Ss1.1-LyN1-MLN01H030083.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTCTCCAGGGAGGCCGGGCCCGGGGAGAAAGTTGGAGCGGCGACCTAAGGAGGCAGTGGC GTGATCCGGAACCAAATCGACCCGCGGTGCGGTGCGGAGACCCCATGAAGCCCTGGACAT GAACAAGCTGAGTGGAGGCGGCGGGCGCAGGACTCGGGTGGAAGGGGGCCAGCTGGGGGG CGAGGAGTGGACCCGCCACGGGAGCTTCGTCAATAAGCCCACGCGGGGCTGGCTGCATCC CAACGACAAAGTCATGGGACCCGGGGTTTCCTACTTGGTTCGGTACATGGGCTGTGTGGA GGTCCTGCAGTCGATGCGCGCCCTGGACTTCAACACCCGGACTCAGGTCACCAGGGAGGC CATCAGTCTGGTGTGTGAGGCTGTGCCGGGTGCGAAGGGGGCGACAAGGAGGAGAAAGCC CTGTGGCCGCCCACTCAGCTCCATCCTGGGGAGGAGTAACCTGAAATTTGCTGGAATGCC AATCACTCTCACCGTCTCCACCAGCAGCCTCAACCTCATGGCCGCAGACTGCAAACAGAT CATCGCCAACCACCATATGCAATCCATCTCGTTTGCGTCCGGCGGGGACCCGGACACAGC CGAATATGTCGCCTATGTTGCCAAAGACCCGGTGAATCAGAGAGCCTGCCACATCCTGGA GTGTCCCGAAGGGCTTGCTCAGGACGTCATCAGCACCATTGGCCAGGCCTTTGAGTTGCG CTTCAAACAATACCTCAGGAACCCGCCCAAGCTGGTCACCCCTCATGACAGGATGGCTGG CTTCGATGGCTCAGCTTGGGATGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTCTCCAGGGAGGCCGGGCCCGGGGAGAAAGTTGGAGCGGCGACCTAAGGAGGCAGTGGC GTGATCCGGAACCAAATCGACCCGCGGTGCGGTGCGGAGACCCCATGAAGCCCTGGACAT GAACAAGCTGAGTGGAGGCGGCGGGCGCAGGACTCGGGTGGAAGGGGGCCAGCTGGGGGG CGAGGAGTGGACCCGCCACGGGAGCTTCGTCAATAAGCCCACGCGGGGCTGGCTGCATCC CAACGACAAAGTCATGGGACCCGGGGTTTCCTACTTGGTTCGGTACATGGGCTGTGTGGA GGTCCTGCAGTCGATGCGCGCCCTGGACTTCAACACCCGGACTCAGGTCACCAGGGAGGC CATCAGTCTGGTGTGTGAGGCTGTGCCGGGTGCGAAGGGGGCGACAAGGAGGAGAAAGCC CTGTGGCCGCCCACTCAGCTCCATCCTGGGGAGGAGTAACCTGAAATTTGCTGGAATGCC AATCACTCTCACCGTCTCCACCAGCAGCCTCAACCTCATGGCCGCAGACTGCAAACAGAT CATCGCCAACCACCATATGCAATCCATCTCGTTTGCGTCCGGCGGGGACCCGGACACAGC CGAATATGTCGCCTATGTTGCCAAAGACCCGGTGAATCAGAGAGCCTGCCACATCCTGGA GTGTCCCGAAGGGCTTGCTCAGGACGTCATCAGCACCATTGGCCAGGCCTTTGAGTTGCG CTTCAAACAATACCTCAGGAACCCGCCCAAGCTGGTCACCCCTCATGACAGGATGGCTGG CTTCGATGGCTCAGCTTGGGATGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 73 entry(ies) | More info |
| Aligned organism(s): 73 entry(ies) | Help | Less info |
| 112-283, gnl|bosTau2|chr3 (9056318-9056147) | |
| 112-283, gnl|Hg17|chr1 (151755752-151755581) | |
| 112-283, gnl|Mm7|chr3 (89548839-89549010) | |
| 417-538, gnl|bosTau2|chr3 (9054776-9054655) | |
| 417-538, gnl|canFam2|chr7 (45480142-45479993) | |
| 417-538, gnl|canFam2|chr7 (45480018-45480134) | |
| 417-538, gnl|danRer3|chr16 (26282596-26282726) | |
| 417-538, gnl|danRer3|chr16 (26282700-26282604) | |
| 417-538, gnl|dasNov1|scaffold_12589 (1464-1613) | |
| 417-538, gnl|dasNov1|scaffold_12589 (1588-1472) | |
