Non-Coding RNA Search

Ss1.1-LyN1-MLN01B060094.5

Sequence:


               
               AAACCGACTAGAACCCGTGAGGGT------------------------------------
------------------------------------------------------------
------------------------AAGACAAAAAGAAAAAAATAGAAAAGAAAATTAACT
TTAAAAAGGTTTCTTCTGTCTCACATCTTGAAGGAAAATTGGAAACTGTTGTGGCTCTCC
TGAGGAGGTTGAAATTTTTGTCATTATCAGCTCACATTAGAGGATGCAAGTGGTAGGCTT
TTGGTTAGATATATTTGGGTTCAGTCACATTGTGAGTAGGCAACTGGAAAGTATGTTTGG
CCTCTTTCAGTCTCGGTATCCTTATCTATTTGAGGGAAATGGAAATAATTGATTAGCCTG
TCTTTCAGGAATATTGGGAGGACCGATGAGAAAATAAATATAAAAATGCTATCTAAGCAC
CAAATAAATGGATGATTACTCTCAGGTCTTTGGAGGAAGTTGTGTCATTGATTTCCCAAG
AGAAGGAACAGACCTACTCATCTTCCTCTTTCTTAAGGCCTGGTCAAGTTTCAAGCTCAT
GAGAGGGGAAAAGGAGGGTCTGTGTAGTTTTTCTTTCATCTTTCTACCTTGAAAACCTAG
AGAATCTTTGGCCTCTGCTGGAAGAAAATTCAGCATTAAAAAACACCTCTTTCACATCTT
TTTGATTAGAGCTTTTCACTGCTGATGAATAATAATAGTCCTAAGCAAACAAGGAACTTA
TTGGTTCACTAACTGAAAGTCCAGGTCTGACAGCCTTCAGGCATGGTTGGATCCAGGTCC
TTAGAAGCTAAGATTAGGAACCTGCCTCCTTCTTTTGAGTCTGTATTCCTCTGTTGGTTT
CTGGTGGGTTTTTATCTGTTTGTCTGATTTTTTGGGGAGACTTAGGCTCTCCTTTTATGG
AGGCAAAGTGACTGATTACCAGCATCCCATGGCTCCTATTCAGCTAGTTTTAACAGATCC
AGAAGAAAAAGACACCTTCTTTTCCTGTTGTTCACCAGAATTCTTGGGCCTGGATCTTGT
TGCTACAACTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACCGACTAGAACCCGTGAGGGT------------------------------------
------------------------------------------------------------
------------------------AAGACAAAAAGAAAAAAATAGAAAAGAAAATTAACT
TTAAAAAGGTTTCTTCTGTCTCACATCTTGAAGGAAAATTGGAAACTGTTGTGGCTCTCC
TGAGGAGGTTGAAATTTTTGTCATTATCAGCTCACATTAGAGGATGCAAGTGGTAGGCTT
TTGGTTAGATATATTTGGGTTCAGTCACATTGTGAGTAGGCAACTGGAAAGTATGTTTGG
CCTCTTTCAGTCTCGGTATCCTTATCTATTTGAGGGAAATGGAAATAATTGATTAGCCTG
TCTTTCAGGAATATTGGGAGGACCGATGAGAAAATAAATATAAAAATGCTATCTAAGCAC
CAAATAAATGGATGATTACTCTCAGGTCTTTGGAGGAAGTTGTGTCATTGATTTCCCAAG
AGAAGGAACAGACCTACTCATCTTCCTCTTTCTTAAGGCCTGGTCAAGTTTCAAGCTCAT
GAGAGGGGAAAAGGAGGGTCTGTGTAGTTTTTCTTTCATCTTTCTACCTTGAAAACCTAG
AGAATCTTTGGCCTCTGCTGGAAGAAAATTCAGCATTAAAAAACACCTCTTTCACATCTT
TTTGATTAGAGCTTTTCACTGCTGATGAATAATAATAGTCCTAAGCAAACAAGGAACTTA
TTGGTTCACTAACTGAAAGTCCAGGTCTGACAGCCTTCAGGCATGGTTGGATCCAGGTCC
TTAGAAGCTAAGATTAGGAACCTGCCTCCTTCTTTTGAGTCTGTATTCCTCTGTTGGTTT
CTGGTGGGTTTTTATCTGTTTGTCTGATTTTTTGGGGAGACTTAGGCTCTCCTTTTATGG
AGGCAAAGTGACTGATTACCAGCATCCCATGGCTCCTATTCAGCTAGTTTTAACAGATCC
AGAAGAAAAAGACACCTTCTTTTCCTGTTGTTCACCAGAATTCTTGGGCCTGGATCTTGT
TGCTACAACTTG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               63-957, gnl|bosTau2|chr9 (47930743-47929876)
               

               
               63-957, gnl|Hg17|chr6 (144103571-144105322)
               

               
               63-957, gnl|Mm7|chr10 (12974659-12973833)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               63-957, gnl|bosTau2|chr9 (47930743-47929876)
               

               
               63-957, gnl|Hg17|chr6 (144103571-144105322)
               

               
               63-957, gnl|Mm7|chr10 (12974659-12973833)

	63-957, gnl\|bosTau2\|chr9 (47930743-47929876)
	63-957, gnl\|Hg17\|chr6 (144103571-144105322)
	63-957, gnl\|Mm7\|chr10 (12974659-12973833)