Ss1.1-Lng1-LNG010085C07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTGAAGCAGGTGAAAAATTTGGGCCTTATGTGGGAGAGCAGAGGTCAAACCTGAAAGAT CCCAGCTATGGATGGGAGATCTTAGATGAGTTTTGCAATGTGAAGTTCTGCATAGATGCT AGTCAACCAGATGTAGGAAGCTGGCTCAAGTACATCAGGTTCGCTGGCTGTTATGATCAG CACAACCTCGTTGCATGCCAGATAAATGATCAGATATTTTACAGAGTAGTCGCAGACATC GCACCGGGAGAGGAGCTCCTGCTGTTCATGAAGAGTGAAGACTATCCCCATGAAACTATG GCACCGGATATCCACGAAGAACGGCAATACCGCTGTGAGGACTGTGACCAGCTCTTCGAG TCCAAGGCTGAACTAGCAGATCACCAGAAGTTCCCGTGCAGCACCCCTCACTCAGCATTC TCAATGGTGGAAGAAGACTTTCAACAGAAACTCGAGAGTGAAAATGATCTCCGAGAGATA CATGCAATTCAGGAGTGTAAGGAATGTGACCAAGCTTTTCCTGATTTGCAAAGCCTGGAG AAACACATGTTGTCACATACTGAAGAGAGGGAATACAAGTGTGATCAGTGTCCCAAGGCG TTTAACTGGAAGTCCAATTTAATTCGCCACCAGATGTCACATGACAGTGGAAAGCACTAT GAATGCGAAAACTGTGCCAAGCAGGTTTTCACGGACCCTAGCAACCTTCAGCGGCACATC CGCTCTCAGCATGTTGGCGCCCGGGCCCACGCGTGCCCGGAGTGTGGCAAAACATTTGCC ACTTCGTCGGGCCTCAAACAACACAAGCACATCCACAGCAGTGTGAAGCCCTTTATCTGT GAGGTCTGCCATAAATCCTATACTCAGTTTTCAAACCTTTGTCGTCATAAGCGCATGCAT GCTGATTGCAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTGAAGCAGGTGAAAAATTTGGGCCTTATGTGGGAGAGCAGAGGTCAAACCTGAAAGAT CCCAGCTATGGATGGGAGATCTTAGATGAGTTTTGCAATGTGAAGTTCTGCATAGATGCT AGTCAACCAGATGTAGGAAGCTGGCTCAAGTACATCAGGTTCGCTGGCTGTTATGATCAG CACAACCTCGTTGCATGCCAGATAAATGATCAGATATTTTACAGAGTAGTCGCAGACATC GCACCGGGAGAGGAGCTCCTGCTGTTCATGAAGAGTGAAGACTATCCCCATGAAACTATG GCACCGGATATCCACGAAGAACGGCAATACCGCTGTGAGGACTGTGACCAGCTCTTCGAG TCCAAGGCTGAACTAGCAGATCACCAGAAGTTCCCGTGCAGCACCCCTCACTCAGCATTC TCAATGGTGGAAGAAGACTTTCAACAGAAACTCGAGAGTGAAAATGATCTCCGAGAGATA CATGCAATTCAGGAGTGTAAGGAATGTGACCAAGCTTTTCCTGATTTGCAAAGCCTGGAG AAACACATGTTGTCACATACTGAAGAGAGGGAATACAAGTGTGATCAGTGTCCCAAGGCG TTTAACTGGAAGTCCAATTTAATTCGCCACCAGATGTCACATGACAGTGGAAAGCACTAT GAATGCGAAAACTGTGCCAAGCAGGTTTTCACGGACCCTAGCAACCTTCAGCGGCACATC CGCTCTCAGCATGTTGGCGCCCGGGCCCACGCGTGCCCGGAGTGTGGCAAAACATTTGCC ACTTCGTCGGGCCTCAAACAACACAAGCACATCCACAGCAGTGTGAAGCCCTTTATCTGT GAGGTCTGCCATAAATCCTATACTCAGTTTTCAAACCTTTGTCGTCATAAGCGCATGCAT GCTGATTGCAGA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 77-195, - strand, RNAz p=0.87076 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 77-195, - strand, RNAz p=0.87076 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 77-220, gnl|bosTau2|chr1 (63951911-63952054) | |
