Ss1.1-Lng1-LNG010079H04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCCAAGGCTCTGGCCCCCGGGGAAGAGGCCCTGTCTCCGAGCCCTACCATGAACCACTTC CAGACCATCCTGACTCAGGTCCGGATGCTGCTGTCCAGCCATCGGCCGAGTCAAGTGCAG GCGCTCCTGGACAACCTCCTGGCGGAGGAGCTTCTCTCCAGGGAGTACCACTACGCCCTG CTCCAGGAGCCTGACGGTGAGGCTCTGGCCAGGAAGATCTCCTTGACACTGCTGGAGAAA GGAGCCCCAGACCTGGCCCTCTTGGGGTGGGTCTGGAGTGCACTGCAGACCCCAGCAGCC GAGAAGGACCCCGGCTACCAGGAACCTGATGTCTTGGCGGGCTCCTGAACAACCTCCTGG GACCAGCCAGAGAAGTGGTTGACTGCTGCTGAGTTAGGCATCCGAAGGCATCATTGGGAA GGCTGAGGGCACCAGGAGAGGCCCCAGGAGGGGCTTCCAGAGTCCGGGAGCTGCCACCTG GCCACATTTCCCCTCCAGAGCTGGGCTTGGCTCCACGCCCAGCGGGGTCCTACCTGCCAG AACCTCAAGGCAGTGGACAGTGCGCCACCATGGAGTTGGGGCCTCTGGAGGGTGGGTACT TGGAGCTTCTCAACAGCAGTGCCGACCCTCTGCAGCTCTACCACCTCTATGACCGGATGG ACCTGGCTGGAGAAGAAGAGATCGAGCTCTGCTCAGAACCTGACACGGACACCATCAACT GCGAACAGTTCAGCAGGCTGTTGTGCGACATGGAAGCAGATGAAGAAACCAGGGAAACTT ACGCCAGTATCGCGGAACTGGACCAGTATGTTTTTCAAGACTCTCAGCTGGAGGGCCTGG GCAAAGACATTTTCATTGAGCACATAGGATTGGAAGAAATGATCAGTGAGAGCGTGGAGG TGCTGGAGGACTCAGGGCGGAAAAGTCAGAAAAGATGTGAGTGAGCGTGTTTCCCCCCCG CCCCCTGCCATCCAACCTCTCCTGGCTTCATTCCTGGCCCTGCCCTGGCTCTAAAACCTC CCAGTCGCATTCCTTGTTAAGCCTTGCCTGCTCTGACCTGGCTTTGGGTGTCCCCCCACC TCTCCTCTCACCACTGCTCCCTCGAGACCCAGAGAGGAAGCAAGTGGCCCAGCAGCAGAT GGTCCCTCTCCTGGTGGGTCTCTGTTTTTGACTGTCATTTCCAAAAGACCTCTGGGCTCT GGCTTCTCTTTCATCCTTAGTTGTCACCCCTGTATTTAAGGGAGGTCTCTTCAAGGACAG TCTTTCCCCAGCAAGATCTGGGTTTGAATTCCAGATCTGCTATTTAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCCAAGGCTCTGGCCCCCGGGGAAGAGGCCCTGTCTCCGAGCCCTACCATGAACCACTTC CAGACCATCCTGACTCAGGTCCGGATGCTGCTGTCCAGCCATCGGCCGAGTCAAGTGCAG GCGCTCCTGGACAACCTCCTGGCGGAGGAGCTTCTCTCCAGGGAGTACCACTACGCCCTG CTCCAGGAGCCTGACGGTGAGGCTCTGGCCAGGAAGATCTCCTTGACACTGCTGGAGAAA GGAGCCCCAGACCTGGCCCTCTTGGGGTGGGTCTGGAGTGCACTGCAGACCCCAGCAGCC GAGAAGGACCCCGGCTACCAGGAACCTGATGTCTTGGCGGGCTCCTGAACAACCTCCTGG GACCAGCCAGAGAAGTGGTTGACTGCTGCTGAGTTAGGCATCCGAAGGCATCATTGGGAA GGCTGAGGGCACCAGGAGAGGCCCCAGGAGGGGCTTCCAGAGTCCGGGAGCTGCCACCTG GCCACATTTCCCCTCCAGAGCTGGGCTTGGCTCCACGCCCAGCGGGGTCCTACCTGCCAG AACCTCAAGGCAGTGGACAGTGCGCCACCATGGAGTTGGGGCCTCTGGAGGGTGGGTACT TGGAGCTTCTCAACAGCAGTGCCGACCCTCTGCAGCTCTACCACCTCTATGACCGGATGG ACCTGGCTGGAGAAGAAGAGATCGAGCTCTGCTCAGAACCTGACACGGACACCATCAACT GCGAACAGTTCAGCAGGCTGTTGTGCGACATGGAAGCAGATGAAGAAACCAGGGAAACTT ACGCCAGTATCGCGGAACTGGACCAGTATGTTTTTCAAGACTCTCAGCTGGAGGGCCTGG GCAAAGACATTTTCATTGAGCACATAGGATTGGAAGAAATGATCAGTGAGAGCGTGGAGG TGCTGGAGGACTCAGGGCGGAAAAGTCAGAAAAGATGTGAGTGAGCGTGTTTCCCCCCCG CCCCCTGCCATCCAACCTCTCCTGGCTTCATTCCTGGCCCTGCCCTGGCTCTAAAACCTC CCAGTCGCATTCCTTGTTAAGCCTTGCCTGCTCTGACCTGGCTTTGGGTGTCCCCCCACC TCTCCTCTCACCACTGCTCCCTCGAGACCCAGAGAGGAAGCAAGTGGCCCAGCAGCAGAT GGTCCCTCTCCTGGTGGGTCTCTGTTTTTGACTGTCATTTCCAAAAGACCTCTGGGCTCT GGCTTCTCTTTCATCCTTAGTTGTCACCCCTGTATTTAAGGGAGGTCTCTTCAAGGACAG TCTTTCCCCAGCAAGATCTGGGTTTGAATTCCAGATCTGCTATTTAAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 164-331, - strand, RNAz p=0.624609 | |
