Non-Coding RNA Search

Ss1.1-Lng1-LNG010089A03.5

Sequence:


               
               CTTGGGAACCAAGGGAGAACTGATGGAGGAAGGCTCCTCTAGGGCGCAGCAGGAGACGCG
GTGCGTGCGAGGTGCGCCCTAGGGTGCAGGCTGCTGGCACAGGGGCCCGGCCGGAGCACG
GGCGGGAGGCTTCCATCCGGGCGAGCCTAGTACTGGGCTCTCCACGATCTTCGCGCGGGG
GCATCTTCTCCGCTGTCTGCAGCCCCAAGATCCCACTGCCTCCACTCTGCAGCCCCGGCC
TGTCCCATCCGTTCTCTTTCCTTTTTGGCACTGCCCTTTGCCCTCCCATGGGGTCATCTG
TTTACTCTCCCTTCACTTCCAGTCACCCATAGGCCACCCTCCCTTTACCACCACAGTCCC
ATTTTGTCCTCTCTCCCTTCTCTCCTCACTCTTCACCTCTCCTCGGGGTCGCCTTCTCAG
AGGACTCCGCCGACGGAGATGCTGCGGACTCCGCGGCCAGGGTCTGCCCCCAGGAGAACC
CTCCGTCCACCTTTGCCCCCTCCCCGGGGGCGCGGGAGGCAAGTTTCCGCCCCATCCTTT
CCCCAGTGACAGGACTTGCTGCGGCCACGGCCAGGGAGGAGGAGGGAGGGACGGCCTGGC
TCCCGAGCCCCCTCCCCTGCTCGCGAGCTCGCGCGGTCTGTGTCTTTCGGCAAGTGCGGA
GACGCGGAGGAGGAGGAGGAGGAGGAGGGAGTTGGGGGAGGATCTCCN

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTGGGAACCAAGGGAGAACTGATGGAGGAAGGCTCCTCTAGGGCGCAGCAGGAGACGCG
GTGCGTGCGAGGTGCGCCCTAGGGTGCAGGCTGCTGGCACAGGGGCCCGGCCGGAGCACG
GGCGGGAGGCTTCCATCCGGGCGAGCCTAGTACTGGGCTCTCCACGATCTTCGCGCGGGG
GCATCTTCTCCGCTGTCTGCAGCCCCAAGATCCCACTGCCTCCACTCTGCAGCCCCGGCC
TGTCCCATCCGTTCTCTTTCCTTTTTGGCACTGCCCTTTGCCCTCCCATGGGGTCATCTG
TTTACTCTCCCTTCACTTCCAGTCACCCATAGGCCACCCTCCCTTTACCACCACAGTCCC
ATTTTGTCCTCTCTCCCTTCTCTCCTCACTCTTCACCTCTCCTCGGGGTCGCCTTCTCAG
AGGACTCCGCCGACGGAGATGCTGCGGACTCCGCGGCCAGGGTCTGCCCCCAGGAGAACC
CTCCGTCCACCTTTGCCCCCTCCCCGGGGGCGCGGGAGGCAAGTTTCCGCCCCATCCTTT
CCCCAGTGACAGGACTTGCTGCGGCCACGGCCAGGGAGGAGGAGGGAGGGACGGCCTGGC
TCCCGAGCCCCCTCCCCTGCTCGCGAGCTCGCGCGGTCTGTGTCTTTCGGCAAGTGCGGA
GACGCGGAGGAGGAGGAGGAGGAGGAGGGAGTTGGGGGAGGATCTCCN

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               1-110, + strand, RNAz p=0.821609

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-110, + strand, RNAz p=0.821609

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-672, gnl|bosTau2|chr14 (20418680-20418019)
               

               
               1-672, gnl|Hg17|chr8 (71479333-71478662)
               

               
               1-672, gnl|Mm7|chr1 (13523930-13523330)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-672, gnl|bosTau2|chr14 (20418680-20418019)
               

               
               1-672, gnl|Hg17|chr8 (71479333-71478662)
               

               
               1-672, gnl|Mm7|chr1 (13523930-13523330)

	1-672, gnl\|bosTau2\|chr14 (20418680-20418019)
	1-672, gnl\|Hg17\|chr8 (71479333-71478662)
	1-672, gnl\|Mm7\|chr1 (13523930-13523330)