Non-Coding RNA Search

Ss1.1-LyN1-MLN01D030025.5

Sequence:


               
               CATTTCTCTTCC------------------------------------------------
------------------------------------------------------------
------------------------------------TTTTTCCCCCCTTCACTTTAACAA
CATCATTTTATATCCTCTTGACCCACATAATTTCCGGTAAGAAATCTGCAGTTATTCAAG
TCATTGTTTCCCTGTGTGAGATGTATTGTTTTTCTCTGGCTGCTTTCAAGGTTTTGTTTT
GTTTCCTTTAGTTTTTAGCCATTTGATTATGATGGATCTGGGCATAAATTTCTTTGAGTT
TAACTTAATTGGAATTTACTGAGTTTCTTGAATCTGTAAGATTATATCTTTCACAACATT
TGGGAGCGCTTCCAACTTTATTTCTTTAAATGCTTCTGCTCCACATCCTTTCTCTCTCCC
TCTGGGACTCTGCTGACACCAGTGCTAAATCTTTTGATGTTTTTTGATACTGTCCCATGG
GTGCCTAAGATCTTGTACATTTTTAAAAATATTTTTTCCTCTTTGTTTAAATTACGTAAT
TTCTCTTTTTTTGTCTTTTAAGGTTTTCTTGTAGTATAGTTGATTTACAATGTTGTGATC
ACTACTGCTGTACAATAGGGTGATTCAGTTATACATACACACACATCCATTCTTTTTCAA
ATATAATTTCTCTTGACCTGTCTTCAAGCTCACTGACACATATACTCTTTCAAAAATTAT
ATGAAGCCCGCCAGTGGAGGAGTAATGGGAATTTGCCCCCGATTCAGAACCCCAGCTCCT
CTCATTAGCAAGAAGTGTTCCCCTTCCTCAGAGTTACAGGAACCAGCTGCCACTGTGGAA
CTGTGCTGCTGCCTCTGCTATGGGCACAGTATTGCCTGGTGCCCAGGGAAGGAGAGAAGG
GAAAAAAATCCAGGGGCTTTCCCCTGCTTCTCCAACCCTTGGAGTTCCTTTGCCTGCTCC
TTGGGCTAGGGAGAAAAGTGAGGGGCTTTTCCTGGAGCTCCATTGGTCCTCAATTTTCAG
ATGCCTGTTAATTTTCTGATTTTTTTCTTTTAAAAGATAGTTGTTAATATTGGTATTTGC
TGCACACAGAATAAGAGAACGTGTGTTTCTTGTCCTCATGCTTGAAGAACCATGGGAGTT
GGAGGAAGGGTGGCTGTGGTTGAGTGGGCACCACAGTGGTATATATTCTGGGCTTTAGGC
TTCCTTTGAATTTAGGCCAGGTAATCCTGGAAGGGGAAAAGTGGTAAACTCACCACCGAT
TTGCTGGAACTTAGAATTCTGGTTTCTTCCCTCAGTCTGCTTTCTACCATTTACTTTTCG
GAGTCTTCAGATAGCTGTCCCATGTTTTCTGTTCAGAAATTACAGTCAGGAGTTCCCGTC
GTGGCGCAGTGGTTAACGAATCCGACTAGGAACCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATTTCTCTTCC------------------------------------------------
------------------------------------------------------------
------------------------------------TTTTTCCCCCCTTCACTTTAACAA
CATCATTTTATATCCTCTTGACCCACATAATTTCCGGTAAGAAATCTGCAGTTATTCAAG
TCATTGTTTCCCTGTGTGAGATGTATTGTTTTTCTCTGGCTGCTTTCAAGGTTTTGTTTT
GTTTCCTTTAGTTTTTAGCCATTTGATTATGATGGATCTGGGCATAAATTTCTTTGAGTT
TAACTTAATTGGAATTTACTGAGTTTCTTGAATCTGTAAGATTATATCTTTCACAACATT
TGGGAGCGCTTCCAACTTTATTTCTTTAAATGCTTCTGCTCCACATCCTTTCTCTCTCCC
TCTGGGACTCTGCTGACACCAGTGCTAAATCTTTTGATGTTTTTTGATACTGTCCCATGG
GTGCCTAAGATCTTGTACATTTTTAAAAATATTTTTTCCTCTTTGTTTAAATTACGTAAT
TTCTCTTTTTTTGTCTTTTAAGGTTTTCTTGTAGTATAGTTGATTTACAATGTTGTGATC
ACTACTGCTGTACAATAGGGTGATTCAGTTATACATACACACACATCCATTCTTTTTCAA
ATATAATTTCTCTTGACCTGTCTTCAAGCTCACTGACACATATACTCTTTCAAAAATTAT
ATGAAGCCCGCCAGTGGAGGAGTAATGGGAATTTGCCCCCGATTCAGAACCCCAGCTCCT
CTCATTAGCAAGAAGTGTTCCCCTTCCTCAGAGTTACAGGAACCAGCTGCCACTGTGGAA
CTGTGCTGCTGCCTCTGCTATGGGCACAGTATTGCCTGGTGCCCAGGGAAGGAGAGAAGG
GAAAAAAATCCAGGGGCTTTCCCCTGCTTCTCCAACCCTTGGAGTTCCTTTGCCTGCTCC
TTGGGCTAGGGAGAAAAGTGAGGGGCTTTTCCTGGAGCTCCATTGGTCCTCAATTTTCAG
ATGCCTGTTAATTTTCTGATTTTTTTCTTTTAAAAGATAGTTGTTAATATTGGTATTTGC
TGCACACAGAATAAGAGAACGTGTGTTTCTTGTCCTCATGCTTGAAGAACCATGGGAGTT
GGAGGAAGGGTGGCTGTGGTTGAGTGGGCACCACAGTGGTATATATTCTGGGCTTTAGGC
TTCCTTTGAATTTAGGCCAGGTAATCCTGGAAGGGGAAAAGTGGTAAACTCACCACCGAT
TTGCTGGAACTTAGAATTCTGGTTTCTTCCCTCAGTCTGCTTTCTACCATTTACTTTTCG
GAGTCTTCAGATAGCTGTCCCATGTTTTCTGTTCAGAAATTACAGTCAGGAGTTCCCGTC
GTGGCGCAGTGGTTAACGAATCCGACTAGGAACCAT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               13-463, gnl|bosTau2|chr10 (47063595-47063165)
               


