Non-Coding RNA Search

Ss1.1-LyN1-MLN01H120005.5

Sequence:


               
               AGCAAAATTTATGAAAGCAGAACCAGATACAGTGATAGTCTACAATATAAATACCCACAG
AGTAATAACTGTTAAAGTGTTGATTAAGTAAATAATTTGAAATCACCAAGTACAGTTGTA
TGAGGTTTTGTGGTCAGAGAGTGTTCCATGGAAGCTTAATGCTGAAAGGAGGTCTTGGCA
ATTCAACTGAAAGCTAGGTGAGTTTGTAACATTGGTAAAACCAAATTTGAGAATGGCAGA
TTTAACTTTTAAAGGTCAGATATTAAAATGTTGCCCTTTGACCATGGAAGAAAAGGCCTT
GGCCTTGAGAAGAACTTGGGTAGGGCTAGGCTCTTATAAGCTAATAAATAGGAAATGCCA
TTTCCATGCTGCCTTCTACCCAAGAAGGGGATAAAATGCTGTGAACTTTGACTATTGTCA
GTCATTGATCATGCCTCTCTAAATGTGAATGACCTTAAATATATATACCATCTTTTGGCC
CAGTAGCTTATCATATAATTTCATTCATCTCATCAGTAAATGAATGTACACAAATATGAA
TGAATATAAATGTACAGGTATCCTTCTCTCTAAATGGGAAATGGGAAAGCTGAGGCTTAG
TGTTACCTATATAATCAGTGAGAATCAAAACCAGAAATAAGCTTGATGTCTGGAATCCAC
AGCCTGTTTTTTCCAGGGCCAAGTGGAGCAAGTTATGTTTAGTTTGATTTTAATCCATTT
CAGAATCTGGACCTCTTACAAAATGTCTGATTGTATCTTGTTTTTCCTGTAGATTTCTAG
AAAGGGAGTTACAGTTGGGGGTGGAGGGTATATCTATTTTCTGACAATGAAATGTTTTTG
CTCTTATAATCTCATCAGATGAATTACCAGAAAATTCATATTCTGTGTCAAACTCACACA
AGGTGAGTAATGACAGGTGGCATTATATTCACAAAATGTACCTTCTTGCTGTGTGTTCCT
CACACGTCAGACTAAAGTTGCTTTTACAAAGCTGTAACTGGAGATTACATAAGGTCCTGC
CATGAGGTTTGTAGATTTTTGACACCAGAGAAGCAGAAGCAACAGCTCCAAAGGAGTCTC
TACCCTTTGTTGTGTTTGAGCAGCTGCCATTTCGAGAAATCCCAGGACAAGGTAGGAAAG
CCACAATTTGAACAGAAGATGCAGTGGTCTGAGCAAAACATAGTTCATCTTTCATTTCTC
TTCATGTTGTAATCCTTCTGTCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCAAAATTTATGAAAGCAGAACCAGATACAGTGATAGTCTACAATATAAATACCCACAG
AGTAATAACTGTTAAAGTGTTGATTAAGTAAATAATTTGAAATCACCAAGTACAGTTGTA
TGAGGTTTTGTGGTCAGAGAGTGTTCCATGGAAGCTTAATGCTGAAAGGAGGTCTTGGCA
ATTCAACTGAAAGCTAGGTGAGTTTGTAACATTGGTAAAACCAAATTTGAGAATGGCAGA
TTTAACTTTTAAAGGTCAGATATTAAAATGTTGCCCTTTGACCATGGAAGAAAAGGCCTT
GGCCTTGAGAAGAACTTGGGTAGGGCTAGGCTCTTATAAGCTAATAAATAGGAAATGCCA
TTTCCATGCTGCCTTCTACCCAAGAAGGGGATAAAATGCTGTGAACTTTGACTATTGTCA
GTCATTGATCATGCCTCTCTAAATGTGAATGACCTTAAATATATATACCATCTTTTGGCC
CAGTAGCTTATCATATAATTTCATTCATCTCATCAGTAAATGAATGTACACAAATATGAA
TGAATATAAATGTACAGGTATCCTTCTCTCTAAATGGGAAATGGGAAAGCTGAGGCTTAG
TGTTACCTATATAATCAGTGAGAATCAAAACCAGAAATAAGCTTGATGTCTGGAATCCAC
AGCCTGTTTTTTCCAGGGCCAAGTGGAGCAAGTTATGTTTAGTTTGATTTTAATCCATTT
CAGAATCTGGACCTCTTACAAAATGTCTGATTGTATCTTGTTTTTCCTGTAGATTTCTAG
AAAGGGAGTTACAGTTGGGGGTGGAGGGTATATCTATTTTCTGACAATGAAATGTTTTTG
CTCTTATAATCTCATCAGATGAATTACCAGAAAATTCATATTCTGTGTCAAACTCACACA
AGGTGAGTAATGACAGGTGGCATTATATTCACAAAATGTACCTTCTTGCTGTGTGTTCCT
CACACGTCAGACTAAAGTTGCTTTTACAAAGCTGTAACTGGAGATTACATAAGGTCCTGC
CATGAGGTTTGTAGATTTTTGACACCAGAGAAGCAGAAGCAACAGCTCCAAAGGAGTCTC
TACCCTTTGTTGTGTTTGAGCAGCTGCCATTTCGAGAAATCCCAGGACAAGGTAGGAAAG
CCACAATTTGAACAGAAGATGCAGTGGTCTGAGCAAAACATAGTTCATCTTTCATTTCTC
TTCATGTTGTAATCCTTCTGTCAT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-570, gnl|bosTau2|chr1 (33710449-33709890)
               

               
               1-570, gnl|Hg17|chr3 (115624869-115624281)
               

               
               1-570, gnl|Mm7|chr16 (43299626-43300145)
               


               
               596-1109, gnl|bosTau2|chr1 (33709887-33709388)
               

               
               596-1109, gnl|Hg17|chr3 (115624278-115623802)
               

               
               596-1109, gnl|Mm7|chr16 (43300216-43300731)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-570, gnl|bosTau2|chr1 (33710449-33709890)
               

               
               1-570, gnl|Hg17|chr3 (115624869-115624281)
               

               
               1-570, gnl|Mm7|chr16 (43299626-43300145)
               


               
               596-1109, gnl|bosTau2|chr1 (33709887-33709388)
               

               
               596-1109, gnl|Hg17|chr3 (115624278-115623802)
               

               
               596-1109, gnl|Mm7|chr16 (43300216-43300731)

	1-570, gnl\|bosTau2\|chr1 (33710449-33709890)
	1-570, gnl\|Hg17\|chr3 (115624869-115624281)
	1-570, gnl\|Mm7\|chr16 (43299626-43300145)

	596-1109, gnl\|bosTau2\|chr1 (33709887-33709388)
	596-1109, gnl\|Hg17\|chr3 (115624278-115623802)
	596-1109, gnl\|Mm7\|chr16 (43300216-43300731)