Ss1.1-Mixc-0029a17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATCTGAGCCCCAGATTACCCCGAGTTTCCGTCACAGGCTGCGAGGAAAGGCTTCTTCGCT GGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGAC ACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCCG TGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTTG CGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTCA CCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTCA CCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAGG TGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATG GCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTTG CATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGGG TCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGGG TGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTCTGGG AGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCTGG TGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATCTGAGCCCCAGATTACCCCGAGTTTCCGTCACAGGCTGCGAGGAAAGGCTTCTTCGCT GGGTCCGGGTGCTTGGCGGCGGCGGCTTCATCCCCGCTGGTCCTCCCCGGGCCCGGAGAC ACCCCCGCCCCAGTCATGCTGAGCAGAGTATGGAAGCAGCTGATTACGAAGTGCTATCCG TGCGAGAGCAGCTATTCCACGAGAGGGTCCGCGAGTGCATTATCTCAACGCTTCTGTTTG CGACACTCTACATCCTCTGCCACATCGCCCTGACTCGCTTCAAGAAGCCTGCTGAGTTCA CCACAGTGGATGATGAAGATGCCACAGTCAACAAGATTGCGCTCGAGCTGTGCACCTTCA CCCTGGCAGTCGCTCTGGGTGCTGTCCTGCTCCTGCCCTTTTCCATCATCAGCAATGAGG TGCTGCTCTCACTGCCTCGAAACTACTACATCCAGTGGCTCAACGGCTCCCTCATCCATG GCCTCTGGAACCTGGTATTTCTCTTCTCCAACTTGTCCCTCATCTTCCTCATGCCTTTTG CATACTTCTTCACTGAGTCTGAGGGCTTCGCTGGCTCCAGAAAGGGTGTCCTGGCCCGGG TCTACGAGACGGTGGTGATGTTGATTCTTCTCACTCTGCTGGTGCTGGGCATGGTGTGGG TGGCATCAGCCATTGTGGACAACGACAAGGCCAGCAGGGAGTCCCTCTATGACTTCTGGG AGTACTACCTCCCCTACCTCTACTCCTGCATCTCCTTCCTTGGGGTGCTGCTCCTCCTGG TGTGTACTCCGCTAGGTCTCGCCCGCATGTTCTCCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 341-459, - strand, RNAz p=0.628195 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 341-459, - strand, RNAz p=0.628195 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-221, gnl|bosTau2|chr5 (22353952-22354172) | |
| 1-221, gnl|Hg17|chr12 (47790754-47790534) | |
| 1-221, gnl|Mm7|chr15 (98903332-98903108) | |
| 341-496, gnl|bosTau2|chr5 (22358860-22359015) | |
| 341-496, gnl|canFam2|chr27 (8491313-8491132) | |
| 341-496, gnl|danRer3|chr23 (39819816-39819659) | |
| 341-496, gnl|dasNov1|scaffold_44695 (3817-3996) | |
| 341-496, gnl|echTel1|scaffold_290493 (7613-7434) | |
| 341-496, gnl|fr1|chrUn (40992597-40992780) | |
| 341-496, gnl|hg17|chr12 (47784768-47784947) | |
| 341-496, gnl|Hg17|chr12 (47784935-47784780) | |
| 341-496, gnl|loxAfr1|scaffold_2320 (82860-83039) | |
| 341-496, gnl|mm7|chr15 (98897636-98897807) | |
| 341-496, gnl|Mm7|chr15 (98897795-98897642) | |
| 341-496, gnl|monDom2|scaffold_302 (73714-73888) | |
| 341-496, gnl|oryCun1|scaffold_194536 (14971-15144) | |
| 341-496, gnl|panTro1|chr10 (48960193-48960372) | |
| 341-496, gnl|rheMac2|chr11 (46232748-46232927) | |
| 341-496, gnl|rn3|chr7 (137763389-137763560) | |
| 341-496, gnl|tetNig1|chr9 (3919904-3920077) | |
| 341-496, gnl|xenTro1|scaffold_133 (1751054-1751236) | |
| 583-760, gnl|bosTau2|chr5 (22360174-22360349) | |
| 583-760, gnl|Hg17|chr12 (47783865-47783682) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-221, gnl|bosTau2|chr5 (22353952-22354172) | |
| 1-221, gnl|Hg17|chr12 (47790754-47790534) | |
| 1-221, gnl|Mm7|chr15 (98903332-98903108) | |
| 341-496, gnl|bosTau2|chr5 (22358860-22359015) | |
| 341-496, gnl|canFam2|chr27 (8491313-8491132) | |
| 341-496, gnl|danRer3|chr23 (39819816-39819659) | |
| 341-496, gnl|dasNov1|scaffold_44695 (3817-3996) | |
| 341-496, gnl|echTel1|scaffold_290493 (7613-7434) | |
| 341-496, gnl|fr1|chrUn (40992597-40992780) | |
| 341-496, gnl|hg17|chr12 (47784768-47784947) | |
| 341-496, gnl|Hg17|chr12 (47784935-47784780) | |
| 341-496, gnl|loxAfr1|scaffold_2320 (82860-83039) | |
| 341-496, gnl|mm7|chr15 (98897636-98897807) | |
| 341-496, gnl|Mm7|chr15 (98897795-98897642) | |
| 341-496, gnl|monDom2|scaffold_302 (73714-73888) | |
| 341-496, gnl|oryCun1|scaffold_194536 (14971-15144) | |
| 341-496, gnl|panTro1|chr10 (48960193-48960372) | |
| 341-496, gnl|rheMac2|chr11 (46232748-46232927) | |
| 341-496, gnl|rn3|chr7 (137763389-137763560) | |
| 341-496, gnl|tetNig1|chr9 (3919904-3920077) | |
| 341-496, gnl|xenTro1|scaffold_133 (1751054-1751236) | |
| 583-760, gnl|bosTau2|chr5 (22360174-22360349) | |
| 583-760, gnl|Hg17|chr12 (47783865-47783682) |