Ss1.1-Mixc-0031a05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGTCCCTGGAGGAGATCCTGGCGGAGGGCGTGGAGGAAAGCGATGCGTCGAGCCAGGC CAGCGGCAGCGAGGGGCCCGTGCGGCTGAGCCGGACGCGCACCAAGGCCCTGCAGGAGGC CATGTACTACAGCGCGGAGCATGGCTACGTGGACATCACCATGGAGCTGCGGGCGCTGGG CGTCCCCTGGAAGCTGCACGTCTGGATCGAGTCTCTGAGGACATCCTTCTCCCAGTCCCG GTATTCCGTGGTGCAGAGCCTCCTGCGGGATTTCAGCTCCATCAAGGAGGAGGAATACAA TGAGGAGCTGGTGACCGAGGGCTTGCAGCTCATGTTCGACATCCTCAAGACCAGCAAGAA CGACTCCGTCATCCAGCAGCTGGCCACCATCTTCACGCACTGCTACGGCAGCAGCCCCAT CCCCAGCATCCCCGAGCTCCGGAAGACCCTGCCCGCCAGGCTAGATCCTCACTTTTTGAA CAACAAGGAGATGTCGGATGTGACCTTCCTCGTGGAGGGAAAGCTGTTTTATGCACATAA AGTCCTGCTGGTGACGGCGTCTAACAGGTTCAAGACGCTGATGACCAACAAATCAGAACA AGATGGCGACAGCAGCAAGACCATTGAGATCAGCGACATGAAGTACCACATCTTTCAGAT GATGATGCGGTATCTGTACTACGGGGGCACGGAATCCATGGACATCCCCACCGGTGACAT CCTGGAGCTGCTGTCAGCTGCCAGCTTGTTCCAGCTGGATGCCCTGCAGCGGCACTGCGA GATCCTGTGCTCCCAGACCCTGAGCGTGGAGAGCGCCGTTAGCACCTACAAGTATGCCAA GATCCACAACGCCCCCGAACTGGCCCTGTTCTGCGAAGGCTTCTTCCTCAAGCACATGAA AGCCCTGCTGGAGCAGGACTCCTTCCGGCAGCTCATCTACGGCCGCAGCAGCAAGGTGCA GGGCCTGGGCCCCCTGCAGGACCTGCAGAGCACCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGTCCCTGGAGGAGATCCTGGCGGAGGGCGTGGAGGAAAGCGATGCGTCGAGCCAGGC CAGCGGCAGCGAGGGGCCCGTGCGGCTGAGCCGGACGCGCACCAAGGCCCTGCAGGAGGC CATGTACTACAGCGCGGAGCATGGCTACGTGGACATCACCATGGAGCTGCGGGCGCTGGG CGTCCCCTGGAAGCTGCACGTCTGGATCGAGTCTCTGAGGACATCCTTCTCCCAGTCCCG GTATTCCGTGGTGCAGAGCCTCCTGCGGGATTTCAGCTCCATCAAGGAGGAGGAATACAA TGAGGAGCTGGTGACCGAGGGCTTGCAGCTCATGTTCGACATCCTCAAGACCAGCAAGAA CGACTCCGTCATCCAGCAGCTGGCCACCATCTTCACGCACTGCTACGGCAGCAGCCCCAT CCCCAGCATCCCCGAGCTCCGGAAGACCCTGCCCGCCAGGCTAGATCCTCACTTTTTGAA CAACAAGGAGATGTCGGATGTGACCTTCCTCGTGGAGGGAAAGCTGTTTTATGCACATAA AGTCCTGCTGGTGACGGCGTCTAACAGGTTCAAGACGCTGATGACCAACAAATCAGAACA AGATGGCGACAGCAGCAAGACCATTGAGATCAGCGACATGAAGTACCACATCTTTCAGAT GATGATGCGGTATCTGTACTACGGGGGCACGGAATCCATGGACATCCCCACCGGTGACAT CCTGGAGCTGCTGTCAGCTGCCAGCTTGTTCCAGCTGGATGCCCTGCAGCGGCACTGCGA GATCCTGTGCTCCCAGACCCTGAGCGTGGAGAGCGCCGTTAGCACCTACAAGTATGCCAA GATCCACAACGCCCCCGAACTGGCCCTGTTCTGCGAAGGCTTCTTCCTCAAGCACATGAA AGCCCTGCTGGAGCAGGACTCCTTCCGGCAGCTCATCTACGGCCGCAGCAGCAAGGTGCA GGGCCTGGGCCCCCTGCAGGACCTGCAGAGCACCCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 879-996, - strand, RNAz p=0.587052 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 879-996, - strand, RNAz p=0.587052 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 179-358, gnl|bosTau2|chr15 (39101981-39101802) | |
| 179-358, gnl|Hg17|chr11 (34139205-34139026) | |
| 179-358, gnl|Mm7|chr2 (103561462-103561641) | |