| 417-538, gnl|echTel1|scaffold_275343 (2956-2809) | |
| 417-538, gnl|echTel1|scaffold_275343 (2832-2948) | |
| 417-538, gnl|fr1|chrUn (105168174-105168318) | |
| 417-538, gnl|fr1|chrUn (105168298-105168182) | |
| 417-538, gnl|galGal2|chr28 (1509210-1509336) | |
| 417-538, gnl|galGal2|chr28 (1509301-1509211) | |
| 417-538, gnl|hg17|chr1 (151754040-151754189) | |
| 417-538, gnl|Hg17|chr1 (151754165-151754044) | |
| 417-538, gnl|hg17|chrX (63435932-63436048) | |
| 417-538, gnl|loxAfr1|scaffold_45679 (33473-33384) | |
| 417-538, gnl|loxAfr1|scaffold_45679 (33393-33485) | |
| 417-538, gnl|mm7|chr3 (89550487-89550338) | |
| 417-538, gnl|mm7|chr3 (89550363-89550479) | |
| 417-538, gnl|Mm7|chr3 (89550360-89550481) | |
| 417-538, gnl|monDom2|scaffold_59 (2820997-2820846) | |
| 417-538, gnl|monDom2|scaffold_59 (2820873-2820989) | |
| 417-538, gnl|oryCun1|scaffold_196054 (8783-8635) | |
| 417-538, gnl|oryCun1|scaffold_196054 (8659-8775) | |
| 417-538, gnl|panTro1|chr1 (133742051-133742200) | |
| 417-538, gnl|panTro1|chrX (65215764-65215880) | |
| 417-538, gnl|rheMac2|chr1 (133512151-133512300) | |
| 417-538, gnl|rheMac2|chrX (63251162-63251278) | |
| 417-538, gnl|rn3|chr2 (181571678-181571530) | |
| 417-538, gnl|rn3|chr2 (181571554-181571670) | |
| 417-538, gnl|tetNig1|chr8 (7776270-7776403) | |
| 417-538, gnl|tetNig1|chr8 (7776374-7776278) | |
| 417-538, gnl|xenTro1|scaffold_1128 (105521-105645) | |
| 417-538, gnl|xenTro1|scaffold_1128 (105625-105510) | |
| 643-781, gnl|bosTau2|chr3 (9053934-9053796) | |
| 643-781, gnl|canFam2|chr7 (45480945-45480822) | |
| 643-781, gnl|canFam2|chr7 (45480820-45480945) | |
| 643-781, gnl|danRer3|chr16 (26271167-26271288) | |
| 643-781, gnl|danRer3|chr16 (26271289-26271164) | |
| 643-781, gnl|dasNov1|scaffold_12589 (586-709) | |
| 643-781, gnl|dasNov1|scaffold_12589 (711-586) | |
| 643-781, gnl|echTel1|scaffold_297281 (21454-21579) | |
| 643-781, gnl|echTel1|scaffold_297281 (21579-21454) | |
| 643-781, gnl|fr1|chrUn (105166541-105166665) | |
| 643-781, gnl|fr1|chrUn (105166666-105166541) | |
| 643-781, gnl|galGal2|chr28 (1508525-1508628) | |
| 643-781, gnl|galGal2|chr28 (1508630-1508505) | |
| 643-781, gnl|Hg17|chr1 (151753348-151753210) | |
| 643-781, gnl|hg17|chr17 (39662694-39662817) | |
| 643-781, gnl|hg17|chrX (63436156-63436281) | |
| 643-781, gnl|loxAfr1|scaffold_6677 (108927-109050) | |
| 643-781, gnl|loxAfr1|scaffold_6677 (109052-108927) | |
