Ss1.1-Lng1-LNG010084C03.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACCTAGCGACCGCCTGAGCCCACCTCAAATGCTTGCTGATGCTCTACTGCCCCCATGTTC GCTTCTCTGCTGTCGTTACTGCAGGTGTTGTTCCTGATGATCCCTGAGGGGGTCCAGCCT CAGCCTTCTCCGTCCCCGTCTGGAGCAGTGCCTACCCATTTGAACGTGGGGCCAAGGACG CAGGGCGGGACCCTTCAATCCTCCTCAGAGGGGACTGAAACTCCCTGGGCCGTGCCTGGG ACCTCTACAGTGGGCCCTAATGTGGTGACCCCCTCGGCGCCTGGGAATGGGACCGTGGAC GTCTTCCCAGTCTTACCGATCTGTGTCTGTGACTTGACTCCTGGTACCTGCGATATAAAT TGCTGCTGCGACAAGGACTGCTATCTTCTCCATCCGAGGACAGTTTTCTCCTTCTGCCTT CCAGGCAGCGTGAGGTCCTCGAGTTGGGTGTGTGTAGACAACTCTCTTATCTTCAGGAGT AACTCCCCATTTCCTTCAAGAGTTTTCATGGATTCAAATGGAATTAAGCAGTTTTGTGTC CATGTGAACAACTCAAAATTAAACTATTTCCAGAAGCTCCAGAAGGTCAATGCAACCAAC TTCCAGGCCCTGGCTACAGAGTTTGGAGGTGAATCATTCACTTCAACATTCCAAACCCCG TCACCACCACCATTTTACAGGGCTGGGGACCCTATTCTGACTTACTTCCCCAAGTGGTCT ATAATAAGCCTGCTGAGACAGCCTCAGGAGTTGGAGCTGGAGGACTCTGCGCTGAGAGCA ATCCTGCAGGTTTCCTGGAGAGTGAAAGTACAACCTGTGCTCGATTCTTCGAGAATCTGA CAGATAGCTGTACCTTGGAGCCCGCCCTCAATGCTGCCTCTTATTACAACTTCACAGTCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACCTAGCGACCGCCTGAGCCCACCTCAAATGCTTGCTGATGCTCTACTGCCCCCATGTTC GCTTCTCTGCTGTCGTTACTGCAGGTGTTGTTCCTGATGATCCCTGAGGGGGTCCAGCCT CAGCCTTCTCCGTCCCCGTCTGGAGCAGTGCCTACCCATTTGAACGTGGGGCCAAGGACG CAGGGCGGGACCCTTCAATCCTCCTCAGAGGGGACTGAAACTCCCTGGGCCGTGCCTGGG ACCTCTACAGTGGGCCCTAATGTGGTGACCCCCTCGGCGCCTGGGAATGGGACCGTGGAC GTCTTCCCAGTCTTACCGATCTGTGTCTGTGACTTGACTCCTGGTACCTGCGATATAAAT TGCTGCTGCGACAAGGACTGCTATCTTCTCCATCCGAGGACAGTTTTCTCCTTCTGCCTT CCAGGCAGCGTGAGGTCCTCGAGTTGGGTGTGTGTAGACAACTCTCTTATCTTCAGGAGT AACTCCCCATTTCCTTCAAGAGTTTTCATGGATTCAAATGGAATTAAGCAGTTTTGTGTC CATGTGAACAACTCAAAATTAAACTATTTCCAGAAGCTCCAGAAGGTCAATGCAACCAAC TTCCAGGCCCTGGCTACAGAGTTTGGAGGTGAATCATTCACTTCAACATTCCAAACCCCG TCACCACCACCATTTTACAGGGCTGGGGACCCTATTCTGACTTACTTCCCCAAGTGGTCT ATAATAAGCCTGCTGAGACAGCCTCAGGAGTTGGAGCTGGAGGACTCTGCGCTGAGAGCA ATCCTGCAGGTTTCCTGGAGAGTGAAAGTACAACCTGTGCTCGATTCTTCGAGAATCTGA CAGATAGCTGTACCTTGGAGCCCGCCCTCAATGCTGCCTCTTATTACAACTTCACAGTCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 554-669, + strand, RNAz p=0.565598 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 554-669, + strand, RNAz p=0.565598 |
| Aligned organism(s): 47 entry(ies) | More info |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
| 42-203, gnl|bosTau2|chr26 (6641775-6641935) | |
| 42-203, gnl|canFam2|chr28 (12178998-12179330) | |
| 42-203, gnl|dasNov1|scaffold_15183 (20806-20523) | |
