Ss1.1-LyN1-MLN01H080102.5
               |  | CGTGTTTTACTGCTCCTTTTTCTTTCTCTGCCCGTTCTATTTTTCTCTGCTTCTTACCAG
CAAATCCACTTCCAGCTCCAAACTGATAAAATAAAATGAGGGTTTAGTTCTTGTGTGATT
TTTGCCTTTATCATTTTCCACCAGGCTTATCATAAACCCGATTGTTGGTAATGATTAGGA
GAAAACATCAAACGTACTCACTCCACGTGACCTACCCCAGATACGGTTAAAGGAAAAACC
CCAATATTTGCTAAAATGAGAACATTTCTAAGAAATCACAGTAACATTGTTTCGAGTACT
TTGTATATGCCAGGAAGTTTTCTAAGCACATTATGTGTGTTCAGACATAAAATTGCTTAG
AACTCAACACCCCAGGTGAAGTAAGAATTATGGTTCTTGTCTGCAGCAAGCAGAACCATA
TATAGGGCACCCATCTTGTTTCTAGGAAGGGGGATTTTAAAAATCACCTGTTTTCTTTTA
GTCAGTATTGGTGTTTGAATAAAATAGGTCGGTTCAATTTCCATCTCTAGAATGTCAGAG
GGCCTGTTTTCTTGGGTCTTCCCCAGATCCATTTGTTACAGTAGGTTTGCTGTAAAATTT
TCAGGCCGCTGTTGAGCATTTTGTATCTGGTGATTTTAACACCACCCTTCTTTCCGTTCC
ACCCCCTCGAGTTCACTCCAGGTGCCCTTCGCAAATGACTCCCAAGGCATTTAAGTGGTC
AAAGCGCATTGACCAATGAGGAGAGGTGTGCCCTGTGTTACAGAGTTA | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CGTGTTTTACTGCTCCTTTTTCTTTCTCTGCCCGTTCTATTTTTCTCTGCTTCTTACCAG
CAAATCCACTTCCAGCTCCAAACTGATAAAATAAAATGAGGGTTTAGTTCTTGTGTGATT
TTTGCCTTTATCATTTTCCACCAGGCTTATCATAAACCCGATTGTTGGTAATGATTAGGA
GAAAACATCAAACGTACTCACTCCACGTGACCTACCCCAGATACGGTTAAAGGAAAAACC
CCAATATTTGCTAAAATGAGAACATTTCTAAGAAATCACAGTAACATTGTTTCGAGTACT
TTGTATATGCCAGGAAGTTTTCTAAGCACATTATGTGTGTTCAGACATAAAATTGCTTAG
AACTCAACACCCCAGGTGAAGTAAGAATTATGGTTCTTGTCTGCAGCAAGCAGAACCATA
TATAGGGCACCCATCTTGTTTCTAGGAAGGGGGATTTTAAAAATCACCTGTTTTCTTTTA
GTCAGTATTGGTGTTTGAATAAAATAGGTCGGTTCAATTTCCATCTCTAGAATGTCAGAG
GGCCTGTTTTCTTGGGTCTTCCCCAGATCCATTTGTTACAGTAGGTTTGCTGTAAAATTT
TCAGGCCGCTGTTGAGCATTTTGTATCTGGTGATTTTAACACCACCCTTCTTTCCGTTCC
ACCCCCTCGAGTTCACTCCAGGTGCCCTTCGCAAATGACTCCCAAGGCATTTAAGTGGTC
AAAGCGCATTGACCAATGAGGAGAGGTGTGCCCTGTGTTACAGAGTTA | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map