Non-Coding RNA Search

Ss1.1-Lng1-LNG010106D08.5

Sequence:


               
               GGGACTGGCACACCCGACCTCATAGGTCTGACAATTTGTGGGCATAACTGCCTCCTGACA
GCAGAGTGGATGTCTGCCAGTAAAATAGTGTGTCGAGTGGGACAGGCCAAGAACGACAAA
GGAGACATTATCGTCACGACCAAATCAGGTGGCAGAGAAACCTCCACAGTCTCGTTCAAG
CTGCTCAAGCCTGAGAAAATAGGTGTTTTGGATCAGTCTGCTGTGTGGGTTGATGAAATG
AATTACTACGACATGCGTACCGACAGGAATAAAGGGATCCCTCCCTTGTCCCTGCGTCCT
GCTAACCCACTGGGCATTGAGATTGAAAAAGGTCAATTTCCCCAGAAGGATCTGGAAGTG
CTGTTTCCTGGGATGAGCGCCGACTTCACAAGTGAGAACTTGTCAGCCGCCTGGTACCTT
ATCGAGAACCACTCCAACACCAGTTTTGAGCAGCTCAAAATGGCAGTCGCCCACCTGAAG
AGACAGGCTAACAAGAAGAGCGAGGGCAGCCTGGCGTACGTGAAAGGCGGACTCAGTACT
TTCTTTGAGGCACAGGACGCCCTCTCAGCCATCCATCAAAAACTGGAAGCAGATGGAACG
GAAAAAGTAGAAGGATCCATGACGCAGAAGCTGGAGAATGTTCTGAACAGAGCAAGCAAT
ACTGCGGACACATTATTTCAAGAAGTCTTAGGTCGAAAGGACAAGGCAGACTCCACAAGA
AATGCACTCACTGTGCTCCAGCGATTTAAGTTTCTTTTCAACCTTCCTCTGAATATTGAA
AGGAATATTCAAAAGGGTGATTATGATGTGGTTATTAACGATTATGAAAAGGCCAAGTCC
CTTTTTGGAAAAACAGAGGTGCAAGTTTTCAAGAAATATTATGCTGAAGTCGAAACACGG
ATTGGAGCTTTAAGAGAATTACTTCTGGATAAGTTGCTTGAGACACCATCAACCTTACAT
GACCAAAAACGTTACATAAGGTACTTGTCTGACCTCCGCGCACCCGGCGACCCCGCGTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGACTGGCACACCCGACCTCATAGGTCTGACAATTTGTGGGCATAACTGCCTCCTGACA
GCAGAGTGGATGTCTGCCAGTAAAATAGTGTGTCGAGTGGGACAGGCCAAGAACGACAAA
GGAGACATTATCGTCACGACCAAATCAGGTGGCAGAGAAACCTCCACAGTCTCGTTCAAG
CTGCTCAAGCCTGAGAAAATAGGTGTTTTGGATCAGTCTGCTGTGTGGGTTGATGAAATG
AATTACTACGACATGCGTACCGACAGGAATAAAGGGATCCCTCCCTTGTCCCTGCGTCCT
GCTAACCCACTGGGCATTGAGATTGAAAAAGGTCAATTTCCCCAGAAGGATCTGGAAGTG
CTGTTTCCTGGGATGAGCGCCGACTTCACAAGTGAGAACTTGTCAGCCGCCTGGTACCTT
ATCGAGAACCACTCCAACACCAGTTTTGAGCAGCTCAAAATGGCAGTCGCCCACCTGAAG
AGACAGGCTAACAAGAAGAGCGAGGGCAGCCTGGCGTACGTGAAAGGCGGACTCAGTACT
TTCTTTGAGGCACAGGACGCCCTCTCAGCCATCCATCAAAAACTGGAAGCAGATGGAACG
GAAAAAGTAGAAGGATCCATGACGCAGAAGCTGGAGAATGTTCTGAACAGAGCAAGCAAT
ACTGCGGACACATTATTTCAAGAAGTCTTAGGTCGAAAGGACAAGGCAGACTCCACAAGA
AATGCACTCACTGTGCTCCAGCGATTTAAGTTTCTTTTCAACCTTCCTCTGAATATTGAA
AGGAATATTCAAAAGGGTGATTATGATGTGGTTATTAACGATTATGAAAAGGCCAAGTCC
CTTTTTGGAAAAACAGAGGTGCAAGTTTTCAAGAAATATTATGCTGAAGTCGAAACACGG
ATTGGAGCTTTAAGAGAATTACTTCTGGATAAGTTGCTTGAGACACCATCAACCTTACAT
GACCAAAAACGTTACATAAGGTACTTGTCTGACCTCCGCGCACCCGGCGACCCCGCGTGG

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61822479|ref|XP_591104.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61822479|ref|XP_591104.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               21-139, + strand, RNAz p=0.685816

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               21-139, + strand, RNAz p=0.685816

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

Help | Less info


               
               21-248, gnl|bosTau2|chr11 (25148957-25149181)

Aligned organism(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               21-248, gnl|bosTau2|chr11 (25148957-25149181)