Ss1.1-Mixc-0025a06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCACACACACATACACTTTGATTCTTCTCTCCCACCCCTTCTTCTCTCTTCTTCTGTTT GCCTAACTCCCCCGCCCTGCTGGCCTCCCCTTTCCTCTCTTCCCCTTATTATTATTTTTA GCGTGTGCGTGTGAACGCTTTTGGAGAGCTGAAGGGGATTTTTTTTCTTCTTCTTCTCCT GACTTGAACATAGGGTGACTTTTAATTTTATTTTTTGGTGTGGATTATCTCTTTGGACCG CGCCGGACTTGGCCTCGGGAAAGCAACCGAAGCTGTCGGAGGCTGCCGGTGCACAACGCT CTGCTCTACAGAAGGGGGTCCCCCGCCCTCTTTCCACTTTTTTTGTTCTTCCCCTCCTTT CTCTCTCTCCCTCTCTCTCTCTCCATTCCCTCCCCCACTTCCCCACTCGGCTCCTCTCCC CCCTCGCGCCCACAGCGTTTGGTGTTGATTCGAGCGGGAAGAGGGGGGTGGGTGGGATCG GAGGGGGAGACCATGACCTCCAGCTACGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGC GGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTTCTCGGTC AGTCACCTGCTAGACCTGGAGGAAGCCGGGGACATGGTGGCGGCGCAAGCGGACGAGAGC GTGGGCGAAGCGGGCCGGAGCCTCCTGGAGTCGCCGGGACTCACCAGCGGCAGCGACACC CCGCAACAGGACAATGATCAGCTGAACTCAGAGGAAAAGAAGAAGAGAAAGCAGCGGAGA AACAGGACAACCTTCAACAGCAGTCAGCTGCAGGCTTTGGAGCGTGTCTTTGAGAGGACA CACTACCCAGATGCTTTTGTGCGAGAAGACCTTGCCCGCCGGGTGAATCTCACCGAGGCC AGAGTGCAGGTGTGGTTTCAGAACCGAAGAGCCAAATTTCGCAGGAACGAGAGAGCCATG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCACACACACATACACTTTGATTCTTCTCTCCCACCCCTTCTTCTCTCTTCTTCTGTTT GCCTAACTCCCCCGCCCTGCTGGCCTCCCCTTTCCTCTCTTCCCCTTATTATTATTTTTA GCGTGTGCGTGTGAACGCTTTTGGAGAGCTGAAGGGGATTTTTTTTCTTCTTCTTCTCCT GACTTGAACATAGGGTGACTTTTAATTTTATTTTTTGGTGTGGATTATCTCTTTGGACCG CGCCGGACTTGGCCTCGGGAAAGCAACCGAAGCTGTCGGAGGCTGCCGGTGCACAACGCT CTGCTCTACAGAAGGGGGTCCCCCGCCCTCTTTCCACTTTTTTTGTTCTTCCCCTCCTTT CTCTCTCTCCCTCTCTCTCTCTCCATTCCCTCCCCCACTTCCCCACTCGGCTCCTCTCCC CCCTCGCGCCCACAGCGTTTGGTGTTGATTCGAGCGGGAAGAGGGGGGTGGGTGGGATCG GAGGGGGAGACCATGACCTCCAGCTACGGGCACGTTCTGGAGCGGCAACCGGCGCTGGGC GGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCGAAAAAGAACTTCTCGGTC AGTCACCTGCTAGACCTGGAGGAAGCCGGGGACATGGTGGCGGCGCAAGCGGACGAGAGC GTGGGCGAAGCGGGCCGGAGCCTCCTGGAGTCGCCGGGACTCACCAGCGGCAGCGACACC CCGCAACAGGACAATGATCAGCTGAACTCAGAGGAAAAGAAGAAGAGAAAGCAGCGGAGA AACAGGACAACCTTCAACAGCAGTCAGCTGCAGGCTTTGGAGCGTGTCTTTGAGAGGACA CACTACCCAGATGCTTTTGTGCGAGAAGACCTTGCCCGCCGGGTGAATCTCACCGAGGCC AGAGTGCAGGTGTGGTTTCAGAACCGAAGAGCCAAATTTCGCAGGAACGAGAGAGCCATG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 373-490, - strand, RNAz p=0.983729 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 373-490, - strand, RNAz p=0.983729 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 12-737, gnl|bosTau2|chr16 (26530622-26531361) | |
