Ss1.1-LyN3-AR096H07LNEH07S.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGGATATTGCCCACAACAACCTCATGGCCATGGCCCAGAAGATTGGCGATCATCTGTTC TGGGGCACAGTCCCCAGTTCTCAGAGCAACACCTTGTCACCCACCCCGGCTCCTCAGAGA CCAACAGACCCCATGCCCCAGGCCCCGGCCCTGTGGATTGAAACCACAGCCTATGCCCTG CTGCACCTGCTGATCCGAGAGGGCAAGGCCGAGATGGCTGACCAGACCGCATCCTGGCTG ACCCGCCAGGGCAGCTACAAAGGGGGATTCCGCAGCACCCAGGACACAGTGATCGCCCTG GACGCCCTGTCTGCGTACTGGATCTTGTCGCACACCACCGAGGAGAAGGAGCTCAACGTG ACCCTCAGCTCCATGTCCCGCGGGGGGCTCAAGTCCCACGTGGTGCGGCTGACCAACCAC CAAGTGAAAGGCCTGGAGGAGGAGCTGCAGTTTTCCTTGGGCAGCAAGATTAATGTGAAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGGATATTGCCCACAACAACCTCATGGCCATGGCCCAGAAGATTGGCGATCATCTGTTC TGGGGCACAGTCCCCAGTTCTCAGAGCAACACCTTGTCACCCACCCCGGCTCCTCAGAGA CCAACAGACCCCATGCCCCAGGCCCCGGCCCTGTGGATTGAAACCACAGCCTATGCCCTG CTGCACCTGCTGATCCGAGAGGGCAAGGCCGAGATGGCTGACCAGACCGCATCCTGGCTG ACCCGCCAGGGCAGCTACAAAGGGGGATTCCGCAGCACCCAGGACACAGTGATCGCCCTG GACGCCCTGTCTGCGTACTGGATCTTGTCGCACACCACCGAGGAGAAGGAGCTCAACGTG ACCCTCAGCTCCATGTCCCGCGGGGGGCTCAAGTCCCACGTGGTGCGGCTGACCAACCAC CAAGTGAAAGGCCTGGAGGAGGAGCTGCAGTTTTCCTTGGGCAGCAAGATTAATGTGAAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 128-247, - strand, RNAz p=0.635879 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 128-247, - strand, RNAz p=0.635879 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 49-283, gnl|bosTau2|chr23 (23581995-23582229) | |
| 49-283, gnl|canFam2|chr12 (4445077-4445365) | |
| 49-283, gnl|canFam2|chr12 (4445078-4445388) | |
| 49-283, gnl|dasNov1|scaffold_128364 (4319-4604) | |
| 49-283, gnl|dasNov1|scaffold_128364 (4323-4629) | |
| 49-283, gnl|echTel1|scaffold_275600 (4979-4681) | |
| 49-283, gnl|echTel1|scaffold_275600 (4979-4656) | |
| 49-283, gnl|hg17|chr6 (32072541-32072838) | |
| 49-283, gnl|hg17|chr6 (32105279-32105602) | |
| 49-283, gnl|Hg17|chr6 (32105321-32105555) | |
| 49-283, gnl|loxAfr1|scaffold_97506 (569-272) | |
| 49-283, gnl|loxAfr1|scaffold_97506 (569-252) | |
| 49-283, gnl|mm7|chr17 (32908783-32908485) | |
| 49-283, gnl|mm7|chr17 (32819396-32819069) | |
| 49-283, gnl|Mm7|chr17 (32819351-32819117) | |
| 49-283, gnl|monDom2|scaffold_42 (17347061-17346759) | |
| 49-283, gnl|monDom2|scaffold_42 (17347061-17346729) | |
| 49-283, gnl|oryCun1|scaffold_210031 (13921-14218) | |
| 49-283, gnl|oryCun1|scaffold_210031 (13913-14241) | |
| 49-283, gnl|panTro1|chr5 (32467867-32468166) | |
| 49-283, gnl|panTro1|chr5 (32467867-32468189) | |
| 49-283, gnl|rn3|chr20 (4115898-4116197) | |
| 49-283, gnl|rn3|chr20 (4310425-4310748) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 49-283, gnl|bosTau2|chr23 (23581995-23582229) | |
| 49-283, gnl|canFam2|chr12 (4445077-4445365) | |
| 49-283, gnl|canFam2|chr12 (4445078-4445388) | |
| 49-283, gnl|dasNov1|scaffold_128364 (4319-4604) | |
| 49-283, gnl|dasNov1|scaffold_128364 (4323-4629) | |
| 49-283, gnl|echTel1|scaffold_275600 (4979-4681) | |
| 49-283, gnl|echTel1|scaffold_275600 (4979-4656) | |
| 49-283, gnl|hg17|chr6 (32072541-32072838) | |
| 49-283, gnl|hg17|chr6 (32105279-32105602) | |
| 49-283, gnl|Hg17|chr6 (32105321-32105555) | |
| 49-283, gnl|loxAfr1|scaffold_97506 (569-272) | |
| 49-283, gnl|loxAfr1|scaffold_97506 (569-252) | |
| 49-283, gnl|mm7|chr17 (32908783-32908485) | |
| 49-283, gnl|mm7|chr17 (32819396-32819069) | |
| 49-283, gnl|Mm7|chr17 (32819351-32819117) | |
| 49-283, gnl|monDom2|scaffold_42 (17347061-17346759) | |
| 49-283, gnl|monDom2|scaffold_42 (17347061-17346729) | |
| 49-283, gnl|oryCun1|scaffold_210031 (13921-14218) | |
| 49-283, gnl|oryCun1|scaffold_210031 (13913-14241) | |
| 49-283, gnl|panTro1|chr5 (32467867-32468166) | |
| 49-283, gnl|panTro1|chr5 (32467867-32468189) | |
| 49-283, gnl|rn3|chr20 (4115898-4116197) | |
| 49-283, gnl|rn3|chr20 (4310425-4310748) |