Ss1.1-Lng1-LNG010080C03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCGGCGGCGCGAGCGGCGGCGGCGGCGGTTCCAGCATGAAGAGGAGAGCTGGCCTGGGG GGCAGCATGAGGTCAGTGGTGGGCTTCTTGTCCCAGCGGGGCTTGCATGGGGACCCCCTG CTCACTCAGGACTTTCAGAGGAGACGCCTGCGAGGCTGCAGAAACCTCTACAAGAAGGAC CTCCTCGGCCACTTCGGCTGTGTCAATGCCATTGAATTCTCCAACAATGGAGGCCAGTGG CTGGTCTCAGGAGGAGATGATCGCCGGGTTCTACTATGGCACATGGAACAAGCTATCCAC TCCAGAGTTAAGCCCATACAGCTGAAAGGAGAGCATCATTCCAACATTTTTTGCCTGGCT TTCAACAGTGGGAACACCAAAGTATTCTCTGGAGGAAATGATGAGCAAGTTATCCTCCAT GATGTTGAAAGCAGTGAGACCTTAGATGTGTTTGCGCACGAAGATGCAGTATATGGCTTG TCGGTGAGCCCAGTGAATGACAACATTTTTGCCAGCTCCTCAGATGATGGCCGGGTTCTC ATCTGGGACATCCGGGAATCTCCCCATGGAGAGCCCTTCTGCCTGGCCAACTATCCATCA GCCTTCCACAGTGTCATGTTTAACCCTGTGGAGCCCAGGTTATTGGCCACAGCCAATTCA AAGGAAGGAGTGGGACTCTGGGATATTCGAAAACCTCAGAGTTCTCTCCTGCGCTACGGT GGCAACCTATCCCTCCAAAGTGCCATGAGTGTGCGATTCAACAGCAATGGGACCCAGCTC CTGGCCCTGAGGCGTCGCCTGCCCCCTGTGCTCTATGACATCCACTCCCGCCTGCCTGTC TTCCAGTTTGACAATCAGGGTTACTTCAACTCTTGTACCATGAAAAGCTGCTGTTTTGCA GGAGATCGTGACCAGTACATCCTTTCAGGCTCTGATGACTTCAACCTGTACATGTGGAGA ATTCCTGCAGATCCAGAAGCAGGTGGCATTGGTAGAGTGGTCAATGGAGCCTTCATGGTG CTGAAAGGACATCGGTCAATTGTCAACCAGGTCCGATTTAACCCCCACACCTACATGATC TGCTCTTCTGGCGTAGAAAAGATTATCAAGGTGAGGCACCTTCTTCTTTTGTCCTTTTAG AGAAATTATTGCAATTATAAATGGAAGAAAACTAAGCAACCTATGTAGGACCTCATATCT CAACATATTAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCGGCGGCGCGAGCGGCGGCGGCGGCGGTTCCAGCATGAAGAGGAGAGCTGGCCTGGGG GGCAGCATGAGGTCAGTGGTGGGCTTCTTGTCCCAGCGGGGCTTGCATGGGGACCCCCTG CTCACTCAGGACTTTCAGAGGAGACGCCTGCGAGGCTGCAGAAACCTCTACAAGAAGGAC CTCCTCGGCCACTTCGGCTGTGTCAATGCCATTGAATTCTCCAACAATGGAGGCCAGTGG CTGGTCTCAGGAGGAGATGATCGCCGGGTTCTACTATGGCACATGGAACAAGCTATCCAC TCCAGAGTTAAGCCCATACAGCTGAAAGGAGAGCATCATTCCAACATTTTTTGCCTGGCT TTCAACAGTGGGAACACCAAAGTATTCTCTGGAGGAAATGATGAGCAAGTTATCCTCCAT GATGTTGAAAGCAGTGAGACCTTAGATGTGTTTGCGCACGAAGATGCAGTATATGGCTTG TCGGTGAGCCCAGTGAATGACAACATTTTTGCCAGCTCCTCAGATGATGGCCGGGTTCTC ATCTGGGACATCCGGGAATCTCCCCATGGAGAGCCCTTCTGCCTGGCCAACTATCCATCA GCCTTCCACAGTGTCATGTTTAACCCTGTGGAGCCCAGGTTATTGGCCACAGCCAATTCA AAGGAAGGAGTGGGACTCTGGGATATTCGAAAACCTCAGAGTTCTCTCCTGCGCTACGGT GGCAACCTATCCCTCCAAAGTGCCATGAGTGTGCGATTCAACAGCAATGGGACCCAGCTC CTGGCCCTGAGGCGTCGCCTGCCCCCTGTGCTCTATGACATCCACTCCCGCCTGCCTGTC TTCCAGTTTGACAATCAGGGTTACTTCAACTCTTGTACCATGAAAAGCTGCTGTTTTGCA GGAGATCGTGACCAGTACATCCTTTCAGGCTCTGATGACTTCAACCTGTACATGTGGAGA ATTCCTGCAGATCCAGAAGCAGGTGGCATTGGTAGAGTGGTCAATGGAGCCTTCATGGTG CTGAAAGGACATCGGTCAATTGTCAACCAGGTCCGATTTAACCCCCACACCTACATGATC TGCTCTTCTGGCGTAGAAAAGATTATCAAGGTGAGGCACCTTCTTCTTTTGTCCTTTTAG AGAAATTATTGCAATTATAAATGGAAGAAAACTAAGCAACCTATGTAGGACCTCATATCT CAACATATTAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1020-1139, + strand, RNAz p=0.937939 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1020-1139, + strand, RNAz p=0.937939 |