| 42-203, gnl|echTel1|scaffold_307820 (7600-7281) | |
| 42-203, gnl|hg17|chr10 (97443392-97443706) | |
| 42-203, gnl|Hg17|chr10 (97443658-97443495) | |
| 42-203, gnl|loxAfr1|scaffold_184 (187581-187891) | |
| 42-203, gnl|mm7|chr19 (40505716-40505992) | |
| 42-203, gnl|Mm7|chr19 (40505942-40505787) | |
| 42-203, gnl|monDom2|scaffold_14 (27122594-27122270) | |
| 42-203, gnl|oryCun1|scaffold_205839 (104887-104544) | |
| 42-203, gnl|panTro1|chr8 (99128552-99128866) | |
| 42-203, gnl|rheMac2|chr9 (95223029-95223343) | |
| 42-203, gnl|rn3|chr1 (245844924-245845212) | |
| 309-436, gnl|bosTau2|chr26 (6642163-6642290) | |
| 309-436, gnl|Hg17|chr10 (97443225-97443098) | |
| 309-436, gnl|Mm7|chr19 (40505566-40505439) | |
| 554-682, gnl|bosTau2|chr26 (6646601-6646729) | |
| 554-682, gnl|canFam2|chr28 (12176191-12176847) | |
| 554-682, gnl|dasNov1|scaffold_1289 (126258-126783) | |
| 554-682, gnl|echTel1|scaffold_307820 (13781-13204) | |
| 554-682, gnl|galGal2|chr6 (33822820-33822130) | |
| 554-682, gnl|hg17|chr10 (97436941-97437514) | |
| 554-682, gnl|Hg17|chr10 (97437466-97437338) | |
| 554-682, gnl|loxAfr1|scaffold_18984 (75023-75614) | |
| 554-682, gnl|mm7|chr19 (40502636-40503167) | |
| 554-682, gnl|Mm7|chr19 (40503122-40502991) | |
| 554-682, gnl|monDom2|scaffold_14 (27138672-27138033) | |
| 554-682, gnl|oryCun1|scaffold_205839 (111470-110883) | |
| 554-682, gnl|panTro1|chr8 (99122108-99122681) | |
| 554-682, gnl|rheMac2|chr9 (95216594-95217169) | |
| 554-682, gnl|rn3|chr1 (245841999-245842516) | |
| 788-900, gnl|bosTau2|chr26 (6647182-6647294) | |
| 788-900, gnl|canFam2|chr28 (12175981-12176190) | |
| 788-900, gnl|dasNov1|scaffold_1289 (126050-126257) | |
| 788-900, gnl|echTel1|scaffold_307820 (13999-13782) | |
| 788-900, gnl|galGal2|chr6 (33823028-33822821) | |
| 788-900, gnl|hg17|chr10 (97436729-97436940) | |
| 788-900, gnl|Hg17|chr10 (97436908-97436796) | |
| 788-900, gnl|loxAfr1|scaffold_18984 (74014-74230) | |
| 788-900, gnl|mm7|chr19 (40502399-40502635) | |
| 788-900, gnl|Mm7|chr19 (40502599-40502487) | |
| 788-900, gnl|monDom2|scaffold_14 (27138885-27138673) | |
| 788-900, gnl|oryCun1|scaffold_205839 (111683-111471) | |
| 788-900, gnl|panTro1|chr8 (99121896-99122107) | |
| 788-900, gnl|rheMac2|chr9 (95216382-95216593) | |
| 788-900, gnl|rn3|chr1 (245841763-245841998) |
| Aligned organism(s): 47 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-203, gnl|bosTau2|chr26 (6641775-6641935) | |