| 448-569, gnl|bosTau2|chr15 (39101037-39100916) | |
| 448-569, gnl|canFam2|chr18 (36662887-36662723) | |
| 448-569, gnl|danRer3|chr2 (2991945-2992083) | |
| 448-569, gnl|dasNov1|scaffold_52541 (3421-3591) | |
| 448-569, gnl|echTel1|scaffold_300930 (19617-19783) | |
| 448-569, gnl|fr1|chrUn (6360718-6360828) | |
| 448-569, gnl|galGal2|chrUn (156125086-156124925) | |
| 448-569, gnl|hg17|chr11 (34138025-34138196) | |
| 448-569, gnl|Hg17|chr11 (34138150-34138027) | |
| 448-569, gnl|loxAfr1|scaffold_133426 (308-147) | |
| 448-569, gnl|mm7|chr2 (103562340-103562188) | |
| 448-569, gnl|Mm7|chr2 (103562166-103562336) | |
| 448-569, gnl|monDom2|scaffold_10 (80388443-80388600) | |
| 448-569, gnl|oryCun1|scaffold_198377 (108375-108549) | |
| 448-569, gnl|panTro1|chr9 (34525071-34525242) | |
| 448-569, gnl|rheMac2|chr14 (37660389-37660218) | |
| 448-569, gnl|rn3|chr3 (88901681-88901530) | |
| 448-569, gnl|tetNig1|chr13 (5857650-5857768) | |
| 448-569, gnl|xenTro1|scaffold_76 (25907-26080) | |
| 840-996, gnl|bosTau2|chr15 (39093706-39093550) | |
| 840-996, gnl|Hg17|chr11 (34130709-34130553) | |
| 840-996, gnl|Mm7|chr2 (103567945-103568101) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 179-358, gnl|bosTau2|chr15 (39101981-39101802) | |
| 179-358, gnl|Hg17|chr11 (34139205-34139026) | |
| 179-358, gnl|Mm7|chr2 (103561462-103561641) | |
| 448-569, gnl|bosTau2|chr15 (39101037-39100916) | |
| 448-569, gnl|canFam2|chr18 (36662887-36662723) | |
| 448-569, gnl|danRer3|chr2 (2991945-2992083) | |
| 448-569, gnl|dasNov1|scaffold_52541 (3421-3591) | |
| 448-569, gnl|echTel1|scaffold_300930 (19617-19783) | |
| 448-569, gnl|fr1|chrUn (6360718-6360828) | |
| 448-569, gnl|galGal2|chrUn (156125086-156124925) | |
| 448-569, gnl|hg17|chr11 (34138025-34138196) | |
| 448-569, gnl|Hg17|chr11 (34138150-34138027) | |
| 448-569, gnl|loxAfr1|scaffold_133426 (308-147) | |
| 448-569, gnl|mm7|chr2 (103562340-103562188) | |
| 448-569, gnl|Mm7|chr2 (103562166-103562336) | |
| 448-569, gnl|monDom2|scaffold_10 (80388443-80388600) | |
| 448-569, gnl|oryCun1|scaffold_198377 (108375-108549) | |
| 448-569, gnl|panTro1|chr9 (34525071-34525242) | |
| 448-569, gnl|rheMac2|chr14 (37660389-37660218) | |
| 448-569, gnl|rn3|chr3 (88901681-88901530) | |
| 448-569, gnl|tetNig1|chr13 (5857650-5857768) | |
| 448-569, gnl|xenTro1|scaffold_76 (25907-26080) | |
| 840-996, gnl|bosTau2|chr15 (39093706-39093550) | |
| 840-996, gnl|Hg17|chr11 (34130709-34130553) | |
| 840-996, gnl|Mm7|chr2 (103567945-103568101) |