Ss1.1-Mixc-0026p04.5
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GCTGAACAAGAAATTAGAAGGAGGGCAGCAGGTCGGGATGCATTCCAAAGGAACTCAGAC
AGCAAAGGAAGAGATGGAAATGGATCCAAAGCCTGACTTAGATTCAGATTCCTGGTGCCT
TCTGGGAACAGACTCCTGTCGACCCAGCCTCTAGTCTCCTGAGCCTGTATAGCCTCCAGG
AACCTTGGATCCAGAGACCTTCACAGCACACTTACTGAATGCAGAGAGCGCTTTCCTGGC
TTTGTTCACTTGCAGACAAGGAGCGCAAGGCGGAGGCTCTGAAGCACTTTCCATGTACAC
TTGGAGAGTAGCGTTGCCTATTAGATAGGATCTAGGAGTGGTTTTGTGTTGGAAAATGGA
AGGGCCCCATGGCCCTGGCTTGGTCCTCAGTGACTGCCATAGCAACAGCAGCTCTGTACC
ACATCTGGTGATTTCCACCTTTGAAGAGGAGACACAATGCTCACCTTAATTTTGCTGGTA
GCAGCTTATATCTCATTTATCATTTTCACCATTAATTGGAAGCTGCCTTGGAAATTCAGC
ACGAGTCATTATTTGCCTAGAAATAATCTTTGCTTCTTTCCACCTTTTCTTGCTAACAAT
CATTTTTGCTGCTACAACTTTATTTCCCCCCAAACGTCTAAATGTTTGCTTAACTGCAGA
GGGAAAGAAAGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCTGAACAAGAAATTAGAAGGAGGGCAGCAGGTCGGGATGCATTCCAAAGGAACTCAGAC
AGCAAAGGAAGAGATGGAAATGGATCCAAAGCCTGACTTAGATTCAGATTCCTGGTGCCT
TCTGGGAACAGACTCCTGTCGACCCAGCCTCTAGTCTCCTGAGCCTGTATAGCCTCCAGG
AACCTTGGATCCAGAGACCTTCACAGCACACTTACTGAATGCAGAGAGCGCTTTCCTGGC
TTTGTTCACTTGCAGACAAGGAGCGCAAGGCGGAGGCTCTGAAGCACTTTCCATGTACAC
TTGGAGAGTAGCGTTGCCTATTAGATAGGATCTAGGAGTGGTTTTGTGTTGGAAAATGGA
AGGGCCCCATGGCCCTGGCTTGGTCCTCAGTGACTGCCATAGCAACAGCAGCTCTGTACC
ACATCTGGTGATTTCCACCTTTGAAGAGGAGACACAATGCTCACCTTAATTTTGCTGGTA
GCAGCTTATATCTCATTTATCATTTTCACCATTAATTGGAAGCTGCCTTGGAAATTCAGC
ACGAGTCATTATTTGCCTAGAAATAATCTTTGCTTCTTTCCACCTTTTCTTGCTAACAAT
CATTTTTGCTGCTACAACTTTATTTCCCCCCAAACGTCTAAATGTTTGCTTAACTGCAGA
GGGAAAGAAAGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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108-189, - strand, RNAmicro p=0.921572 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
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108-189, - strand, RNAmicro p=0.921572 |
Human gene identifier and UTR site,
human gene reading direction
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29-550, gnl|bosTau2|chr10 (56694807-56694292) |
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29-550, gnl|canFam2|chr8 (51220983-51221535) |
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29-550, gnl|dasNov1|scaffold_2022 (100134-100696) |
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29-550, gnl|echTel1|scaffold_317142 (78359-78910) |
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29-550, gnl|galGal2|chr5 (35013568-35014073) |
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29-550, gnl|hg17|chr14 (74620610-74621168) |
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29-550, gnl|Hg17|chr14 (74621145-74620620) |
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29-550, gnl|loxAfr1|scaffold_74015 (1228-671) |
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29-550, gnl|mm7|chr12 (83301230-83301788) |
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29-550, gnl|Mm7|chr12 (83301767-83301240) |
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29-550, gnl|monDom2|scaffold_8 (59401724-59401159) |
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29-550, gnl|oryCun1|scaffold_181133 (46440-46993) |
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29-550, gnl|panTro1|chr15 (74648487-74649048) |
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29-550, gnl|rheMac2|chr7 (138196246-138196802) |
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29-550, gnl|rn3|chr6 (109351230-109351789) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
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29-550, gnl|bosTau2|chr10 (56694807-56694292) |
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29-550, gnl|canFam2|chr8 (51220983-51221535) |
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29-550, gnl|dasNov1|scaffold_2022 (100134-100696) |
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29-550, gnl|echTel1|scaffold_317142 (78359-78910) |
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29-550, gnl|galGal2|chr5 (35013568-35014073) |
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29-550, gnl|hg17|chr14 (74620610-74621168) |
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29-550, gnl|Hg17|chr14 (74621145-74620620) |
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29-550, gnl|loxAfr1|scaffold_74015 (1228-671) |
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29-550, gnl|mm7|chr12 (83301230-83301788) |
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29-550, gnl|Mm7|chr12 (83301767-83301240) |
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29-550, gnl|monDom2|scaffold_8 (59401724-59401159) |
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29-550, gnl|oryCun1|scaffold_181133 (46440-46993) |
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29-550, gnl|panTro1|chr15 (74648487-74649048) |
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29-550, gnl|rheMac2|chr7 (138196246-138196802) |
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29-550, gnl|rn3|chr6 (109351230-109351789) |
