Non-Coding RNA Search

Ss1.1-LyN1-MLN01G100076.5

Sequence:


               
               CTTATAAAGCCTAAATTAACAGCTGGTTTGGTTTGAGTTCTCCGGGATCTGACTAAGGGA
TTAGAGTCCATTCTCAAGTGAGTCAATCTAGTTTAATTTATTTCAGGTCTATCAAAAAAG
ATCAATCAAAGCTCTTTTGAAAGTAAAGCTATAATCGGCCTGCACACTTAGAAGTCACTA
TTGCACTTGTGTTTCTCTCTGGAGGAAAAGTGCTCAGGCTGTGGCTCGGAGGATGCATTA
GGGCATTTTCCTTGTCTCTCCCTTTCTTGCGGCCCTGGGAAGATTCTGAGAAGGCGTCAT
GTTCAAGAATCCTGCTCAGGTGGGTGCTGCCCTGACCTCCTGCACCCTTTTCTTTGGTAA
TGTTGGATCCATGGTTTGAAATTTCTAGTTCAGCATGATGGAATACCTGACCCTTGACTC
CAAAGTCAGACAGACCCACCTTTGACTTTGTGGTTCTGGATGCCCTTGAGCAGGTGCTTC
CCCTAAACCTCAGTTTCCCTGTCTGTAAAATAGGCATAACAAAAATCTCCCTCAGAGGAT
CGTTGTTATAACAACATGAAATAACACTATATCTTTTGATTTTTGTTGTTGTTGTTGTTG
TTGTTAAAAAAACCAAAAAACAAAAAACCAACACTGTAGGGGTGTACCAAGAAGCTGAAG
GCCCTTCCCCCCACCCCCCAGACATTCAGCAGAAACAGATTGATTTAGGGTTGGCACTGT
GTCTTTGCTCTGGGAATGCCTTGCCCTTGCCCTGTAGGAGTGTACAGTCCATTGGGAAAA
GAAAGTACTTAGCAGAGCAGGGTATCTGGATGCTGCTCACCTTGGTCCAGAGAATGCGTC
TGGTCTTCCATTTGACCGAACGAAAACAGTGTGGGCCACCATCTGTCTTCCACTACTGGT
TCCTGTCCCTCGCGTCTTTCTATTTCTCTTAACTTCCTCCTGGCCCCCCAGGTTTGAACA
TTTGCGTTATCACTGGTACCTATGTGAGTCTAGCCTCATTTTTTTCTAGCTATGAAATGG
GGCGGGGATTAGTCCTCCCAGTATGTGTCAAGGGAGGGGAACATTTTGGAGGTATTCTTG
TGGTTCTGTTGTGTGTGGGAACTGAGGCTTTGTGTACTCAGCAGTCATCACTCCAGAAAG
AATCTTAATAGTAGTAGCAAAAGGAAAAAAGAATAGATGCTGCTTGTGGAACTTTTGCTA
TGTGCCAGTTTCTAGAACATTCTGTATTTTGAAGCTGAATGCTCACAGCAATTTTGTACA
TCATCTTCATGTCACAGATGAGAAAACTGAAGAAAGTTAGGAGACCGTCCCCAAAATACA
GCTAGTAAGTGGCTGCACTGGGGTTTGAGTCGGGGCCTTGGCTAATGCTAGGCCTGCCAC
ATCGTATGGGTGCTACTTTGCCATGGAAACGGGAGGCTGCTGTCGGGAATATCATATTAT
TGGGCTCCTCTTTGGAAACTAACGTGGACCTTGGAGGCGAGTTTGAATCCTTTTGCAAGT
GAATAATTGGATGGGGTTACCTGTGTCTCCTAAAACGAAAGCCTCCTTTTCCTGGGAGAG
GGCTGAAATTTCTTCGTCTGACGCGCATGCGTGGCCAAGGCCTTGCTTGTGGACTGTAGG
TATCTTACCAGGCTCATGCACCTGATTCTGGTGAGGATTCTGCAACTTTTGTGGGTCTCC
TGTGCAACGCCTCTTTCCTATCTCTGCATCTGGGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTATAAAGCCTAAATTAACAGCTGGTTTGGTTTGAGTTCTCCGGGATCTGACTAAGGGA
TTAGAGTCCATTCTCAAGTGAGTCAATCTAGTTTAATTTATTTCAGGTCTATCAAAAAAG
ATCAATCAAAGCTCTTTTGAAAGTAAAGCTATAATCGGCCTGCACACTTAGAAGTCACTA
TTGCACTTGTGTTTCTCTCTGGAGGAAAAGTGCTCAGGCTGTGGCTCGGAGGATGCATTA
GGGCATTTTCCTTGTCTCTCCCTTTCTTGCGGCCCTGGGAAGATTCTGAGAAGGCGTCAT
GTTCAAGAATCCTGCTCAGGTGGGTGCTGCCCTGACCTCCTGCACCCTTTTCTTTGGTAA
TGTTGGATCCATGGTTTGAAATTTCTAGTTCAGCATGATGGAATACCTGACCCTTGACTC
CAAAGTCAGACAGACCCACCTTTGACTTTGTGGTTCTGGATGCCCTTGAGCAGGTGCTTC
CCCTAAACCTCAGTTTCCCTGTCTGTAAAATAGGCATAACAAAAATCTCCCTCAGAGGAT
CGTTGTTATAACAACATGAAATAACACTATATCTTTTGATTTTTGTTGTTGTTGTTGTTG
TTGTTAAAAAAACCAAAAAACAAAAAACCAACACTGTAGGGGTGTACCAAGAAGCTGAAG
GCCCTTCCCCCCACCCCCCAGACATTCAGCAGAAACAGATTGATTTAGGGTTGGCACTGT
GTCTTTGCTCTGGGAATGCCTTGCCCTTGCCCTGTAGGAGTGTACAGTCCATTGGGAAAA
GAAAGTACTTAGCAGAGCAGGGTATCTGGATGCTGCTCACCTTGGTCCAGAGAATGCGTC
TGGTCTTCCATTTGACCGAACGAAAACAGTGTGGGCCACCATCTGTCTTCCACTACTGGT
TCCTGTCCCTCGCGTCTTTCTATTTCTCTTAACTTCCTCCTGGCCCCCCAGGTTTGAACA
TTTGCGTTATCACTGGTACCTATGTGAGTCTAGCCTCATTTTTTTCTAGCTATGAAATGG
GGCGGGGATTAGTCCTCCCAGTATGTGTCAAGGGAGGGGAACATTTTGGAGGTATTCTTG
TGGTTCTGTTGTGTGTGGGAACTGAGGCTTTGTGTACTCAGCAGTCATCACTCCAGAAAG
AATCTTAATAGTAGTAGCAAAAGGAAAAAAGAATAGATGCTGCTTGTGGAACTTTTGCTA
TGTGCCAGTTTCTAGAACATTCTGTATTTTGAAGCTGAATGCTCACAGCAATTTTGTACA
TCATCTTCATGTCACAGATGAGAAAACTGAAGAAAGTTAGGAGACCGTCCCCAAAATACA
GCTAGTAAGTGGCTGCACTGGGGTTTGAGTCGGGGCCTTGGCTAATGCTAGGCCTGCCAC
ATCGTATGGGTGCTACTTTGCCATGGAAACGGGAGGCTGCTGTCGGGAATATCATATTAT
TGGGCTCCTCTTTGGAAACTAACGTGGACCTTGGAGGCGAGTTTGAATCCTTTTGCAAGT
GAATAATTGGATGGGGTTACCTGTGTCTCCTAAAACGAAAGCCTCCTTTTCCTGGGAGAG
GGCTGAAATTTCTTCGTCTGACGCGCATGCGTGGCCAAGGCCTTGCTTGTGGACTGTAGG
TATCTTACCAGGCTCATGCACCTGATTCTGGTGAGGATTCTGCAACTTTTGTGGGTCTCC
TGTGCAACGCCTCTTTCCTATCTCTGCATCTGGGGT

