Ss1.1-Mixc-0031j14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCGCCGCCCGGTGCCCCCAGCTCCGCAGGACCCCGACCGGGCCGGATCGCGGCGGCGCG CCAACGGTCTGCGGCCGATGGCGAGGGGGCGCGGCGCGGGCGGGGGCGCTGCAGCCCGAG TTCGCGACGCGGGAGGCTCGGCCCGCCTCCGCTGCATTGCCCCGGGCCCTGCGCCCCGGC CCTGAGTAGCACCGCCGCAGCGCCCGCCTGCCGCCTATGAATGCTCAGAACATGAGTGGG GGGGCCTCTGACTTCCTTCTCAGCTGCTCATGTTCTTCCCACTCTCTGCCCTGTCCCCCC CAGACTTGCACTTGGCCGCAGAGCTGGGAAAAACGCTGCTGGAGAGGAACAAGGAGCTGG AGGAGTCTCTGCAGCAGATGTATTCCACCAACGAGGAGCAAGTTCAGGAGATTGAGTACC TGACCAAGCAGCTGGATACGCTGAGGCACGTGAATGAGCAGCACGCCAAAGTGTACGAGC AGCTGGACCTGGCAGCCCGAGATCTGGAGCTGACCAACCAGAAGCTGGTGCTGGAGAGTA AGGCTGCCCAGCAGAAGATCCATGGGCTGTCAGAGACCATTGAGCGCCTGCAGACTCAGG TCGAGGAGCTGCAGGCCCAGGTGGAGCAGCTTCGGGGCCTGGAGCAGCTGCGAGTGCGGC GGGAGAAGCGGGAACGCAGGCGCACCATCCATACCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCGCCGCCCGGTGCCCCCAGCTCCGCAGGACCCCGACCGGGCCGGATCGCGGCGGCGCG CCAACGGTCTGCGGCCGATGGCGAGGGGGCGCGGCGCGGGCGGGGGCGCTGCAGCCCGAG TTCGCGACGCGGGAGGCTCGGCCCGCCTCCGCTGCATTGCCCCGGGCCCTGCGCCCCGGC CCTGAGTAGCACCGCCGCAGCGCCCGCCTGCCGCCTATGAATGCTCAGAACATGAGTGGG GGGGCCTCTGACTTCCTTCTCAGCTGCTCATGTTCTTCCCACTCTCTGCCCTGTCCCCCC CAGACTTGCACTTGGCCGCAGAGCTGGGAAAAACGCTGCTGGAGAGGAACAAGGAGCTGG AGGAGTCTCTGCAGCAGATGTATTCCACCAACGAGGAGCAAGTTCAGGAGATTGAGTACC TGACCAAGCAGCTGGATACGCTGAGGCACGTGAATGAGCAGCACGCCAAAGTGTACGAGC AGCTGGACCTGGCAGCCCGAGATCTGGAGCTGACCAACCAGAAGCTGGTGCTGGAGAGTA AGGCTGCCCAGCAGAAGATCCATGGGCTGTCAGAGACCATTGAGCGCCTGCAGACTCAGG TCGAGGAGCTGCAGGCCCAGGTGGAGCAGCTTCGGGGCCTGGAGCAGCTGCGAGTGCGGC GGGAGAAGCGGGAACGCAGGCGCACCATCCATACCT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 297-416, + strand, RNAz p=0.89648 | |
| 565-683, + strand, RNAz p=0.53462 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 297-416, + strand, RNAz p=0.89648 | |
| 565-683, + strand, RNAz p=0.53462 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 16-215, gnl|bosTau2|chr19 (50971113-50971311) | |
| 16-215, gnl|Hg17|chr17 (70495531-70495724) | |
| 16-215, gnl|Mm7|chr11 (115491154-115491352) | |
| 220-416, gnl|bosTau2|chr19 (50978535-50978733) | |
| 220-416, gnl|Hg17|chr17 (70507129-70507306) | |
| 220-416, gnl|Mm7|chr11 (115499506-115499668) | |
| 565-696, gnl|bosTau2|chr19 (50980703-50980834) | |
| 565-696, gnl|canFam2|chr9 (8461260-8461084) | |
| 565-696, gnl|danRer3|chr17 (11016223-11016049) | |
| 565-696, gnl|dasNov1|scaffold_12415 (11593-11767) | |
| 565-696, gnl|echTel1|scaffold_215281 (1119-1295) | |
| 565-696, gnl|fr1|chrUn (235477340-235477167) | |
| 565-696, gnl|galGal2|chr3_random (1296331-1296507) | |
| 565-696, gnl|hg17|chr17 (70509748-70509924) | |
| 565-696, gnl|Hg17|chr17 (70509753-70509884) | |
| 565-696, gnl|loxAfr1|scaffold_16318 (39196-39020) | |
| 565-696, gnl|mm7|chr11 (115501698-115501874) | |
| 565-696, gnl|Mm7|chr11 (115501703-115501834) | |
| 565-696, gnl|monDom2|scaffold_18 (32277472-32277648) | |
| 565-696, gnl|oryCun1|scaffold_158902 (15965-15789) | |
| 565-696, gnl|panTro1|chr19 (73857518-73857694) | |
| 565-696, gnl|rheMac2|chr16 (70265171-70265347) | |
| 565-696, gnl|rn3|chr10 (105484701-105484877) | |
| 565-696, gnl|tetNig1|chrUn_random (39532153-39532323) | |
| 565-696, gnl|xenTro1|scaffold_632 (49170-49342) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 16-215, gnl|bosTau2|chr19 (50971113-50971311) | |
| 16-215, gnl|Hg17|chr17 (70495531-70495724) | |
| 16-215, gnl|Mm7|chr11 (115491154-115491352) | |
| 220-416, gnl|bosTau2|chr19 (50978535-50978733) | |
| 220-416, gnl|Hg17|chr17 (70507129-70507306) | |
| 220-416, gnl|Mm7|chr11 (115499506-115499668) | |
| 565-696, gnl|bosTau2|chr19 (50980703-50980834) | |
| 565-696, gnl|canFam2|chr9 (8461260-8461084) | |
| 565-696, gnl|danRer3|chr17 (11016223-11016049) | |
| 565-696, gnl|dasNov1|scaffold_12415 (11593-11767) | |
| 565-696, gnl|echTel1|scaffold_215281 (1119-1295) | |
| 565-696, gnl|fr1|chrUn (235477340-235477167) | |
| 565-696, gnl|galGal2|chr3_random (1296331-1296507) | |
| 565-696, gnl|hg17|chr17 (70509748-70509924) | |
| 565-696, gnl|Hg17|chr17 (70509753-70509884) | |
| 565-696, gnl|loxAfr1|scaffold_16318 (39196-39020) | |
| 565-696, gnl|mm7|chr11 (115501698-115501874) | |
| 565-696, gnl|Mm7|chr11 (115501703-115501834) | |
| 565-696, gnl|monDom2|scaffold_18 (32277472-32277648) | |
| 565-696, gnl|oryCun1|scaffold_158902 (15965-15789) | |
| 565-696, gnl|panTro1|chr19 (73857518-73857694) | |
| 565-696, gnl|rheMac2|chr16 (70265171-70265347) | |
| 565-696, gnl|rn3|chr10 (105484701-105484877) | |
| 565-696, gnl|tetNig1|chrUn_random (39532153-39532323) | |
| 565-696, gnl|xenTro1|scaffold_632 (49170-49342) |