| 1107-1306, + strand, RNAz p=0.99698 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 164-331, - strand, RNAz p=0.624609 | |
| 1107-1306, + strand, RNAz p=0.99698 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 5-331, gnl|bosTau2|chr25 (9497066-9496742) | |
| 5-331, gnl|canFam2|chr6 (34864385-34863842) | |
| 5-331, gnl|dasNov1|scaffold_163992 (1284-752) | |
| 5-331, gnl|echTel1|scaffold_111460 (716-220) | |
| 5-331, gnl|hg17|chr16 (10867446-10867986) | |
| 5-331, gnl|Hg17|chr16 (10867607-10867930) | |
| 5-331, gnl|loxAfr1|scaffold_78856 (9800-10331) | |
| 5-331, gnl|mm7|chr16 (10157512-10158014) | |
| 5-331, gnl|Mm7|chr16 (10157653-10157963) | |
| 5-331, gnl|monDom2|scaffold_17 (33848314-33847782) | |
| 5-331, gnl|oryCun1|scaffold_96940 (7313-6774) | |
| 5-331, gnl|panTro1|chr18 (11197825-11198365) | |
| 5-331, gnl|rheMac2|chr20 (10933277-10933817) | |
| 5-331, gnl|rn3|chr10 (5133505-5133006) | |
| 545-696, gnl|bosTau2|chr25 (9465955-9465804) | |
| 545-696, gnl|canFam2|chr6 (34841825-34841406) | |
| 545-696, gnl|hg17|chr16 (10896492-10896887) | |
| 545-696, gnl|Hg17|chr16 (10896635-10896786) | |
| 545-696, gnl|mm7|chr16 (10179183-10179549) | |
| 545-696, gnl|Mm7|chr16 (10179299-10179450) | |
| 545-696, gnl|panTro1|chr18 (11227893-11228289) | |
| 545-696, gnl|rheMac2|chr20 (10965253-10965647) | |
| 545-696, gnl|rn3|chr10 (5113034-5112672) | |
| 956-1306, gnl|bosTau2|chr25 (9461247-9460888) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 5-331, gnl|bosTau2|chr25 (9497066-9496742) | |
| 5-331, gnl|canFam2|chr6 (34864385-34863842) | |
| 5-331, gnl|dasNov1|scaffold_163992 (1284-752) | |
| 5-331, gnl|echTel1|scaffold_111460 (716-220) | |
| 5-331, gnl|hg17|chr16 (10867446-10867986) | |
| 5-331, gnl|Hg17|chr16 (10867607-10867930) | |
| 5-331, gnl|loxAfr1|scaffold_78856 (9800-10331) | |
| 5-331, gnl|mm7|chr16 (10157512-10158014) | |
| 5-331, gnl|Mm7|chr16 (10157653-10157963) | |
| 5-331, gnl|monDom2|scaffold_17 (33848314-33847782) | |
| 5-331, gnl|oryCun1|scaffold_96940 (7313-6774) | |
| 5-331, gnl|panTro1|chr18 (11197825-11198365) | |
| 5-331, gnl|rheMac2|chr20 (10933277-10933817) | |
| 5-331, gnl|rn3|chr10 (5133505-5133006) | |
| 545-696, gnl|bosTau2|chr25 (9465955-9465804) | |
| 545-696, gnl|canFam2|chr6 (34841825-34841406) | |
| 545-696, gnl|hg17|chr16 (10896492-10896887) | |
| 545-696, gnl|Hg17|chr16 (10896635-10896786) | |
| 545-696, gnl|mm7|chr16 (10179183-10179549) | |
| 545-696, gnl|Mm7|chr16 (10179299-10179450) | |
| 545-696, gnl|panTro1|chr18 (11227893-11228289) | |
| 545-696, gnl|rheMac2|chr20 (10965253-10965647) | |
| 545-696, gnl|rn3|chr10 (5113034-5112672) | |
| 956-1306, gnl|bosTau2|chr25 (9461247-9460888) |