Non-Coding RNA Search

Ss1.1-Mixc-0028f09.3

Sequence:


               
               GGCCGCGCCGCGGGGCCGCCGGCGACGCTTGTGGAGAGCGGATGCGCGCGGGCGACCGCC
CCTGAAGCCCGGCCGAGTCTAGGAGGGACGGATCGGAGCCCAGAGGGGCCCGACTGGGAG
CATGGACCGAGACCCGCGGGCGGCGTCGGGCCCTGCCCTGCGACGGTGGCTGCTGCTGGG
GACCGTGATGGTGGGGCTCCTGGCGCAGAGCGTCCTGGCGGGGGTGAAGAAGTTAGACGT
GCCCTGTGGAGGCAGAGACTGCAGCGGGGGCTGCCAGTGCTACCCCGAGAAAGGAGGCCG
GGGCCAGCCAGGGCCAGTGGGCCCCCAAGGATACACCGGGCCCCCCGGGTTACAAGGATT
CCCAGGACTGCAGGGCCGCAAAGGTGACAAGGGCGAGAGGGGGGCTCCCGGGATCACAGG
ACCGAAAGGAGACGTGGGAGCAAGAGGCGTCTCTGGTTCCCGGGGGCCGATGGAATTCCC
AACAAAAAACCCTTGTGGGACCGCACGTGCGTGTCCTCCCCCCGCAGTCCGGTGAACCGT
GGGACACATCGTTTCCTGCGTAAACGTGGTTTTGGACTTGGCTTCAGCGTTGAGGCTGCT
TTGCTAAAACTGGACAGGGTTTGGTCATAAAAAGCTGCAGAGCTGCCCAGACACGCTGTC
AAGAGCCGGTCTTAACATTTCTTTTGAATTCCAAAACCACCTGAATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCGCGCCGCGGGGCCGCCGGCGACGCTTGTGGAGAGCGGATGCGCGCGGGCGACCGCC
CCTGAAGCCCGGCCGAGTCTAGGAGGGACGGATCGGAGCCCAGAGGGGCCCGACTGGGAG
CATGGACCGAGACCCGCGGGCGGCGTCGGGCCCTGCCCTGCGACGGTGGCTGCTGCTGGG
GACCGTGATGGTGGGGCTCCTGGCGCAGAGCGTCCTGGCGGGGGTGAAGAAGTTAGACGT
GCCCTGTGGAGGCAGAGACTGCAGCGGGGGCTGCCAGTGCTACCCCGAGAAAGGAGGCCG
GGGCCAGCCAGGGCCAGTGGGCCCCCAAGGATACACCGGGCCCCCCGGGTTACAAGGATT
CCCAGGACTGCAGGGCCGCAAAGGTGACAAGGGCGAGAGGGGGGCTCCCGGGATCACAGG
ACCGAAAGGAGACGTGGGAGCAAGAGGCGTCTCTGGTTCCCGGGGGCCGATGGAATTCCC
AACAAAAAACCCTTGTGGGACCGCACGTGCGTGTCCTCCCCCCGCAGTCCGGTGAACCGT
GGGACACATCGTTTCCTGCGTAAACGTGGTTTTGGACTTGGCTTCAGCGTTGAGGCTGCT
TTGCTAAAACTGGACAGGGTTTGGTCATAAAAAGCTGCAGAGCTGCCCAGACACGCTGTC
AAGAGCCGGTCTTAACATTTCTTTTGAATTCCAAAACCACCTGAATAT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|535669|gb|AAA51626.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|535669|gb|AAA51626.1|

Aligned organism(s): 15 entry(ies)

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Aligned organism(s): 15 entry(ies)

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               301-437, gnl|bosTau2|chr12 (46282157-46282021)
               

               
               301-437, gnl|canFam2|chr22 (61705400-61705540)
               

               
               301-437, gnl|echTel1|scaffold_293064 (9577-9696)
               

               
               301-437, gnl|fr1|chrUn (250126665-250126523)
               

               
               301-437, gnl|galGal2|chr1 (132000264-132000404)
               

               
               301-437, gnl|hg17|chr13 (109875074-109875214)
               

               
               301-437, gnl|Hg17|chr13 (109875081-109875217)
               

               
               301-437, gnl|loxAfr1|scaffold_991 (121948-121808)
               

               
               301-437, gnl|mm7|chr8 (11366665-11366805)
               

               
               301-437, gnl|Mm7|chr8 (11366672-11366808)
               

               
               301-437, gnl|monDom2|scaffold_11 (36771127-36770987)
               

               
               301-437, gnl|oryCun1|scaffold_139490 (3846-3706)
               

               
               301-437, gnl|panTro1|chr14 (93315787-93315927)
               

               
               301-437, gnl|rn3|chr16 (82937237-82937097)
               

               
               301-437, gnl|tetNig1|chr2 (9443552-9443408)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               301-437, gnl|bosTau2|chr12 (46282157-46282021)
               

               
               301-437, gnl|canFam2|chr22 (61705400-61705540)
               

               
               301-437, gnl|echTel1|scaffold_293064 (9577-9696)
               

               
               301-437, gnl|fr1|chrUn (250126665-250126523)
               

               
               301-437, gnl|galGal2|chr1 (132000264-132000404)
               

               
               301-437, gnl|hg17|chr13 (109875074-109875214)
               

               
               301-437, gnl|Hg17|chr13 (109875081-109875217)
               

               
               301-437, gnl|loxAfr1|scaffold_991 (121948-121808)
               

               
               301-437, gnl|mm7|chr8 (11366665-11366805)
               

               
               301-437, gnl|Mm7|chr8 (11366672-11366808)
               

               
               301-437, gnl|monDom2|scaffold_11 (36771127-36770987)
               

               
               301-437, gnl|oryCun1|scaffold_139490 (3846-3706)
               

               
               301-437, gnl|panTro1|chr14 (93315787-93315927)
               

               
               301-437, gnl|rn3|chr16 (82937237-82937097)
               

               
               301-437, gnl|tetNig1|chr2 (9443552-9443408)

	301-437, gnl\|bosTau2\|chr12 (46282157-46282021)
	301-437, gnl\|canFam2\|chr22 (61705400-61705540)
	301-437, gnl\|echTel1\|scaffold_293064 (9577-9696)
	301-437, gnl\|fr1\|chrUn (250126665-250126523)
	301-437, gnl\|galGal2\|chr1 (132000264-132000404)
	301-437, gnl\|hg17\|chr13 (109875074-109875214)
	301-437, gnl\|Hg17\|chr13 (109875081-109875217)
	301-437, gnl\|loxAfr1\|scaffold_991 (121948-121808)
	301-437, gnl\|mm7\|chr8 (11366665-11366805)
	301-437, gnl\|Mm7\|chr8 (11366672-11366808)
	301-437, gnl\|monDom2\|scaffold_11 (36771127-36770987)
	301-437, gnl\|oryCun1\|scaffold_139490 (3846-3706)
	301-437, gnl\|panTro1\|chr14 (93315787-93315927)
	301-437, gnl\|rn3\|chr16 (82937237-82937097)
	301-437, gnl\|tetNig1\|chr2 (9443552-9443408)