Non-Coding RNA Search

Ss1.1-LyN1-MLN01H040051.5

Sequence:


               
               GAGGTGCTGGCAGAGAGAGCGTAGTGTTCGCCGGCATAGAGCTAGAAGTGTCAGCGGCGG
CCCCGGCCCGGGCCCTGGCTGGAGACCGACTCGGAGCAACCACGCGCCCACTGGCAGAGG
GCGGCGTGCCCGCGGTGCAACATGCAGATAGGCGCCCGGCGCCCTGACGACCCCTCCCGA
GAAAAGGAGGCCGGGGCGGCGCTGGGGCGGCGGGGAGCATGAGGGAGGCTGGGGGGCGGC
TCGGCTCGGAACGCTGCTAGGGAGCGGCGCGCGCCGCACACTCGCCGGGGCGCAGCGGAG
GGCGGGGAGCCGGGCAGGTCGCGCCAGCGGGCGGGAGCCGGCTGCCCGGAGCTGTTCTGA
TTTCCGACGCTGACGCAAGGGGCCCGGAGTAGCCCCCGGCCCCGGCGTGCAGCCAACATG
GGCAATGCTGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTACCTTTG
AAGCTGCCGATGCCCGAACCAGGTGAACTGGAGGAGCGATTTGCCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGTGCTGGCAGAGAGAGCGTAGTGTTCGCCGGCATAGAGCTAGAAGTGTCAGCGGCGG
CCCCGGCCCGGGCCCTGGCTGGAGACCGACTCGGAGCAACCACGCGCCCACTGGCAGAGG
GCGGCGTGCCCGCGGTGCAACATGCAGATAGGCGCCCGGCGCCCTGACGACCCCTCCCGA
GAAAAGGAGGCCGGGGCGGCGCTGGGGCGGCGGGGAGCATGAGGGAGGCTGGGGGGCGGC
TCGGCTCGGAACGCTGCTAGGGAGCGGCGCGCGCCGCACACTCGCCGGGGCGCAGCGGAG
GGCGGGGAGCCGGGCAGGTCGCGCCAGCGGGCGGGAGCCGGCTGCCCGGAGCTGTTCTGA
TTTCCGACGCTGACGCAAGGGGCCCGGAGTAGCCCCCGGCCCCGGCGTGCAGCCAACATG
GGCAATGCTGGGAGCATGGATTCGCAGCAGACCGATTTCAGGGCGCACAACGTACCTTTG
AAGCTGCCGATGCCCGAACCAGGTGAACTGGAGGAGCGATTTGCCATC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               308-427, - strand, RNAz p=0.863362

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               308-427, - strand, RNAz p=0.863362

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-528, gnl|bosTau2|chr2 (29761230-29761763)
               

               
               2-528, gnl|Hg17|chr2 (153017205-153017736)
               

               
               2-528, gnl|Mm7|chr2 (52865104-52865564)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-528, gnl|bosTau2|chr2 (29761230-29761763)
               

               
               2-528, gnl|Hg17|chr2 (153017205-153017736)
               

               
               2-528, gnl|Mm7|chr2 (52865104-52865564)

	2-528, gnl\|bosTau2\|chr2 (29761230-29761763)
	2-528, gnl\|Hg17\|chr2 (153017205-153017736)
	2-528, gnl\|Mm7\|chr2 (52865104-52865564)