Non-Coding RNA Search

Ss1.1-LyN1-MLN01D020090.5

Sequence:


               
               CATTGTTTTGACTGAAAATGCCGTCGGTTTCGAAAGCGGCGGCGGCGGCGCTGAGCGGGT
CCCCCCCGCAGACCGAGAAGCCGACCCACTACAGGTATCTAAAGGAGTTTAGGACAGAGC
AGTGCTCCCTGTTTGTGCAGCACAAGTGCGCCCAGCACAGGCCATTTACCTGTTTCCATT
GGCATTTCCTAAATCAGCGTCGGCGCAGACCGCTCCGCAGGCGCGACGGCACCTTCAACT
ACAGCCCGGACGTGTACTGCTCCAAGTACGACGAGGCCAGCGGCGTGTGCCCTGACGGCG
ACGCGTGAGTGTGCGCGCGCGTAAGCTTGGAGGGCAGCGCCGGCTGCCCACACCTGGGCG
GGCGGCAGGCTTGGGCTTTTCAGCACCTGGCACCTGCAGGGCCCTGTCGTCCCTGTGAGT
TTTTCCGAGAACCACTGGTCTTGGGGGGCGCGGGGGGTGGGGGGACACATATCCCTGGTT
CTCGGCCACTGCAGGAAGGACTGCCAGCGGATGCTGGATCAACCTGGCACGGTGCGAAAC
GATTCTGCCCCACCTTCTCTGCTTTTCTTGCATTAGAACCAACCCTTAGGAGATACACCT
TCTGGGTTTAGGACCATTTTGTAGGCATCACCTGTTTTTTGGAGAGCGCCTGTGGGAATG
TTTGCTCACATTATGCAAATACTTCTGGAAAGTTTCTTTTCTTACTGTTGATATGTTTAA
TTTTTAAGAAAAAAAGCGATAGGAAAGTTATTTACAGGCTATCATTTGTATCACCCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTGTTTTGACTGAAAATGCCGTCGGTTTCGAAAGCGGCGGCGGCGGCGCTGAGCGGGT
CCCCCCCGCAGACCGAGAAGCCGACCCACTACAGGTATCTAAAGGAGTTTAGGACAGAGC
AGTGCTCCCTGTTTGTGCAGCACAAGTGCGCCCAGCACAGGCCATTTACCTGTTTCCATT
GGCATTTCCTAAATCAGCGTCGGCGCAGACCGCTCCGCAGGCGCGACGGCACCTTCAACT
ACAGCCCGGACGTGTACTGCTCCAAGTACGACGAGGCCAGCGGCGTGTGCCCTGACGGCG
ACGCGTGAGTGTGCGCGCGCGTAAGCTTGGAGGGCAGCGCCGGCTGCCCACACCTGGGCG
GGCGGCAGGCTTGGGCTTTTCAGCACCTGGCACCTGCAGGGCCCTGTCGTCCCTGTGAGT
TTTTCCGAGAACCACTGGTCTTGGGGGGCGCGGGGGGTGGGGGGACACATATCCCTGGTT
CTCGGCCACTGCAGGAAGGACTGCCAGCGGATGCTGGATCAACCTGGCACGGTGCGAAAC
GATTCTGCCCCACCTTCTCTGCTTTTCTTGCATTAGAACCAACCCTTAGGAGATACACCT
TCTGGGTTTAGGACCATTTTGTAGGCATCACCTGTTTTTTGGAGAGCGCCTGTGGGAATG
TTTGCTCACATTATGCAAATACTTCTGGAAAGTTTCTTTTCTTACTGTTGATATGTTTAA
TTTTTAAGAAAAAAAGCGATAGGAAAGTTATTTACAGGCTATCATTTGTATCACCCTTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               85-203, - strand, RNAz p=0.621209

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               85-203, - strand, RNAz p=0.621209

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               85-311, gnl|bosTau2|chr19 (49724609-49724383)
               

               
               85-311, gnl|Hg17|chr17 (71317426-71317652)
               

               
               85-311, gnl|Mm7|chr11 (116156712-116156938)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               85-311, gnl|bosTau2|chr19 (49724609-49724383)
               

               
               85-311, gnl|Hg17|chr17 (71317426-71317652)
               

               
               85-311, gnl|Mm7|chr11 (116156712-116156938)

	85-311, gnl\|bosTau2\|chr19 (49724609-49724383)
	85-311, gnl\|Hg17\|chr17 (71317426-71317652)
	85-311, gnl\|Mm7\|chr11 (116156712-116156938)