Aligned organism(s): 5 entry(ies)

More info

Aligned organism(s): 5 entry(ies)

Help | Less info


               
               1-382, gnl|bosTau2|chr26 (22314226-22314621)
               

               
               1-382, gnl|Hg17|chr10 (114736197-114736593)
               

               
               1-382, gnl|Mm7|chr19 (55689675-55690044)
               


               
               837-1716, gnl|bosTau2|chr26 (22315779-22316671)
               

               
               837-1716, gnl|Hg17|chr10 (114738208-114739102)

Aligned organism(s): 5 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-382, gnl|bosTau2|chr26 (22314226-22314621)
               

               
               1-382, gnl|Hg17|chr10 (114736197-114736593)
               

               
               1-382, gnl|Mm7|chr19 (55689675-55690044)
               


               
               837-1716, gnl|bosTau2|chr26 (22315779-22316671)
               

               
               837-1716, gnl|Hg17|chr10 (114738208-114739102)

	1-382, gnl\|bosTau2\|chr26 (22314226-22314621)
	1-382, gnl\|Hg17\|chr10 (114736197-114736593)
	1-382, gnl\|Mm7\|chr19 (55689675-55690044)

	837-1716, gnl\|bosTau2\|chr26 (22315779-22316671)
	837-1716, gnl\|Hg17\|chr10 (114738208-114739102)