Ss1.1-Mixc-0028i18.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGGCAGTGCTCAAGGTGCGGCCGGAACGGAGCCGGCGTGAGCGCATCCTTACCCTCGAGT CCATGAACCCTCAGGTGAAGGCGGTGGAGTATGCGGTGCGGGGACCCATCGTGCTCAAGG CTGGCGAGATCGAGCTCGAGCTGCAGCGGGGTATCAAGAAACCATTCACTGAGGTCATCC GTGCCAACATTGGGGATGCCCACGCCATGGGCCAGCAGCCAATCACCTTCCTCCGACAGG TGATGGCACTCTGTACCTACCCAAACCTGCTGGATAGCCCCAGCTTCCCAGAAGATGCTA AGAAAAGAGCCCGGCGGATCCTACAGGCTTGCGGCGGGAACAGTCTGGGCTCCTACAGCG CTAGCCAGGGCGTCAACTGCATCCGTGAAGATGTGGCTGCCTACATCACCAGGAGGGATG GCGGCGTGCCTGCAGACCCAGACAACATTTACCTGACCACCGGCGCTAGTGACGGCATTT CTACGATCCTGAAGATCCTGGTCTCCGGGGGTGGCAAGTCACGGACGGGCGTGATGATCC CCATCCCGCAGTACCCCCTCTACTCTGCCGTCATCTCCGAACTCGACGCCATCCAGGTGA ACTATTACCTGGATGAGGACAACTGCTGGGCCCTGAATGTGAATGAGCTCCGGCGGGCCG TACGGCAGGCCAAAGAGCACTGTAACCCCAAGGTGCTGTGCATCATCAACCCCGGGAACC CCACAGGTCAGGTGCAGAGCAGAAAGTGCATCGAAGACGTGATTCATTTTGCCTGGGAGG AGAAGCTCTTTCTCCTGGCTGATGAGGTGTACCAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGGCAGTGCTCAAGGTGCGGCCGGAACGGAGCCGGCGTGAGCGCATCCTTACCCTCGAGT CCATGAACCCTCAGGTGAAGGCGGTGGAGTATGCGGTGCGGGGACCCATCGTGCTCAAGG CTGGCGAGATCGAGCTCGAGCTGCAGCGGGGTATCAAGAAACCATTCACTGAGGTCATCC GTGCCAACATTGGGGATGCCCACGCCATGGGCCAGCAGCCAATCACCTTCCTCCGACAGG TGATGGCACTCTGTACCTACCCAAACCTGCTGGATAGCCCCAGCTTCCCAGAAGATGCTA AGAAAAGAGCCCGGCGGATCCTACAGGCTTGCGGCGGGAACAGTCTGGGCTCCTACAGCG CTAGCCAGGGCGTCAACTGCATCCGTGAAGATGTGGCTGCCTACATCACCAGGAGGGATG GCGGCGTGCCTGCAGACCCAGACAACATTTACCTGACCACCGGCGCTAGTGACGGCATTT CTACGATCCTGAAGATCCTGGTCTCCGGGGGTGGCAAGTCACGGACGGGCGTGATGATCC CCATCCCGCAGTACCCCCTCTACTCTGCCGTCATCTCCGAACTCGACGCCATCCAGGTGA ACTATTACCTGGATGAGGACAACTGCTGGGCCCTGAATGTGAATGAGCTCCGGCGGGCCG TACGGCAGGCCAAAGAGCACTGTAACCCCAAGGTGCTGTGCATCATCAACCCCGGGAACC CCACAGGTCAGGTGCAGAGCAGAAAGTGCATCGAAGACGTGATTCATTTTGCCTGGGAGG AGAAGCTCTTTCTCCTGGCTGATGAGGTGTACCAGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 542-661, - strand, RNAz p=0.955595 | |
| 562-681, + strand, RNAz p=0.555062 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 542-661, - strand, RNAz p=0.955595 | |
| 562-681, + strand, RNAz p=0.555062 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-150, gnl|bosTau2|chr18 (15936309-15936160) | |
| 1-150, gnl|Hg17|chr16 (45476223-45476372) | |
| 1-150, gnl|Mm7|chr8 (84083732-84083881) | |
| 348-482, gnl|bosTau2|chr18 (15665893-15666027) | |
| 348-482, gnl|Hg17|chr16 (45498254-45498388) | |
| 348-482, gnl|Mm7|chr8 (84099889-84100020) | |
| 483-728, gnl|bosTau2|chr14 (3259462-3259217) | |
| 483-728, gnl|canFam2|chr13 (40955707-40955872) | |
| 483-728, gnl|danRer3|chr7 (35553799-35553636) | |
| 483-728, gnl|echTel1|scaffold_161297 (2384-2234) | |
| 483-728, gnl|fr1|chrUn (283519864-283520027) | |
| 483-728, gnl|hg17|chr8 (145701417-145701589) | |
| 483-728, gnl|Hg17|chr8 (145701437-145701682) | |
| 483-728, gnl|loxAfr1|scaffold_46440 (584-749) | |
| 483-728, gnl|mm7|chr15 (76780379-76780544) | |
| 483-728, gnl|Mm7|chr15 (76780392-76780637) | |
| 483-728, gnl|monDom2|scaffold_79 (3571578-3571729) | |
| 483-728, gnl|oryCun1|scaffold_190962 (38524-38361) | |
| 483-728, gnl|panTro1|chr7 (148957594-148957759) | |
| 483-728, gnl|rheMac2|chr8 (147170460-147170625) | |
| 483-728, gnl|rn3|chr7 (114781363-114781528) | |
| 483-728, gnl|tetNig1|chr6 (1277894-1277731) | |
| 483-728, gnl|xenTro1|scaffold_1265 (167260-167097) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-150, gnl|bosTau2|chr18 (15936309-15936160) | |
| 1-150, gnl|Hg17|chr16 (45476223-45476372) | |
| 1-150, gnl|Mm7|chr8 (84083732-84083881) | |
| 348-482, gnl|bosTau2|chr18 (15665893-15666027) | |
| 348-482, gnl|Hg17|chr16 (45498254-45498388) | |
| 348-482, gnl|Mm7|chr8 (84099889-84100020) | |
| 483-728, gnl|bosTau2|chr14 (3259462-3259217) | |
| 483-728, gnl|canFam2|chr13 (40955707-40955872) | |
| 483-728, gnl|danRer3|chr7 (35553799-35553636) | |
| 483-728, gnl|echTel1|scaffold_161297 (2384-2234) | |
| 483-728, gnl|fr1|chrUn (283519864-283520027) | |
| 483-728, gnl|hg17|chr8 (145701417-145701589) | |
| 483-728, gnl|Hg17|chr8 (145701437-145701682) | |
| 483-728, gnl|loxAfr1|scaffold_46440 (584-749) | |
| 483-728, gnl|mm7|chr15 (76780379-76780544) | |
| 483-728, gnl|Mm7|chr15 (76780392-76780637) | |
| 483-728, gnl|monDom2|scaffold_79 (3571578-3571729) | |
| 483-728, gnl|oryCun1|scaffold_190962 (38524-38361) | |
| 483-728, gnl|panTro1|chr7 (148957594-148957759) | |
| 483-728, gnl|rheMac2|chr8 (147170460-147170625) | |
| 483-728, gnl|rn3|chr7 (114781363-114781528) | |
| 483-728, gnl|tetNig1|chr6 (1277894-1277731) | |
| 483-728, gnl|xenTro1|scaffold_1265 (167260-167097) |