Ss1.1-Lng1-LNG010106G08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AACAGAGTTTCAGCGCCGCGGTTTCCGGCTCGGAAGAGACTGCTGAGGCGCTGGCGGGCC AGCAACATGGCGCGGTGGGGGAATAAGGCAGCTGTAGTGCTGTGTGTGGATGTAGGCTTT GCCATGAGTAACTCCTTTCCTGGTGAAGAATCCCCATTTGAACTAGCAAAGAAGGTGATA ACCATGTTTGTGCAGCGACAGGTGTTTGCTGAGAGCAAGGATGAAATTGCATTAGTCCTT TTTGGTACAGACGGCACGGAGAATGCCCTCGCTGGTAAGGATCAGTATCAGAACATCACA GTGCATAGACACCTGAAGCTACCAGACTTTGACTTGCTGGAGGACATTGAAAGCAAAATC CAACCAGGTTCTCAACAAGCTGACTTCCTGGATGCCCTCATCGTGTGCATGGATTTGATT CAACAAGAAACTATAGGAAAGAAGTTTGAGAAGAGGCATATTGAAGTGTTCACTGACCTC AGCAGCCCATTCAGCAAAGATCAGCTGGACATTATCATTCATAACTTGAAGAAATCTGGC ATCTCGCTGCAATTCTTTTTGCCTTTCCCAATTGGCAAGGAAGATGGAACTGGGGACAGA GGAGACAGCAGCTTGCGCCCAGACCACCATGGACCCTCCTTTCCTCTGAAAGGAATTACT GAGCAGCAAAAAGAAGGTATTCACATGGTGAAAAAGGTGATGATGTCTCTAGAAGGTGAA GATGGGCTGGATGAAATATATTCCTTTAGTGAGAGTCTGAGACAACTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AACAGAGTTTCAGCGCCGCGGTTTCCGGCTCGGAAGAGACTGCTGAGGCGCTGGCGGGCC AGCAACATGGCGCGGTGGGGGAATAAGGCAGCTGTAGTGCTGTGTGTGGATGTAGGCTTT GCCATGAGTAACTCCTTTCCTGGTGAAGAATCCCCATTTGAACTAGCAAAGAAGGTGATA ACCATGTTTGTGCAGCGACAGGTGTTTGCTGAGAGCAAGGATGAAATTGCATTAGTCCTT TTTGGTACAGACGGCACGGAGAATGCCCTCGCTGGTAAGGATCAGTATCAGAACATCACA GTGCATAGACACCTGAAGCTACCAGACTTTGACTTGCTGGAGGACATTGAAAGCAAAATC CAACCAGGTTCTCAACAAGCTGACTTCCTGGATGCCCTCATCGTGTGCATGGATTTGATT CAACAAGAAACTATAGGAAAGAAGTTTGAGAAGAGGCATATTGAAGTGTTCACTGACCTC AGCAGCCCATTCAGCAAAGATCAGCTGGACATTATCATTCATAACTTGAAGAAATCTGGC ATCTCGCTGCAATTCTTTTTGCCTTTCCCAATTGGCAAGGAAGATGGAACTGGGGACAGA GGAGACAGCAGCTTGCGCCCAGACCACCATGGACCCTCCTTTCCTCTGAAAGGAATTACT GAGCAGCAAAAAGAAGGTATTCACATGGTGAAAAAGGTGATGATGTCTCTAGAAGGTGAA GATGGGCTGGATGAAATATATTCCTTTAGTGAGAGTCTGAGACAACTG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 239-358, - strand, RNAz p=0.589809 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 239-358, - strand, RNAz p=0.589809 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 200-384, gnl|bosTau2|chr2 (58721814-58721998) | |
| 200-384, gnl|canFam2|chr37 (26102912-26103131) | |
| 200-384, gnl|danRer3|chrUn (75500834-75501045) | |
| 200-384, gnl|dasNov1|scaffold_71072 (5527-5308) | |
| 200-384, gnl|echTel1|scaffold_289745 (39205-38986) | |
| 200-384, gnl|fr1|chrUn (101312410-101312617) | |
| 200-384, gnl|galGal2|chr7 (24244343-24244127) | |
| 200-384, gnl|hg17|chr2 (216806878-216807097) | |
| 200-384, gnl|Hg17|chr2 (216806886-216807070) | |
| 200-384, gnl|loxAfr1|scaffold_2066 (17662-17881) | |
| 200-384, gnl|mm7|chr1 (72554240-72554459) | |
| 200-384, gnl|Mm7|chr1 (72554248-72554432) | |
| 200-384, gnl|monDom2|scaffold_39 (5067364-5067143) | |
| 200-384, gnl|oryCun1|scaffold_212962 (186617-186836) | |
| 200-384, gnl|panTro1|chr13 (106982689-106982908) | |
| 200-384, gnl|rheMac2|chr12 (79935740-79935959) | |
| 200-384, gnl|rn3|chr9 (71624280-71624498) | |
| 200-384, gnl|tetNig1|chr2 (12656372-12656167) | |
| 200-384, gnl|xenTro1|scaffold_633 (93213-92994) | |
| 431-557, gnl|bosTau2|chr2 (58723517-58723643) | |
| 431-557, gnl|canFam2|chr37 (26105040-26105188) | |
| 431-557, gnl|danRer3|chrUn (75502065-75502212) | |
| 431-557, gnl|dasNov1|scaffold_71072 (3481-3333) | |