               
               577-931, gnl|bosTau2|chr10 (47063178-47062820)
               

               
               577-931, gnl|hg17|chr14 (56168777-56169104)
               

               
               577-931, gnl|panTro1|chr15 (55622039-55622366)
               

               
               577-931, gnl|rheMac2|chr7 (119661344-119661654)
               


               
               1093-1274, gnl|bosTau2|chr10 (47062820-47062640)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-463, gnl|bosTau2|chr10 (47063595-47063165)
               


               
               577-931, gnl|bosTau2|chr10 (47063178-47062820)
               

               
               577-931, gnl|hg17|chr14 (56168777-56169104)
               

               
               577-931, gnl|panTro1|chr15 (55622039-55622366)
               

               
               577-931, gnl|rheMac2|chr7 (119661344-119661654)
               


               
               1093-1274, gnl|bosTau2|chr10 (47062820-47062640)

	13-463, gnl\|bosTau2\|chr10 (47063595-47063165)

	577-931, gnl\|bosTau2\|chr10 (47063178-47062820)
	577-931, gnl\|hg17\|chr14 (56168777-56169104)
	577-931, gnl\|panTro1\|chr15 (55622039-55622366)
	577-931, gnl\|rheMac2\|chr7 (119661344-119661654)

	1093-1274, gnl\|bosTau2\|chr10 (47062820-47062640)