| 77-220, gnl|canFam2|chr34 (36813185-36813313) | |
| 77-220, gnl|danRer3|chrUn (90544296-90544166) | |
| 77-220, gnl|dasNov1|scaffold_71636 (3973-4101) | |
| 77-220, gnl|echTel1|scaffold_309328 (49669-49541) | |
| 77-220, gnl|fr1|chrUn (260067344-260067467) | |
| 77-220, gnl|galGal2|chr9 (19711954-19711826) | |
| 77-220, gnl|hg17|chr3 (170344177-170344305) | |
| 77-220, gnl|Hg17|chr3 (170344324-170344181) | |
| 77-220, gnl|loxAfr1|scaffold_135041 (4102-4230) | |
| 77-220, gnl|mm7|chr3 (29812237-29812365) | |
| 77-220, gnl|Mm7|chr3 (29812384-29812241) | |
| 77-220, gnl|monDom2|scaffold_52 (3095818-3095690) | |
| 77-220, gnl|oryCun1|scaffold_214451 (44076-44204) | |
| 77-220, gnl|panTro1|chr2 (173823504-173823632) | |
| 77-220, gnl|rheMac2|chr2 (117886456-117886328) | |
| 77-220, gnl|rn3|chr2 (114827491-114827619) | |
| 77-220, gnl|tetNig1|chrUn_random (84091118-84090994) | |
| 77-220, gnl|xenTro1|scaffold_3 (3030647-3030521) | |
| 316-533, gnl|bosTau2|chr1 (63967615-63967832) | |
| 316-533, gnl|Hg17|chr3 (170328551-170328334) | |
| 316-533, gnl|Mm7|chr3 (29796188-29795971) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 77-220, gnl|bosTau2|chr1 (63951911-63952054) | |
| 77-220, gnl|canFam2|chr34 (36813185-36813313) | |
| 77-220, gnl|danRer3|chrUn (90544296-90544166) | |
| 77-220, gnl|dasNov1|scaffold_71636 (3973-4101) | |
| 77-220, gnl|echTel1|scaffold_309328 (49669-49541) | |
| 77-220, gnl|fr1|chrUn (260067344-260067467) | |
| 77-220, gnl|galGal2|chr9 (19711954-19711826) | |
| 77-220, gnl|hg17|chr3 (170344177-170344305) | |
| 77-220, gnl|Hg17|chr3 (170344324-170344181) | |
| 77-220, gnl|loxAfr1|scaffold_135041 (4102-4230) | |
| 77-220, gnl|mm7|chr3 (29812237-29812365) | |
| 77-220, gnl|Mm7|chr3 (29812384-29812241) | |
| 77-220, gnl|monDom2|scaffold_52 (3095818-3095690) | |
| 77-220, gnl|oryCun1|scaffold_214451 (44076-44204) | |
| 77-220, gnl|panTro1|chr2 (173823504-173823632) | |
| 77-220, gnl|rheMac2|chr2 (117886456-117886328) | |
| 77-220, gnl|rn3|chr2 (114827491-114827619) | |
| 77-220, gnl|tetNig1|chrUn_random (84091118-84090994) | |
| 77-220, gnl|xenTro1|scaffold_3 (3030647-3030521) | |
| 316-533, gnl|bosTau2|chr1 (63967615-63967832) | |
| 316-533, gnl|Hg17|chr3 (170328551-170328334) | |
| 316-533, gnl|Mm7|chr3 (29796188-29795971) |