Ss1.1-Mixc-0025d19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGCAAGCGCTCTGGGCCCTAGCCCCTGCCCCAGCTATGGCTCCTGGGGCTCCCTCATCC AGCCCCAGTCCTGTCCTGGCTGTACTACTCTTCTCCTCTTTGGTGCTCTCCCCCGCCCAG GCCATTGTGGTTTACACGGACAGGGAGGTTCACGGTGCTGTGGGCTCCCGGGTGACCCTG CACTGCTCCTTCTGGTCCAGTGAGTGGGTCTCGGATGACATCTCCTTTACTTGGCGCTAC CAGCCCGAAGGGGGCCGCGATGCCATCTCGATCTTCCACTATGCCAAGGGACAGCCCTAC ATCGATGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCAATGGAAA GATGGCTCCATTGTCATACACAACCTGGACTATAGTGACAACGGCACTTTCACCTGTGAC GTCAAAAACCCACCAGACATAGTGGGCAAGACCTCTCAGGTCACGCTCTATGTCTTTGAA AAAGTGCCTACTAGGTACGGGGTGGTGCTGGGAGCCGTGATCGGGGGTGTCTTGGGGGTA GTGCTATTGGGGCTGCTGCTTTTCTACCTGATTCGATACTGCTGGCTACGCANGCAGGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGCAAGCGCTCTGGGCCCTAGCCCCTGCCCCAGCTATGGCTCCTGGGGCTCCCTCATCC AGCCCCAGTCCTGTCCTGGCTGTACTACTCTTCTCCTCTTTGGTGCTCTCCCCCGCCCAG GCCATTGTGGTTTACACGGACAGGGAGGTTCACGGTGCTGTGGGCTCCCGGGTGACCCTG CACTGCTCCTTCTGGTCCAGTGAGTGGGTCTCGGATGACATCTCCTTTACTTGGCGCTAC CAGCCCGAAGGGGGCCGCGATGCCATCTCGATCTTCCACTATGCCAAGGGACAGCCCTAC ATCGATGAGGTGGGGACCTTCAAAGAGCGCATCCAGTGGGTAGGGGACCCTCAATGGAAA GATGGCTCCATTGTCATACACAACCTGGACTATAGTGACAACGGCACTTTCACCTGTGAC GTCAAAAACCCACCAGACATAGTGGGCAAGACCTCTCAGGTCACGCTCTATGTCTTTGAA AAAGTGCCTACTAGGTACGGGGTGGTGCTGGGAGCCGTGATCGGGGGTGTCTTGGGGGTA GTGCTATTGGGGCTGCTGCTTTTCTACCTGATTCGATACTGCTGGCTACGCANGCAGGCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 2-103, - strand, RNAz p=0.990521 | |
| 367-484, - strand, RNAz p=0.692337 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 2-103, - strand, RNAz p=0.990521 | |
| 367-484, - strand, RNAz p=0.692337 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 2-103, gnl|bosTau2|chr3 (19406894-19406994) | |
| 2-103, gnl|canFam2|chr38 (24205126-24204975) | |
| 2-103, gnl|echTel1|scaffold_320165 (37566-37723) | |
| 2-103, gnl|hg17|chr1 (158092682-158092834) | |
| 2-103, gnl|Hg17|chr1 (158092803-158092702) | |
| 2-103, gnl|loxAfr1|scaffold_22919 (13777-13628) | |
| 2-103, gnl|mm7|chr1 (171125761-171125611) | |
| 2-103, gnl|Mm7|chr1 (171125640-171125740) | |
| 2-103, gnl|monDom2|scaffold_0 (28472278-28472110) | |
| 2-103, gnl|oryCun1|scaffold_122230 (5034-5186) | |
| 2-103, gnl|panTro1|chr1 (140159416-140159568) | |
| 2-103, gnl|rheMac2|chr1 (139924029-139924175) | |
| 2-103, gnl|rn3|chr13 (87229474-87229324) | |
| 270-484, gnl|bosTau2|chr3 (19409612-19409826) | |
| 270-484, gnl|canFam2|chr38 (24208141-24207922) | |
| 270-484, gnl|danRer3|chr2 (39120727-39120510) | |
| 270-484, gnl|dasNov1|scaffold_76638 (221-440) | |
| 270-484, gnl|echTel1|scaffold_320165 (34381-34600) | |
| 270-484, gnl|hg17|chr1 (158089568-158089787) | |
| 270-484, gnl|Hg17|chr1 (158089785-158089571) | |
| 270-484, gnl|mm7|chr1 (171129063-171128844) | |
| 270-484, gnl|Mm7|chr1 (171128844-171129058) | |
| 270-484, gnl|monDom2|scaffold_0 (28475301-28475082) | |
| 270-484, gnl|oryCun1|scaffold_122230 (2180-2399) | |
| 270-484, gnl|panTro1|chr1 (140156304-140156523) | |
| 270-484, gnl|rheMac2|chr1 (139920947-139921166) | |
| 270-484, gnl|rn3|chr13 (87232889-87232670) | |
| 270-484, gnl|tetNig1|chrUn_random (145528057-145528274) | |
| 270-484, gnl|xenTro1|scaffold_837 (143348-143564) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-103, gnl|bosTau2|chr3 (19406894-19406994) | |
| 2-103, gnl|canFam2|chr38 (24205126-24204975) | |
| 2-103, gnl|echTel1|scaffold_320165 (37566-37723) | |
| 2-103, gnl|hg17|chr1 (158092682-158092834) | |
| 2-103, gnl|Hg17|chr1 (158092803-158092702) | |
| 2-103, gnl|loxAfr1|scaffold_22919 (13777-13628) | |
| 2-103, gnl|mm7|chr1 (171125761-171125611) | |
| 2-103, gnl|Mm7|chr1 (171125640-171125740) | |
| 2-103, gnl|monDom2|scaffold_0 (28472278-28472110) | |
| 2-103, gnl|oryCun1|scaffold_122230 (5034-5186) | |
| 2-103, gnl|panTro1|chr1 (140159416-140159568) | |
| 2-103, gnl|rheMac2|chr1 (139924029-139924175) | |
| 2-103, gnl|rn3|chr13 (87229474-87229324) | |
| 270-484, gnl|bosTau2|chr3 (19409612-19409826) | |
| 270-484, gnl|canFam2|chr38 (24208141-24207922) | |
| 270-484, gnl|danRer3|chr2 (39120727-39120510) | |
| 270-484, gnl|dasNov1|scaffold_76638 (221-440) | |
| 270-484, gnl|echTel1|scaffold_320165 (34381-34600) | |
| 270-484, gnl|hg17|chr1 (158089568-158089787) | |
| 270-484, gnl|Hg17|chr1 (158089785-158089571) | |
| 270-484, gnl|mm7|chr1 (171129063-171128844) | |
| 270-484, gnl|Mm7|chr1 (171128844-171129058) | |
| 270-484, gnl|monDom2|scaffold_0 (28475301-28475082) | |
| 270-484, gnl|oryCun1|scaffold_122230 (2180-2399) | |
| 270-484, gnl|panTro1|chr1 (140156304-140156523) | |
| 270-484, gnl|rheMac2|chr1 (139920947-139921166) | |
| 270-484, gnl|rn3|chr13 (87232889-87232670) | |
| 270-484, gnl|tetNig1|chrUn_random (145528057-145528274) | |
| 270-484, gnl|xenTro1|scaffold_837 (143348-143564) |