Ss1.1-Lym1-jns31_G07.f.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AATGACCCCTCGGCCATCATGGCACCCTTTTACCAGTGGATGGACACAGAGAATTTTGTG CTACCCGATGATGACCGCCGGGGCATCCAGCAACTTTATGGAAGTGAGTCAGGGTTTCCC ACCAAGATGCCTCCTCAACCCAGGACCACCTCCAAGCCCTCTGTTCCTGATAAGCCCAAA AACCCCACCTATGGGCCCAACATCTGTGATGGGAACTTTGACACCGTGGCCATGCTCCGA GGGGAGATGTTTGTTTTCAAGGAACGCTGGTTCTGGCGGGTGAGGAAAAACCAGGTGATG GATGGATACCCCATGCCCATCGGCCAGTTCTGGCGGGGCCTGCCAGCATCCATCAACACT GCCTACGAGAGGAAAGACGGCAAATTCGTCTTCTTCAAAGGAGACAAGCACTGGGTGTTT GATGAAGCTTCCCTGGAGCCTGGCTACCCCAAGCACATTAAGGAGCTGGGCCGAGGACTG CCTACTGACAAGATTGATGCTGCTCTCTTCTGGATGCCCAACGGAAAGACCTATTTCTTC CGGGGAAACAAGTACTACCGTTTCAACGAGGAGCTCAGGGCAGTGGACAGCGAGTACCCC AAAAACATCAAAGTCTGGGAAGGAATCCCTGAGTCTCCCAGGGGGTCATTCATGGGCAGC GATGAAGTCTTCACTTACTTCTACAAGGGGAACAAATACTGGAAGTTCAACAACCAGAAG CTGAAGGTCGAGCCGGGCTACCCCAAGTCAGCCCTGCGGGACTGGATGGGCTGCCCGTCG GGGGGCCGGCCGGATGAGGGGACTGAGGAGGAGACAGAGGTGATCATCATTGAGGTGGAC GAGGAAGGCAGCGGGGCAGTGAGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AATGACCCCTCGGCCATCATGGCACCCTTTTACCAGTGGATGGACACAGAGAATTTTGTG CTACCCGATGATGACCGCCGGGGCATCCAGCAACTTTATGGAAGTGAGTCAGGGTTTCCC ACCAAGATGCCTCCTCAACCCAGGACCACCTCCAAGCCCTCTGTTCCTGATAAGCCCAAA AACCCCACCTATGGGCCCAACATCTGTGATGGGAACTTTGACACCGTGGCCATGCTCCGA GGGGAGATGTTTGTTTTCAAGGAACGCTGGTTCTGGCGGGTGAGGAAAAACCAGGTGATG GATGGATACCCCATGCCCATCGGCCAGTTCTGGCGGGGCCTGCCAGCATCCATCAACACT GCCTACGAGAGGAAAGACGGCAAATTCGTCTTCTTCAAAGGAGACAAGCACTGGGTGTTT GATGAAGCTTCCCTGGAGCCTGGCTACCCCAAGCACATTAAGGAGCTGGGCCGAGGACTG CCTACTGACAAGATTGATGCTGCTCTCTTCTGGATGCCCAACGGAAAGACCTATTTCTTC CGGGGAAACAAGTACTACCGTTTCAACGAGGAGCTCAGGGCAGTGGACAGCGAGTACCCC AAAAACATCAAAGTCTGGGAAGGAATCCCTGAGTCTCCCAGGGGGTCATTCATGGGCAGC GATGAAGTCTTCACTTACTTCTACAAGGGGAACAAATACTGGAAGTTCAACAACCAGAAG CTGAAGGTCGAGCCGGGCTACCCCAAGTCAGCCCTGCGGGACTGGATGGGCTGCCCGTCG GGGGGCCGGCCGGATGAGGGGACTGAGGAGGAGACAGAGGTGATCATCATTGAGGTGGAC GAGGAAGGCAGCGGGGCAGTGAGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 750-864, + strand, RNAz p=0.886955 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 750-864, + strand, RNAz p=0.886955 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 100-262, gnl|bosTau2|chr10 (14161928-14161766) | |
| 100-262, gnl|Hg17|chr14 (22382758-22382920) | |
| 386-658, gnl|bosTau2|chr13 (45194497-45194225) | |
| 386-658, gnl|Hg17|chr20 (33322771-33323043) | |
| 386-658, gnl|Mm7|chr2 (155554740-155555011) | |
| 399-554, gnl|bosTau2|chr10 (14161127-14160972) | |
