Non-Coding RNA Search

Ss1.1-LyN1-MLN01A110090.5

Sequence:


               
               TAGCCGATCAGGGCGCGCAGCCCACACGCACCGCGGCTCCGGGCTTGGAGATCCGTGCAG
GTTGGGCTCCCGGACTAGTGGACCGACGCGCGGAAGATCGCGTTCAGGCGCTGTGGGGCC
GGGGTGGGCGGGGGAGGCTGGGCCCCGGGCCTCTGGCTCCACACCCGCATGAGGACGCGA
GTGAAATAGACCAAGGTGGAATTTCTAAGGGAGAAGCTTCGGGGTGGTTTTGGTCCATTT
CTCCCGCGAAGAAGTCGACATGGCGAGCGACTCCCCGGCTCGCAGCCTGGATGAAATCGA
TCTCTCGGCTTTGAGGGATCCTGCAGGGATCTTTGAATTGGTGGAACTTGTTGGCAATGG
AACATATGGACAAGTGTATAAGGGTCGTCATGTCAAAACAGGCCAGCTTGCAGCCATTAA
GGTTATGGATGTCACAGGGGATGAAGAGGAAGAAATCAAACAGGAAATTAACATGTTGAA
GAAATATTCTCATCACCGGAATATTGCTACATACTATGGTGCTTTTATCAAAAAGAACCC
ACCAGGCATGGATGACCAACTTTGGTTGGTGATGGAGTTTTGTGGCGCTGGCTCTGTCAC
TGACCTGATCAAGAACACGAAAGGTAACACATTGAAGGAGGAGTGGATCGCATATATCTG
CAGGGAGATTTTACGAGGACTGAGTCACCTGCACCAGCACAAAGTGATTCATCGAGATAT
TAAAGGGCAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGCCGATCAGGGCGCGCAGCCCACACGCACCGCGGCTCCGGGCTTGGAGATCCGTGCAG
GTTGGGCTCCCGGACTAGTGGACCGACGCGCGGAAGATCGCGTTCAGGCGCTGTGGGGCC
GGGGTGGGCGGGGGAGGCTGGGCCCCGGGCCTCTGGCTCCACACCCGCATGAGGACGCGA
GTGAAATAGACCAAGGTGGAATTTCTAAGGGAGAAGCTTCGGGGTGGTTTTGGTCCATTT
CTCCCGCGAAGAAGTCGACATGGCGAGCGACTCCCCGGCTCGCAGCCTGGATGAAATCGA
TCTCTCGGCTTTGAGGGATCCTGCAGGGATCTTTGAATTGGTGGAACTTGTTGGCAATGG
AACATATGGACAAGTGTATAAGGGTCGTCATGTCAAAACAGGCCAGCTTGCAGCCATTAA
GGTTATGGATGTCACAGGGGATGAAGAGGAAGAAATCAAACAGGAAATTAACATGTTGAA
GAAATATTCTCATCACCGGAATATTGCTACATACTATGGTGCTTTTATCAAAAAGAACCC
ACCAGGCATGGATGACCAACTTTGGTTGGTGATGGAGTTTTGTGGCGCTGGCTCTGTCAC
TGACCTGATCAAGAACACGAAAGGTAACACATTGAAGGAGGAGTGGATCGCATATATCTG
CAGGGAGATTTTACGAGGACTGAGTCACCTGCACCAGCACAAAGTGATTCATCGAGATAT
TAAAGGGCAGAA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q61155_MOUSE

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q61155_MOUSE

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               154-272, + strand, RNAz p=0.803761

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               154-272, + strand, RNAz p=0.803761

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-317, gnl|bosTau2|chr1 (65044317-65044636)
               

               
               1-317, gnl|Hg17|chr3 (172660814-172660497)
               

               
               1-317, gnl|Mm7|chr3 (28079088-28079409)
               


               
               432-568, gnl|bosTau2|chr19 (14781915-14782051)
               

               
               432-568, gnl|Hg17|chr2 (101898901-101899036)
               

               
               432-568, gnl|Mm7|chr11 (70680546-70680682)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-317, gnl|bosTau2|chr1 (65044317-65044636)
               

               
               1-317, gnl|Hg17|chr3 (172660814-172660497)
               

               
               1-317, gnl|Mm7|chr3 (28079088-28079409)
               


               
               432-568, gnl|bosTau2|chr19 (14781915-14782051)
               

               
               432-568, gnl|Hg17|chr2 (101898901-101899036)
               

               
               432-568, gnl|Mm7|chr11 (70680546-70680682)

	1-317, gnl\|bosTau2\|chr1 (65044317-65044636)
	1-317, gnl\|Hg17\|chr3 (172660814-172660497)
	1-317, gnl\|Mm7\|chr3 (28079088-28079409)

	432-568, gnl\|bosTau2\|chr19 (14781915-14782051)
	432-568, gnl\|Hg17\|chr2 (101898901-101899036)
	432-568, gnl\|Mm7\|chr11 (70680546-70680682)