| Aligned organism(s): 43 entry(ies) | More info |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
| 245-395, gnl|bosTau2|chr10 (55416200-55416049) | |
| 245-395, gnl|canFam2|chr8 (45994348-45994514) | |
| 245-395, gnl|danRer3|chr13 (39089853-39090017) | |
| 245-395, gnl|dasNov1|scaffold_2936 (41868-41702) | |
| 245-395, gnl|echTel1|scaffold_319255 (75949-76115) | |
| 245-395, gnl|fr1|chrUn (2823756-2823578) | |
| 245-395, gnl|galGal2|chr5 (25047569-25047405) | |
| 245-395, gnl|hg17|chr14 (68658682-68658848) | |
| 245-395, gnl|Hg17|chr14 (68658837-68658686) | |
| 245-395, gnl|loxAfr1|scaffold_1445 (22765-22599) | |
| 245-395, gnl|mm7|chr12 (78367336-78367502) | |
| 245-395, gnl|Mm7|chr12 (78367491-78367340) | |
| 245-395, gnl|monDom2|scaffold_8 (85351059-85351225) | |
| 245-395, gnl|oryCun1|scaffold_201061 (12412-12576) | |
| 245-395, gnl|panTro1|chr15 (68331718-68331884) | |
| 245-395, gnl|rheMac2|chr7 (132245213-132245379) | |
| 245-395, gnl|rn3|chr6 (103428821-103428987) | |
| 245-395, gnl|tetNig1|chrUn_random (130136163-130136317) | |
| 430-571, gnl|bosTau2|chr10 (55412541-55412400) | |
| 430-571, gnl|canFam2|chr8 (45990823-45990995) | |
| 430-571, gnl|danRer3|chr13 (39088412-39088559) | |
| 430-571, gnl|dasNov1|scaffold_2936 (46430-46265) | |
| 430-571, gnl|echTel1|scaffold_319255 (73213-73387) | |
| 430-571, gnl|fr1|chrUn (2824112-2823944) | |
| 430-571, gnl|galGal2|chr5 (25053515-25053358) | |
| 430-571, gnl|hg17|chr14 (68654603-68654769) | |
| 430-571, gnl|Hg17|chr14 (68654750-68654609) | |
| 430-571, gnl|loxAfr1|scaffold_1445 (25758-25585) | |
| 430-571, gnl|mm7|chr12 (78361550-78361712) | |
| 430-571, gnl|Mm7|chr12 (78361696-78361555) | |
| 430-571, gnl|monDom2|scaffold_8 (85348999-85349166) | |
| 430-571, gnl|oryCun1|scaffold_201061 (8765-8933) | |
| 430-571, gnl|panTro1|chr15 (68327634-68327800) | |
| 430-571, gnl|rheMac2|chr7 (132240905-132241070) | |
| 430-571, gnl|rn3|chr6 (103424327-103424499) | |
| 430-571, gnl|tetNig1|chrUn_random (130135830-130135977) | |
| 430-571, gnl|xenTro1|scaffold_117 (549298-549127) | |
| 700-932, gnl|bosTau2|chr10 (55391179-55390946) | |
| 700-932, gnl|Hg17|chr14 (68628359-68628126) | |
| 700-932, gnl|Mm7|chr12 (78339520-78339288) | |