| 643-781, gnl|mm7|chr3 (89551554-89551430) | |
| 643-781, gnl|mm7|chr3 (89551430-89551555) | |
| 643-781, gnl|Mm7|chr3 (89551429-89551567) | |
| 643-781, gnl|monDom2|scaffold_59 (2821863-2821743) | |
| 643-781, gnl|monDom2|scaffold_59 (2821741-2821857) | |
| 643-781, gnl|oryCun1|scaffold_147761 (570-694) | |
| 643-781, gnl|oryCun1|scaffold_147761 (694-569) | |
| 643-781, gnl|panTro1|chr19 (42877913-42878036) | |
| 643-781, gnl|panTro1|chrX (65215988-65216113) | |
| 643-781, gnl|rheMac2|chr16 (54321897-54322020) | |
| 643-781, gnl|rheMac2|chrX (63251382-63251507) | |
| 643-781, gnl|rn3|chr2 (181572602-181572727) | |
| 643-781, gnl|rn3|chr4 (107496049-107495925) | |
| 643-781, gnl|tetNig1|chr8 (7775096-7775219) | |
| 643-781, gnl|tetNig1|chr8 (7775221-7775096) | |
| 643-781, gnl|xenTro1|scaffold_1128 (104737-104862) | |
| 643-781, gnl|xenTro1|scaffold_1128 (104862-104737) |
| Aligned organism(s): 73 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 112-283, gnl|bosTau2|chr3 (9056318-9056147) | |
| 112-283, gnl|Hg17|chr1 (151755752-151755581) | |
| 112-283, gnl|Mm7|chr3 (89548839-89549010) | |
| 417-538, gnl|bosTau2|chr3 (9054776-9054655) | |
| 417-538, gnl|canFam2|chr7 (45480142-45479993) | |
| 417-538, gnl|canFam2|chr7 (45480018-45480134) | |
| 417-538, gnl|danRer3|chr16 (26282596-26282726) | |
| 417-538, gnl|danRer3|chr16 (26282700-26282604) | |
| 417-538, gnl|dasNov1|scaffold_12589 (1464-1613) | |
| 417-538, gnl|dasNov1|scaffold_12589 (1588-1472) | |
| 417-538, gnl|echTel1|scaffold_275343 (2956-2809) | |
| 417-538, gnl|echTel1|scaffold_275343 (2832-2948) | |
| 417-538, gnl|fr1|chrUn (105168174-105168318) | |
| 417-538, gnl|fr1|chrUn (105168298-105168182) | |
| 417-538, gnl|galGal2|chr28 (1509210-1509336) | |
| 417-538, gnl|galGal2|chr28 (1509301-1509211) | |
| 417-538, gnl|hg17|chr1 (151754040-151754189) | |
| 417-538, gnl|Hg17|chr1 (151754165-151754044) | |
| 417-538, gnl|hg17|chrX (63435932-63436048) | |
| 417-538, gnl|loxAfr1|scaffold_45679 (33473-33384) | |
| 417-538, gnl|loxAfr1|scaffold_45679 (33393-33485) | |
| 417-538, gnl|mm7|chr3 (89550487-89550338) | |
| 417-538, gnl|mm7|chr3 (89550363-89550479) | |
| 417-538, gnl|Mm7|chr3 (89550360-89550481) | |
| 417-538, gnl|monDom2|scaffold_59 (2820997-2820846) | |
| 417-538, gnl|monDom2|scaffold_59 (2820873-2820989) | |
| 417-538, gnl|oryCun1|scaffold_196054 (8783-8635) | |
