Non-Coding RNA Search

Ss1.1-Mixc-0027k23.5

Sequence:


               
               GGTGCAGGAGAAGGGCTGGGCTGTGAAGGACTTCGAGCTGTGAAAGCCTGTGTACAACTA
GGCATGTGAAACGAATGTCTTTGTGTGTTGGCCTGAAAGATTATGGGAAGAAGAGACATG
GAACCTCGTGATGAAAAAGACTGTATGATTGTGGCTGTGTGAGACTGTGGGAAAGGTCGT
GTGGGTGTTAAGACTGTTTTGTTTGCCGAGCTGAGAATATCCGTGACCCTGAGAAGACAG
TGGGATGTTGTGTGCTACGCGGCTGTGTAGGTTTGGCCTGTAGGCTTGGATGGGCTCACC
TCAGTGACTGTTGGGCCCAGGGGCTGCTTCTCTCGGATCAGTGGCCTCTCTCTTAGGAAA
TGACTCTGAGGGAAGGCTGGGGAGCACTGAGCCGCGCTGGGGAAAGGCCTAGGCTTTCTA
GGGTAAGGTACCCCAAGGTTGGCGGTGACCGAGTGTGTTCTCCGAATGGGCCGCCAGGTG
GCGCCACCTCCACAAATCCAAGCGTGCCTCCTCCAACCGGCTGCGGGTGGGGCAGACACC
CACCAAGCCTTGGCCCCCGACTTGTGCTGGGGCGCAGGGCCCCGAATCGGGGGCAACTGA
CCCTCCGCCGCCCCCTCTGGACTCCGAAGCTGGAGAGTGTGTCTGGGGGAAGAGGCATCG
ACGAGACGAGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGCAGGAGAAGGGCTGGGCTGTGAAGGACTTCGAGCTGTGAAAGCCTGTGTACAACTA
GGCATGTGAAACGAATGTCTTTGTGTGTTGGCCTGAAAGATTATGGGAAGAAGAGACATG
GAACCTCGTGATGAAAAAGACTGTATGATTGTGGCTGTGTGAGACTGTGGGAAAGGTCGT
GTGGGTGTTAAGACTGTTTTGTTTGCCGAGCTGAGAATATCCGTGACCCTGAGAAGACAG
TGGGATGTTGTGTGCTACGCGGCTGTGTAGGTTTGGCCTGTAGGCTTGGATGGGCTCACC
TCAGTGACTGTTGGGCCCAGGGGCTGCTTCTCTCGGATCAGTGGCCTCTCTCTTAGGAAA
TGACTCTGAGGGAAGGCTGGGGAGCACTGAGCCGCGCTGGGGAAAGGCCTAGGCTTTCTA
GGGTAAGGTACCCCAAGGTTGGCGGTGACCGAGTGTGTTCTCCGAATGGGCCGCCAGGTG
GCGCCACCTCCACAAATCCAAGCGTGCCTCCTCCAACCGGCTGCGGGTGGGGCAGACACC
CACCAAGCCTTGGCCCCCGACTTGTGCTGGGGCGCAGGGCCCCGAATCGGGGGCAACTGA
CCCTCCGCCGCCCCCTCTGGACTCCGAAGCTGGAGAGTGTGTCTGGGGGAAGAGGCATCG
ACGAGACGAGAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               443-559, - strand, RNAz p=0.624564

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               443-559, - strand, RNAz p=0.624564

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               26-670, gnl|bosTau2|chr26 (13402306-13402982)
               

               
               26-670, gnl|Hg17|chr10 (102748550-102749209)
               

               
               26-670, gnl|Mm7|chr19 (44910807-44911452)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-670, gnl|bosTau2|chr26 (13402306-13402982)
               

               
               26-670, gnl|Hg17|chr10 (102748550-102749209)
               

               
               26-670, gnl|Mm7|chr19 (44910807-44911452)

	26-670, gnl\|bosTau2\|chr26 (13402306-13402982)
	26-670, gnl\|Hg17\|chr10 (102748550-102749209)
	26-670, gnl\|Mm7\|chr19 (44910807-44911452)