnl|dasNov1|scaffold_49035 (1192-1625) | |
| 1-137, gnl|echTel1|scaffold_280651 (91725-92153) | |
| 1-137, gnl|hg17|chr1 (158408392-158408834) | |
| 1-137, gnl|Hg17|chr1 (158408656-158408789) | |
| 1-137, gnl|loxAfr1|scaffold_21397 (34741-34302) | |
| 1-137, gnl|mm7|chr1 (170904327-170903898) | |
| 1-137, gnl|Mm7|chr1 (170904075-170903940) | |
| 1-137, gnl|monDom2|scaffold_16 (11229742-11230167) | |
| 1-137, gnl|oryCun1|scaffold_127841 (3318-2899) | |
| 1-137, gnl|panTro1|chr1 (140537695-140538137) | |
| 1-137, gnl|rheMac2|chr1 (140225545-140225987) | |
| 1-137, gnl|rn3|chr13 (86799769-86799351) | |
| 329-602, gnl|bosTau2|chr3 (19035770-19035496) | |
| 329-602, gnl|canFam2|chr38 (23957955-23957615) | |
| 329-602, gnl|dasNov1|scaffold_49035 (3965-4304) | |
| 329-602, gnl|echTel1|scaffold_280651 (96353-96689) | |
| 329-602, gnl|hg17|chr1 (158412491-158412821) | |
| 329-602, gnl|Hg17|chr1 (158412646-158412920) | |
| 329-602, gnl|loxAfr1|scaffold_21397 (30645-30327) | |
| 329-602, gnl|mm7|chr1 (170898552-170898097) | |
| 329-602, gnl|Mm7|chr1 (170898270-170897996) | |
| 329-602, gnl|monDom2|scaffold_16 (11233517-11233838) | |
| 329-602, gnl|oryCun1|scaffold_205982 (97197-96875) | |
| 329-602, gnl|panTro1|chr1 (140541793-140542123) | |
| 329-602, gnl|rheMac2|chr1 (140229964-140230294) | |
| 329-602, gnl|rn3|chr13 (86794658-86794134) |