| 12-737, gnl|Hg17|chr1 (167364527-167365262) | |
| 12-737, gnl|Mm7|chr1 (163274113-163273396) | |
| 757-912, gnl|bosTau2|chr11 (80297694-80297849) | |
| 757-912, gnl|canFam2|chr9 (57440050-57439893) | |
| 757-912, gnl|danRer3|chr2 (14978695-14978532) | |
| 757-912, gnl|dasNov1|scaffold_183902 (3378-3529) | |
| 757-912, gnl|echTel1|scaffold_312054 (72897-73053) | |
| 757-912, gnl|fr1|chrUn (73774708-73774551) | |
| 757-912, gnl|galGal2|chr17 (5206297-5206140) | |
| 757-912, gnl|hg17|chr9 (129561100-129561257) | |
| 757-912, gnl|Hg17|chr9 (129561099-129561254) | |
| 757-912, gnl|loxAfr1|scaffold_143515 (142-299) | |
| 757-912, gnl|mm7|chr2 (30885751-30885908) | |
| 757-912, gnl|Mm7|chr2 (30885750-30885905) | |
| 757-912, gnl|monDom2|scaffold_51 (4730971-4731128) | |
| 757-912, gnl|oryCun1|scaffold_87165 (698-852) | |
| 757-912, gnl|panTro1|chr11 (114424989-114425146) | |
| 757-912, gnl|rheMac2|chr15 (9120278-9120121) | |
| 757-912, gnl|rn3|chr3 (9828695-9828852) | |
| 757-912, gnl|tetNig1|chrUn_random (117802497-117802654) | |
| 757-912, gnl|xenTro1|scaffold_810 (499309-499463) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 12-737, gnl|bosTau2|chr16 (26530622-26531361) | |
| 12-737, gnl|Hg17|chr1 (167364527-167365262) | |
| 12-737, gnl|Mm7|chr1 (163274113-163273396) | |
| 757-912, gnl|bosTau2|chr11 (80297694-80297849) | |
| 757-912, gnl|canFam2|chr9 (57440050-57439893) | |
| 757-912, gnl|danRer3|chr2 (14978695-14978532) | |
| 757-912, gnl|dasNov1|scaffold_183902 (3378-3529) | |
| 757-912, gnl|echTel1|scaffold_312054 (72897-73053) | |
| 757-912, gnl|fr1|chrUn (73774708-73774551) | |
| 757-912, gnl|galGal2|chr17 (5206297-5206140) | |
| 757-912, gnl|hg17|chr9 (129561100-129561257) | |
| 757-912, gnl|Hg17|chr9 (129561099-129561254) | |
| 757-912, gnl|loxAfr1|scaffold_143515 (142-299) | |
| 757-912, gnl|mm7|chr2 (30885751-30885908) | |
| 757-912, gnl|Mm7|chr2 (30885750-30885905) | |
| 757-912, gnl|monDom2|scaffold_51 (4730971-4731128) | |
| 757-912, gnl|oryCun1|scaffold_87165 (698-852) | |
| 757-912, gnl|panTro1|chr11 (114424989-114425146) | |
| 757-912, gnl|rheMac2|chr15 (9120278-9120121) | |
| 757-912, gnl|rn3|chr3 (9828695-9828852) | |
| 757-912, gnl|tetNig1|chrUn_random (117802497-117802654) | |
| 757-912, gnl|xenTro1|scaffold_810 (499309-499463) |