| 980-1207, gnl|bosTau2|chr10 (55359012-55358783) | |
| 980-1207, gnl|Hg17|chr14 (68598984-68598757) | |
| 980-1207, gnl|Mm7|chr12 (78311237-78311009) |
| Aligned organism(s): 43 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 245-395, gnl|bosTau2|chr10 (55416200-55416049) | |
| 245-395, gnl|canFam2|chr8 (45994348-45994514) | |
| 245-395, gnl|danRer3|chr13 (39089853-39090017) | |
| 245-395, gnl|dasNov1|scaffold_2936 (41868-41702) | |
| 245-395, gnl|echTel1|scaffold_319255 (75949-76115) | |
| 245-395, gnl|fr1|chrUn (2823756-2823578) | |
| 245-395, gnl|galGal2|chr5 (25047569-25047405) | |
| 245-395, gnl|hg17|chr14 (68658682-68658848) | |
| 245-395, gnl|Hg17|chr14 (68658837-68658686) | |
| 245-395, gnl|loxAfr1|scaffold_1445 (22765-22599) | |
| 245-395, gnl|mm7|chr12 (78367336-78367502) | |
| 245-395, gnl|Mm7|chr12 (78367491-78367340) | |
| 245-395, gnl|monDom2|scaffold_8 (85351059-85351225) | |
| 245-395, gnl|oryCun1|scaffold_201061 (12412-12576) | |
| 245-395, gnl|panTro1|chr15 (68331718-68331884) | |
| 245-395, gnl|rheMac2|chr7 (132245213-132245379) | |
| 245-395, gnl|rn3|chr6 (103428821-103428987) | |
| 245-395, gnl|tetNig1|chrUn_random (130136163-130136317) | |
| 430-571, gnl|bosTau2|chr10 (55412541-55412400) | |
| 430-571, gnl|canFam2|chr8 (45990823-45990995) | |
| 430-571, gnl|danRer3|chr13 (39088412-39088559) | |
| 430-571, gnl|dasNov1|scaffold_2936 (46430-46265) | |
| 430-571, gnl|echTel1|scaffold_319255 (73213-73387) | |
| 430-571, gnl|fr1|chrUn (2824112-2823944) | |
| 430-571, gnl|galGal2|chr5 (25053515-25053358) | |
| 430-571, gnl|hg17|chr14 (68654603-68654769) | |
| 430-571, gnl|Hg17|chr14 (68654750-68654609) | |
| 430-571, gnl|loxAfr1|scaffold_1445 (25758-25585) | |
| 430-571, gnl|mm7|chr12 (78361550-78361712) | |
| 430-571, gnl|Mm7|chr12 (78361696-78361555) | |
| 430-571, gnl|monDom2|scaffold_8 (85348999-85349166) | |
| 430-571, gnl|oryCun1|scaffold_201061 (8765-8933) | |
| 430-571, gnl|panTro1|chr15 (68327634-68327800) | |
| 430-571, gnl|rheMac2|chr7 (132240905-132241070) | |
| 430-571, gnl|rn3|chr6 (103424327-103424499) | |
| 430-571, gnl|tetNig1|chrUn_random (130135830-130135977) | |
| 430-571, gnl|xenTro1|scaffold_117 (549298-549127) | |
| 700-932, gnl|bosTau2|chr10 (55391179-55390946) | |
| 700-932, gnl|Hg17|chr14 (68628359-68628126) | |
| 700-932, gnl|Mm7|chr12 (78339520-78339288) | |
| 980-1207, gnl|bosTau2|chr10 (55359012-55358783) | |
| 980-1207, gnl|Hg17|chr14 (68598984-68598757) | |
| 980-1207, gnl|Mm7|chr12 (78311237-78311009) |