Ss1.1-LyN1-MLN01H060085.5
               |  | TTTATTTATTTATTGCTTTTTAGAACTTCTGTATGCTGTAGGTGTGGCCATAAAAAGCAA
AAAAAAAAGAAAAAAGTGAATCATTCCCAAGGTTATAGACGCAGTAACGGTAGAGTTGAG
GCCAGTCTGCAGACCTGCTAGACCCCAAAGTCTGGTCACCAGGAAGTCAGTGGATGGCGG
ATGTCAGAAGTCCCCAGAGTAATAAAAAAGAGAGGTTCTTTCCAGCAGTAATTGAGGTAG
ACGGGGTGGTGCAGAGGTTGTCCGGTGCCCGACCACCTGTGTTTCTGTCCCAGCTCTGTC
CCTTGCTAGTAGTGTGACCTTGGCCAGGTCATCCCACTTCCCTGTGCCTTGCTTTCCTAG
ACAATGAAATGAGCAGCATACGGCTACAGTGAATCACGATGGCTGGTTTTACTTTGCTTT
TTAAAGTAAAACAAATATTCAGACCCCAACTTTTCTACGTGTAGCTTCAACCTACTTTTA
GTGGGAAAAAAAAAAAAAATCCATAGCCACACGTCCCTTTACGTCGTGTTCCTTTTTTCC
TCTATTTCCTCATAAGGCAGCATGGTAGGGACCAGCCAACCATGCCTATCTCTGAGCAGC
CTGTGAGCTAAGAATGGCTTTGTATTTTGTAAAGATTGTTTGGGAAAAAAAAAAAAAAAG
TGTGACAGAGACTGCATGTGACCCACCAAGCCTAAAATATTTACTATCTGGTCCTTTCCA
GAAAAAGTTTGCCAGCCTCTGAGAGAACATGGGTTGTAGAGCCAACCAGCTAGGTTTGGG
TCCTGTACTGGCTGGTCAGGGCTCCGTTAGACCTTTAGACCGTGAAAGCACCCTGGGGCC
TTCCCTGGGCAGGAGCAGGGAGAGGGGGGCTCATAACCATTGTGGTGGCGGCAGCAGGGC
CTGGAGCAGGAGCAGAGGTGGTGGCGGTGGATTTGTTGTGTGCTTACTCTGGGCAAGCAC
AGTGGTAAGAGCTTCATCTCCCTGAACCCCCTCGACAGCCCTCTGAAGGATGCATATTTG
TGAACACTTGTGATGCAGAAGCTGCTTGGGGAGCAGGTCACTAACTTGAAGTGACACGGG
GTTGGGCGGGGAGATGGAGTGGGGATTTGAACCCAGGAGGTCTGAGTCTACCTCTCCTCC
TCTGCCCTTCCTGTTGCCATTAGCTCACCTTTCAGACAAAGGAACCTTGGGCCGTGCCTT
TCCCCCATTTACTTTCCCCTAGTTCTCCGGCAAAATTGTGAAAGAGAGACGAAAAAAGGG
AAGAGCCATGAGAAACACCTCTGATGTGAACATCTAAAATTTGGTTTCCATCACCCATCC
AGCCAGCAAACACAGCCCAGCACCAGAACCCCTGAACGCCCACAGCTTTGACAGGGACAA
CTGAAGCAAACCCTAAGTCCTTGGGTCCCTCAAATTCACTGTCACAAGGAGGCACACAGA
GAAAGGAGCTCA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | TTTATTTATTTATTGCTTTTTAGAACTTCTGTATGCTGTAGGTGTGGCCATAAAAAGCAA
AAAAAAAAGAAAAAAGTGAATCATTCCCAAGGTTATAGACGCAGTAACGGTAGAGTTGAG
GCCAGTCTGCAGACCTGCTAGACCCCAAAGTCTGGTCACCAGGAAGTCAGTGGATGGCGG
ATGTCAGAAGTCCCCAGAGTAATAAAAAAGAGAGGTTCTTTCCAGCAGTAATTGAGGTAG
ACGGGGTGGTGCAGAGGTTGTCCGGTGCCCGACCACCTGTGTTTCTGTCCCAGCTCTGTC
CCTTGCTAGTAGTGTGACCTTGGCCAGGTCATCCCACTTCCCTGTGCCTTGCTTTCCTAG
ACAATGAAATGAGCAGCATACGGCTACAGTGAATCACGATGGCTGGTTTTACTTTGCTTT
TTAAAGTAAAACAAATATTCAGACCCCAACTTTTCTACGTGTAGCTTCAACCTACTTTTA
GTGGGAAAAAAAAAAAAAATCCATAGCCACACGTCCCTTTACGTCGTGTTCCTTTTTTCC
TCTATTTCCTCATAAGGCAGCATGGTAGGGACCAGCCAACCATGCCTATCTCTGAGCAGC
CTGTGAGCTAAGAATGGCTTTGTATTTTGTAAAGATTGTTTGGGAAAAAAAAAAAAAAAG
TGTGACAGAGACTGCATGTGACCCACCAAGCCTAAAATATTTACTATCTGGTCCTTTCCA
GAAAAAGTTTGCCAGCCTCTGAGAGAACATGGGTTGTAGAGCCAACCAGCTAGGTTTGGG
TCCTGTACTGGCTGGTCAGGGCTCCGTTAGACCTTTAGACCGTGAAAGCACCCTGGGGCC
TTCCCTGGGCAGGAGCAGGGAGAGGGGGGCTCATAACCATTGTGGTGGCGGCAGCAGGGC
CTGGAGCAGGAGCAGAGGTGGTGGCGGTGGATTTGTTGTGTGCTTACTCTGGGCAAGCAC
AGTGGTAAGAGCTTCATCTCCCTGAACCCCCTCGACAGCCCTCTGAAGGATGCATATTTG
TGAACACTTGTGATGCAGAAGCTGCTTGGGGAGCAGGTCACTAACTTGAAGTGACACGGG
GTTGGGCGGGGAGATGGAGTGGGGATTTGAACCCAGGAGGTCTGAGTCTACCTCTCCTCC
TCTGCCCTTCCTGTTGCCATTAGCTCACCTTTCAGACAAAGGAACCTTGGGCCGTGCCTT
TCCCCCATTTACTTTCCCCTAGTTCTCCGGCAAAATTGTGAAAGAGAGACGAAAAAAGGG
AAGAGCCATGAGAAACACCTCTGATGTGAACATCTAAAATTTGGTTTCCATCACCCATCC
AGCCAGCAAACACAGCCCAGCACCAGAACCCCTGAACGCCCACAGCTTTGACAGGGACAA
CTGAAGCAAACCCTAAGTCCTTGGGTCCCTCAAATTCACTGTCACAAGGAGGCACACAGA
GAAAGGAGCTCA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map