| 399-554, gnl|canFam2|chr8 (6194057-6194259) | |
| 399-554, gnl|danRer3|chr2 (34204831-34204639) | |
| 399-554, gnl|dasNov1|scaffold_54810 (7725-7523) | |
| 399-554, gnl|echTel1|scaffold_244123 (408-211) | |
| 399-554, gnl|fr1|chrUn (68367641-68367844) | |
| 399-554, gnl|hg17|chr14 (22383647-22383848) | |
| 399-554, gnl|Hg17|chr14 (22383677-22383832) | |
| 399-554, gnl|loxAfr1|scaffold_27401 (5432-5586) | |
| 399-554, gnl|mm7|chr14 (49306323-49306525) | |
| 399-554, gnl|Mm7|chr14 (49306354-49306509) | |
| 399-554, gnl|monDom2|scaffold_12 (27025580-27025377) | |
| 399-554, gnl|oryCun1|scaffold_207641 (44956-45121) | |
| 399-554, gnl|panTro1|chr15 (21347199-21347400) | |
| 399-554, gnl|rheMac2|chr7 (85657255-85657456) | |
| 399-554, gnl|rn3|chr15 (32516831-32517033) | |
| 399-554, gnl|tetNig1|chr15 (2164655-2164450) | |
| 399-554, gnl|xenTro1|scaffold_963 (232318-232525) | |
| 663-864, gnl|bosTau2|chr10 (14160655-14160451) | |
| 663-864, gnl|Hg17|chr14 (22384752-22384953) | |
| 663-864, gnl|Mm7|chr14 (49307411-49307612) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 100-262, gnl|bosTau2|chr10 (14161928-14161766) | |
| 100-262, gnl|Hg17|chr14 (22382758-22382920) | |
| 386-658, gnl|bosTau2|chr13 (45194497-45194225) | |
| 386-658, gnl|Hg17|chr20 (33322771-33323043) | |
| 386-658, gnl|Mm7|chr2 (155554740-155555011) | |
| 399-554, gnl|bosTau2|chr10 (14161127-14160972) | |
| 399-554, gnl|canFam2|chr8 (6194057-6194259) | |
| 399-554, gnl|danRer3|chr2 (34204831-34204639) | |
| 399-554, gnl|dasNov1|scaffold_54810 (7725-7523) | |
| 399-554, gnl|echTel1|scaffold_244123 (408-211) | |
| 399-554, gnl|fr1|chrUn (68367641-68367844) | |
| 399-554, gnl|hg17|chr14 (22383647-22383848) | |
| 399-554, gnl|Hg17|chr14 (22383677-22383832) | |
| 399-554, gnl|loxAfr1|scaffold_27401 (5432-5586) | |
| 399-554, gnl|mm7|chr14 (49306323-49306525) | |
| 399-554, gnl|Mm7|chr14 (49306354-49306509) | |
| 399-554, gnl|monDom2|scaffold_12 (27025580-27025377) | |
| 399-554, gnl|oryCun1|scaffold_207641 (44956-45121) | |
| 399-554, gnl|panTro1|chr15 (21347199-21347400) | |
| 399-554, gnl|rheMac2|chr7 (85657255-85657456) | |
| 399-554, gnl|rn3|chr15 (32516831-32517033) | |
| 399-554, gnl|tetNig1|chr15 (2164655-2164450) | |
| 399-554, gnl|xenTro1|scaffold_963 (232318-232525) | |
| 663-864, gnl|bosTau2|chr10 (14160655-14160451) | |
| 663-864, gnl|Hg17|chr14 (22384752-22384953) | |
| 663-864, gnl|Mm7|chr14 (49307411-49307612) |