| 42-203, gnl|canFam2|chr28 (12178998-12179330) | |
| 42-203, gnl|dasNov1|scaffold_15183 (20806-20523) | |
| 42-203, gnl|echTel1|scaffold_307820 (7600-7281) | |
| 42-203, gnl|hg17|chr10 (97443392-97443706) | |
| 42-203, gnl|Hg17|chr10 (97443658-97443495) | |
| 42-203, gnl|loxAfr1|scaffold_184 (187581-187891) | |
| 42-203, gnl|mm7|chr19 (40505716-40505992) | |
| 42-203, gnl|Mm7|chr19 (40505942-40505787) | |
| 42-203, gnl|monDom2|scaffold_14 (27122594-27122270) | |
| 42-203, gnl|oryCun1|scaffold_205839 (104887-104544) | |
| 42-203, gnl|panTro1|chr8 (99128552-99128866) | |
| 42-203, gnl|rheMac2|chr9 (95223029-95223343) | |
| 42-203, gnl|rn3|chr1 (245844924-245845212) | |
| 309-436, gnl|bosTau2|chr26 (6642163-6642290) | |
| 309-436, gnl|Hg17|chr10 (97443225-97443098) | |
| 309-436, gnl|Mm7|chr19 (40505566-40505439) | |
| 554-682, gnl|bosTau2|chr26 (6646601-6646729) | |
| 554-682, gnl|canFam2|chr28 (12176191-12176847) | |
| 554-682, gnl|dasNov1|scaffold_1289 (126258-126783) | |
| 554-682, gnl|echTel1|scaffold_307820 (13781-13204) | |
| 554-682, gnl|galGal2|chr6 (33822820-33822130) | |
| 554-682, gnl|hg17|chr10 (97436941-97437514) | |
| 554-682, gnl|Hg17|chr10 (97437466-97437338) | |
| 554-682, gnl|loxAfr1|scaffold_18984 (75023-75614) | |
| 554-682, gnl|mm7|chr19 (40502636-40503167) | |
| 554-682, gnl|Mm7|chr19 (40503122-40502991) | |
| 554-682, gnl|monDom2|scaffold_14 (27138672-27138033) | |
| 554-682, gnl|oryCun1|scaffold_205839 (111470-110883) | |
| 554-682, gnl|panTro1|chr8 (99122108-99122681) | |
| 554-682, gnl|rheMac2|chr9 (95216594-95217169) | |
| 554-682, gnl|rn3|chr1 (245841999-245842516) | |
| 788-900, gnl|bosTau2|chr26 (6647182-6647294) | |
| 788-900, gnl|canFam2|chr28 (12175981-12176190) | |
| 788-900, gnl|dasNov1|scaffold_1289 (126050-126257) | |
| 788-900, gnl|echTel1|scaffold_307820 (13999-13782) | |
| 788-900, gnl|galGal2|chr6 (33823028-33822821) | |
| 788-900, gnl|hg17|chr10 (97436729-97436940) | |
| 788-900, gnl|Hg17|chr10 (97436908-97436796) | |
| 788-900, gnl|loxAfr1|scaffold_18984 (74014-74230) | |
| 788-900, gnl|mm7|chr19 (40502399-40502635) | |
| 788-900, gnl|Mm7|chr19 (40502599-40502487) | |
| 788-900, gnl|monDom2|scaffold_14 (27138885-27138673) | |
| 788-900, gnl|oryCun1|scaffold_205839 (111683-111471) | |
| 788-900, gnl|panTro1|chr8 (99121896-99122107) | |
| 788-900, gnl|rheMac2|chr9 (95216382-95216593) | |
| 788-900, gnl|rn3|chr1 (245841763-245841998) |