Ss1.1-Lng1-LNG010092C04.5
|
CTTGTCAATATGGCACTTATTTTTCTTTCATATTTTTTTCTTCTTTGTAATGATAGTCCC
AGGTGCATGAAGCAAAGTTCCTGAAAATAATAATATTAGGGGGCCCAGTGTGAATCTTTT
AATACTCTACGAAGACGTAAATTGATATTTAAGTGTTAGTTGTGGAGTTCTCTTGTGGTG
CAGTGAGTTAAGGATTTGGTGTTTTCTCTGCTGCGGGGAGAGGTCGATCCCTGGCCTGGG
ACCTTCCACATGTCCTGGGCGCAGTCAAAAAGATTAAAAAAAATCCAGGCTGTCCATCAG
ATAGAAATGATTATTATAAGCTGAATTAACAAAAATGAAAAGCTCGGCTTCTGATTTGTT
TTGAATTTTTCTTACCTAACACCAAACCGAATGTTCGATTTTTATTTTTTCTTCCTGGAC
AGAAAGACATTTGGCCAAGACAGGATGGAGTGGATGGAGTGAAAGGAATTTTTAAATGCA
GCAAAGTGTTTGGGAAAAAATAGGCTTTTGTGCATCCTACTGGGAATTTGTTTCATAACA
GAAGTTTCACAATGTGCTGTGTCTGTTTCTCCATGAAATCGGTTGTTGCCGAGTGGAGGG
GCCCAGCAGGAAGGTGTGGGGGGTTATTCTGGACTCTGCACCACTGCAGTGCAAGGCGGG
CAGAGGTGCTGGGATACCCCCGGCCTGGAGTCCCCTCCCTCCACCTGCTGCCTTTGCAGG
GAGTGGGCTGGAGAGGGATAGTGTCTGGGACAGCCCAGCAGCCCTTGGAGAAGCCTGTCA
AGTCCCATCTTCTTGTTGGGGTGACCCCATCACAGGGCACGTTTGAGGACTTTTTCTCTC
CTCAGTAGCCCTAAGAACATGTTCCGGGAGTTCACTGATGGCTCAGTG------------
------------------------------------------------------------
------------AATGTCATGGGTGTGGCAAAAAAAGGGGGGGGGGCGTTCGTGTTGTGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CTTGTCAATATGGCACTTATTTTTCTTTCATATTTTTTTCTTCTTTGTAATGATAGTCCC
AGGTGCATGAAGCAAAGTTCCTGAAAATAATAATATTAGGGGGCCCAGTGTGAATCTTTT
AATACTCTACGAAGACGTAAATTGATATTTAAGTGTTAGTTGTGGAGTTCTCTTGTGGTG
CAGTGAGTTAAGGATTTGGTGTTTTCTCTGCTGCGGGGAGAGGTCGATCCCTGGCCTGGG
ACCTTCCACATGTCCTGGGCGCAGTCAAAAAGATTAAAAAAAATCCAGGCTGTCCATCAG
ATAGAAATGATTATTATAAGCTGAATTAACAAAAATGAAAAGCTCGGCTTCTGATTTGTT
TTGAATTTTTCTTACCTAACACCAAACCGAATGTTCGATTTTTATTTTTTCTTCCTGGAC
AGAAAGACATTTGGCCAAGACAGGATGGAGTGGATGGAGTGAAAGGAATTTTTAAATGCA
GCAAAGTGTTTGGGAAAAAATAGGCTTTTGTGCATCCTACTGGGAATTTGTTTCATAACA
GAAGTTTCACAATGTGCTGTGTCTGTTTCTCCATGAAATCGGTTGTTGCCGAGTGGAGGG
GCCCAGCAGGAAGGTGTGGGGGGTTATTCTGGACTCTGCACCACTGCAGTGCAAGGCGGG
CAGAGGTGCTGGGATACCCCCGGCCTGGAGTCCCCTCCCTCCACCTGCTGCCTTTGCAGG
GAGTGGGCTGGAGAGGGATAGTGTCTGGGACAGCCCAGCAGCCCTTGGAGAAGCCTGTCA
AGTCCCATCTTCTTGTTGGGGTGACCCCATCACAGGGCACGTTTGAGGACTTTTTCTCTC
CTCAGTAGCCCTAAGAACATGTTCCGGGAGTTCACTGATGGCTCAGTG------------
------------------------------------------------------------
------------AATGTCATGGGTGTGGCAAAAAAAGGGGGGGGGGCGTTCGTGTTGTGG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-163, gnl|bosTau2|chr17 (24532140-24531981) |
|
2-163, gnl|canFam2|chr26 (4361142-4360887) |
|
2-163, gnl|dasNov1|scaffold_54809 (5964-5717) |
|
2-163, gnl|hg17|chr12 (129987821-129988108) |
|
2-163, gnl|Hg17|chr12 (129987863-129988024) |
|
2-163, gnl|loxAfr1|scaffold_37769 (10834-10527) |
|
2-163, gnl|mm7|chr5 (128356649-128356912) |
|
2-163, gnl|Mm7|chr5 (128356691-128356830) |
|
2-163, gnl|panTro1|chr10 (133155249-133155536) |
|
2-163, gnl|rheMac2|chr11 (132268525-132268813) |
|
2-163, gnl|rn3|chr12 (28501799-28501536) |
| |
|
281-870, gnl|bosTau2|chr17 (24531993-24531407) |
|
281-870, gnl|Hg17|chr12 (129988012-129988649) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-163, gnl|bosTau2|chr17 (24532140-24531981) |
|
2-163, gnl|canFam2|chr26 (4361142-4360887) |
|
2-163, gnl|dasNov1|scaffold_54809 (5964-5717) |
|
2-163, gnl|hg17|chr12 (129987821-129988108) |
|
2-163, gnl|Hg17|chr12 (129987863-129988024) |
|
2-163, gnl|loxAfr1|scaffold_37769 (10834-10527) |
|
2-163, gnl|mm7|chr5 (128356649-128356912) |
|
2-163, gnl|Mm7|chr5 (128356691-128356830) |
|
2-163, gnl|panTro1|chr10 (133155249-133155536) |
|
2-163, gnl|rheMac2|chr11 (132268525-132268813) |
|
2-163, gnl|rn3|chr12 (28501799-28501536) |
| |
|
281-870, gnl|bosTau2|chr17 (24531993-24531407) |
|
281-870, gnl|Hg17|chr12 (129988012-129988649) |