| 417-538, gnl|oryCun1|scaffold_196054 (8659-8775) | |
| 417-538, gnl|panTro1|chr1 (133742051-133742200) | |
| 417-538, gnl|panTro1|chrX (65215764-65215880) | |
| 417-538, gnl|rheMac2|chr1 (133512151-133512300) | |
| 417-538, gnl|rheMac2|chrX (63251162-63251278) | |
| 417-538, gnl|rn3|chr2 (181571678-181571530) | |
| 417-538, gnl|rn3|chr2 (181571554-181571670) | |
| 417-538, gnl|tetNig1|chr8 (7776270-7776403) | |
| 417-538, gnl|tetNig1|chr8 (7776374-7776278) | |
| 417-538, gnl|xenTro1|scaffold_1128 (105521-105645) | |
| 417-538, gnl|xenTro1|scaffold_1128 (105625-105510) | |
| 643-781, gnl|bosTau2|chr3 (9053934-9053796) | |
| 643-781, gnl|canFam2|chr7 (45480945-45480822) | |
| 643-781, gnl|canFam2|chr7 (45480820-45480945) | |
| 643-781, gnl|danRer3|chr16 (26271167-26271288) | |
| 643-781, gnl|danRer3|chr16 (26271289-26271164) | |
| 643-781, gnl|dasNov1|scaffold_12589 (586-709) | |
| 643-781, gnl|dasNov1|scaffold_12589 (711-586) | |
| 643-781, gnl|echTel1|scaffold_297281 (21454-21579) | |
| 643-781, gnl|echTel1|scaffold_297281 (21579-21454) | |
| 643-781, gnl|fr1|chrUn (105166541-105166665) | |
| 643-781, gnl|fr1|chrUn (105166666-105166541) | |
| 643-781, gnl|galGal2|chr28 (1508525-1508628) | |
| 643-781, gnl|galGal2|chr28 (1508630-1508505) | |
| 643-781, gnl|Hg17|chr1 (151753348-151753210) | |
| 643-781, gnl|hg17|chr17 (39662694-39662817) | |
| 643-781, gnl|hg17|chrX (63436156-63436281) | |
| 643-781, gnl|loxAfr1|scaffold_6677 (108927-109050) | |
| 643-781, gnl|loxAfr1|scaffold_6677 (109052-108927) | |
| 643-781, gnl|mm7|chr3 (89551554-89551430) | |
| 643-781, gnl|mm7|chr3 (89551430-89551555) | |
| 643-781, gnl|Mm7|chr3 (89551429-89551567) | |
| 643-781, gnl|monDom2|scaffold_59 (2821863-2821743) | |
| 643-781, gnl|monDom2|scaffold_59 (2821741-2821857) | |
| 643-781, gnl|oryCun1|scaffold_147761 (570-694) | |
| 643-781, gnl|oryCun1|scaffold_147761 (694-569) | |
| 643-781, gnl|panTro1|chr19 (42877913-42878036) | |
| 643-781, gnl|panTro1|chrX (65215988-65216113) | |
| 643-781, gnl|rheMac2|chr16 (54321897-54322020) | |
| 643-781, gnl|rheMac2|chrX (63251382-63251507) | |
| 643-781, gnl|rn3|chr2 (181572602-181572727) | |
| 643-781, gnl|rn3|chr4 (107496049-107495925) | |
| 643-781, gnl|tetNig1|chr8 (7775096-7775219) | |
| 643-781, gnl|tetNig1|chr8 (7775221-7775096) | |
| 643-781, gnl|xenTro1|scaffold_1128 (104737-104862) | |
| 643-781, gnl|xenTro1|scaffold_1128 (104862-104737) |