| 431-557, gnl|echTel1|scaffold_289745 (37149-37001) | |
| 431-557, gnl|fr1|chrUn (101312962-101313125) | |
| 431-557, gnl|galGal2|chr7 (24242061-24241925) | |
| 431-557, gnl|hg17|chr2 (216809265-216809413) | |
| 431-557, gnl|Hg17|chr2 (216809268-216809394) | |
| 431-557, gnl|loxAfr1|scaffold_121804 (677-529) | |
| 431-557, gnl|mm7|chr1 (72557294-72557442) | |
| 431-557, gnl|Mm7|chr1 (72557297-72557423) | |
| 431-557, gnl|monDom2|scaffold_39 (5040297-5040149) | |
| 431-557, gnl|oryCun1|scaffold_212962 (189000-189148) | |
| 431-557, gnl|panTro1|chr13 (106985077-106985225) | |
| 431-557, gnl|rheMac2|chr12 (79938434-79938582) | |
| 431-557, gnl|rn3|chr9 (71627286-71627434) | |
| 431-557, gnl|tetNig1|chr2 (12655890-12655747) | |
| 431-557, gnl|xenTro1|scaffold_633 (92341-92203) | |
| 558-749, gnl|bosTau2|chr2 (58726478-58726669) | |
| 558-749, gnl|Hg17|chr2 (216812291-216812482) | |
| 558-749, gnl|Mm7|chr1 (72560841-72561032) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 200-384, gnl|bosTau2|chr2 (58721814-58721998) | |
| 200-384, gnl|canFam2|chr37 (26102912-26103131) | |
| 200-384, gnl|danRer3|chrUn (75500834-75501045) | |
| 200-384, gnl|dasNov1|scaffold_71072 (5527-5308) | |
| 200-384, gnl|echTel1|scaffold_289745 (39205-38986) | |
| 200-384, gnl|fr1|chrUn (101312410-101312617) | |
| 200-384, gnl|galGal2|chr7 (24244343-24244127) | |
| 200-384, gnl|hg17|chr2 (216806878-216807097) | |
| 200-384, gnl|Hg17|chr2 (216806886-216807070) | |
| 200-384, gnl|loxAfr1|scaffold_2066 (17662-17881) | |
| 200-384, gnl|mm7|chr1 (72554240-72554459) | |
| 200-384, gnl|Mm7|chr1 (72554248-72554432) | |
| 200-384, gnl|monDom2|scaffold_39 (5067364-5067143) | |
| 200-384, gnl|oryCun1|scaffold_212962 (186617-186836) | |
| 200-384, gnl|panTro1|chr13 (106982689-106982908) | |
| 200-384, gnl|rheMac2|chr12 (79935740-79935959) | |
| 200-384, gnl|rn3|chr9 (71624280-71624498) | |
| 200-384, gnl|tetNig1|chr2 (12656372-12656167) | |
| 200-384, gnl|xenTro1|scaffold_633 (93213-92994) | |
| 431-557, gnl|bosTau2|chr2 (58723517-58723643) | |
| 431-557, gnl|canFam2|chr37 (26105040-26105188) | |
| 431-557, gnl|danRer3|chrUn (75502065-75502212) | |
| 431-557, gnl|dasNov1|scaffold_71072 (3481-3333) | |
| 431-557, gnl|echTel1|scaffold_289745 (37149-37001) | |
| 431-557, gnl|fr1|chrUn (101312962-101313125) | |
| 431-557, gnl|galGal2|chr7 (24242061-24241925) | |
| 431-557, gnl|hg17|chr2 (216809265-216809413) | |
| 431-557, gnl|Hg17|chr2 (216809268-216809394) | |
| 431-557, gnl|loxAfr1|scaffold_121804 (677-529) | |
| 431-557, gnl|mm7|chr1 (72557294-72557442) | |
| 431-557, gnl|Mm7|chr1 (72557297-72557423) | |
| 431-557, gnl|monDom2|scaffold_39 (5040297-5040149) | |
| 431-557, gnl|oryCun1|scaffold_212962 (189000-189148) | |
| 431-557, gnl|panTro1|chr13 (106985077-106985225) | |
| 431-557, gnl|rheMac2|chr12 (79938434-79938582) | |
| 431-557, gnl|rn3|chr9 (71627286-71627434) | |
| 431-557, gnl|tetNig1|chr2 (12655890-12655747) | |
| 431-557, gnl|xenTro1|scaffold_633 (92341-92203) | |
| 558-749, gnl|bosTau2|chr2 (58726478-58726669) | |
| 558-749, gnl|Hg17|chr2 (216812291-216812482) | |
| 558-749, gnl|Mm7|chr1 (72560841-72561032) |