Ss1.1-LyN1-MLN01E090009.5
|
ATGTTTTAGGAATTTGCTCATTCCACATAGCTGAAGACTTGCTCTGTGCCAGGCATAGTG
CTAGGCGCTATAGACACAGGATGAATAAAATGCAGTCAGCACCGAGAGGGAACTCCCAGC
CTAATGGAAGATGCAGATGGCATGTAGAGCAACTGCACATATACAGTGTGGTAAGTGTGT
GGACAGGGTGCAGCCAAGAGAGGGATGGAAGCAGCAGGGGATGGGCCCAGAGTCAATCAC
AGCAGTGGAGAAGGCTTTTGGAGGATCCAGCTTGAGCTGCGTCTTAGAGGATGCGTGAGT
GTAAGGCCGGCAGAGAGAGGTGGCATGCAGAGTCACAGAACATGTTTCTTTGTGGACATC
TATGAGGCTGTCTCTGAGACATATACGCAGGAGAATTTGCTGGGCCACGAGGCATAAATA
ACTTAATTTCACTCAATATTTATATGATTCTCCTAAACAACAAAATTCCTACAGCTGTGT
ATCCATTTCCCCCACATCTGCACAAGAGTTAATGTTTTCCAACTTTCTAAATGTTTGCCA
ATGAGGTGGGGGAGAAAGTGGTACCTCACCCCAATGTGCATTTCTATGTTTTCTTAACAG
TTTGTGTGCTTCTTCAGAAATTTATTAGCCATTTTGGTTTCTCCTGTGAATTCCCTATTC
ACAACTTTTGCTCATTTTCTATTTATTTTCCTTTATTTTTCTTGCTGATTTACAAGAATT
ACTTGAATAATCTACTTCTTAATCATTTGCTGGCTTTAGATTTTGCCAAAGTCTTCCTGC
CAAATTGTCATGCATCTGTTAAGGTTTATAATGGTGCACTTTGATGAACACAATCCTGAT
ATAAATCCATTTGTTTCTCCCTTTATGGTTCGGGCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATGTTTTAGGAATTTGCTCATTCCACATAGCTGAAGACTTGCTCTGTGCCAGGCATAGTG
CTAGGCGCTATAGACACAGGATGAATAAAATGCAGTCAGCACCGAGAGGGAACTCCCAGC
CTAATGGAAGATGCAGATGGCATGTAGAGCAACTGCACATATACAGTGTGGTAAGTGTGT
GGACAGGGTGCAGCCAAGAGAGGGATGGAAGCAGCAGGGGATGGGCCCAGAGTCAATCAC
AGCAGTGGAGAAGGCTTTTGGAGGATCCAGCTTGAGCTGCGTCTTAGAGGATGCGTGAGT
GTAAGGCCGGCAGAGAGAGGTGGCATGCAGAGTCACAGAACATGTTTCTTTGTGGACATC
TATGAGGCTGTCTCTGAGACATATACGCAGGAGAATTTGCTGGGCCACGAGGCATAAATA
ACTTAATTTCACTCAATATTTATATGATTCTCCTAAACAACAAAATTCCTACAGCTGTGT
ATCCATTTCCCCCACATCTGCACAAGAGTTAATGTTTTCCAACTTTCTAAATGTTTGCCA
ATGAGGTGGGGGAGAAAGTGGTACCTCACCCCAATGTGCATTTCTATGTTTTCTTAACAG
TTTGTGTGCTTCTTCAGAAATTTATTAGCCATTTTGGTTTCTCCTGTGAATTCCCTATTC
ACAACTTTTGCTCATTTTCTATTTATTTTCCTTTATTTTTCTTGCTGATTTACAAGAATT
ACTTGAATAATCTACTTCTTAATCATTTGCTGGCTTTAGATTTTGCCAAAGTCTTCCTGC
CAAATTGTCATGCATCTGTTAAGGTTTATAATGGTGCACTTTGATGAACACAATCCTGAT
ATAAATCCATTTGTTTCTCCCTTTATGGTTCGGGCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
605-723, CJ010553 full-length enriched swine cDNA library, adult mesenteric
(dbj|CJ010553.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
|
605-723, CJ010553 full-length enriched swine cDNA library, adult mesenteric
(dbj|CJ010553.1|), blast E-value=0, identity=100% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
