Non-Coding RNA Search

Ss1.1-LyN1-MLN01B070081.5

Sequence:


               
               ATAAGACAGACAAGTTGCATTTAATCACCAATACTCCTTATTCCAGATGATGTACTTTTT
TTTATTATTATAGTTGATTTACAGTGTTCTGTCAATTTCTGCTTACAGCATAGTGACCCA
CTTATACATGTATCTACATTCTTTTTCTCACATTATCCTTCACAGATGATGCACTTTTGA
TAATTTTCTTGTTTTATTCTGTTGTTTCTTTCTCTCTTTCTTTCTTTTTAATGCTGGTCA
TGATTAGCTTCATGACCCAGCAGAGCATCCTGACTTGCAGTTTGAAAAACACTAAGTTGG
CGGGGTATCAGTACTTTCAAGGTTCTGTTAGCATCAGAAACTGATTGTCCGATATGAGGC
AAAAGGCATTTGTGGGAAGAAGGCTGGGGACCCAAAGAAGTGCCAGAAAAGCTGGAAAAC
TGGGTTTGGAAATGGGTGGGAACCAACAAAGGGCCCAAGGGCTGGACAGAAGCAGGACAG
CTGACCAGTCGCCTCTGCCTGGCCTGCGTGGTGGTGCACGTCAGGCAGGCTGGGTCCTGG
ATTTGCACCAAGGGAGAGGTAACCTTGGAAGGAAATGACAGTGCTGTTGGAAAGGGAACC
GTGTGTTCAGTAGCCAAAGAAGAATAGTCTACACGAGGTAACACAAGTCAGGCGCATAAA
AAGGTATCTCAGAGTGAATGGTTTCCCTCCTTGAGAGTGGATCCAAATGCGCATGTTCTT
GCCTGCTGGTGACCTTGCCACATGGTCACCCTTTCTCCCTTCAGAAAGCAGTTTGGGTAA
AGTTATCAAAATCTAATGCCCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATAAGACAGACAAGTTGCATTTAATCACCAATACTCCTTATTCCAGATGATGTACTTTTT
TTTATTATTATAGTTGATTTACAGTGTTCTGTCAATTTCTGCTTACAGCATAGTGACCCA
CTTATACATGTATCTACATTCTTTTTCTCACATTATCCTTCACAGATGATGCACTTTTGA
TAATTTTCTTGTTTTATTCTGTTGTTTCTTTCTCTCTTTCTTTCTTTTTAATGCTGGTCA
TGATTAGCTTCATGACCCAGCAGAGCATCCTGACTTGCAGTTTGAAAAACACTAAGTTGG
CGGGGTATCAGTACTTTCAAGGTTCTGTTAGCATCAGAAACTGATTGTCCGATATGAGGC
AAAAGGCATTTGTGGGAAGAAGGCTGGGGACCCAAAGAAGTGCCAGAAAAGCTGGAAAAC
TGGGTTTGGAAATGGGTGGGAACCAACAAAGGGCCCAAGGGCTGGACAGAAGCAGGACAG
CTGACCAGTCGCCTCTGCCTGGCCTGCGTGGTGGTGCACGTCAGGCAGGCTGGGTCCTGG
ATTTGCACCAAGGGAGAGGTAACCTTGGAAGGAAATGACAGTGCTGTTGGAAAGGGAACC
GTGTGTTCAGTAGCCAAAGAAGAATAGTCTACACGAGGTAACACAAGTCAGGCGCATAAA
AAGGTATCTCAGAGTGAATGGTTTCCCTCCTTGAGAGTGGATCCAAATGCGCATGTTCTT
GCCTGCTGGTGACCTTGCCACATGGTCACCCTTTCTCCCTTCAGAAAGCAGTTTGGGTAA
AGTTATCAAAATCTAATGCCCCCA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               409-505, + strand, RNAz p=0.539736

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               409-505, + strand, RNAz p=0.539736

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               181-677, gnl|bosTau2|chr23 (13446064-13446552)
               

               
               181-677, gnl|Hg17|chr6 (42108844-42108318)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               181-677, gnl|bosTau2|chr23 (13446064-13446552)
               

               
               181-677, gnl|Hg17|chr6 (42108844-42108318)

	181-677, gnl\|bosTau2\|chr23 (13446064-13446552)
	181-677, gnl\|Hg17\|chr6 (42108844-42108318)