Non-Coding RNA Search

Ss1.1-Mixc-0031k06.5

Sequence:


               
               TTTTTTTTTTAAATGTCTTTACATTAAATGAATCATGCAGTAATTAATTCAAGGTACACC
TTAATCAAATAGGCCATAATGCTGAATAAGAGAACATGCTTGAACTCCAAAAAAGTGATT
GTTCCCATCTGACTAACGTAGGTACTTAAATACAGTACTTAATTGACTAATAAAAAGAGT
TAATAAATGAAGGAGTGCACTTTTGGTGAATGCAAATGAAGACGGATCTAGTTTTCGAAG
ACTCGATTCCAAAGTAAGCTTATTCCCTATTGTCTGAGTTAACGTTCTCGGCATGCGACT
ATAAAAGAAATATGATCAGATTCAAACATGCTAACACTTGGTTCCATTTGTGCTCTCTTG
CAATAAGGAGGCTACGGTTTTACATCCAGTTCTGGAGGCCAAGGGTCAGGGTGCAGGACT
GGTGAGAAAAGACCCATTGGGCACATCTGCAGTTGAAAATCTTAGCAGCACTGCAGAGGA
AACAGTGAATTTCATTCAGTTATCTTTTTCTTAAGAGTTTGAATCCGAAGGGAAGGGGGC
AGAGGGAAAAAAAGATCCCTACAGACCAGGACCAGTATCAGATTTATAAGGTGCTGTGTG
AACCAGTCTTGAGTCAATTTTTTTCACCTTACAATATGCAGTTCAGTTGATCAAAATAAA
AACATCTGTCGTTGCCCATTTCGGCTGGTCTATCATGTTACACCTAATACATTGGATGCA
CTTCGTAAGTGTGCTGTGCAGTTTGCAAAGATTTCATCTTGGAGTCCCCCATGCCAAATG
CTTAATGTCCCTATTTCTAATCCN------------GTCTGTAGTTAA------------
------------CCACCCCAAGGGATTAAAAATGGGGAAGCATATGAATCNTTATTTTAC
CTAGACTAGTTCATGGACTGAGTTATTTTAAACCAGTTTTAGAAAATACACTTTCTTTTC
CCGTTTTTTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTAAATGTCTTTACATTAAATGAATCATGCAGTAATTAATTCAAGGTACACC
TTAATCAAATAGGCCATAATGCTGAATAAGAGAACATGCTTGAACTCCAAAAAAGTGATT
GTTCCCATCTGACTAACGTAGGTACTTAAATACAGTACTTAATTGACTAATAAAAAGAGT
TAATAAATGAAGGAGTGCACTTTTGGTGAATGCAAATGAAGACGGATCTAGTTTTCGAAG
ACTCGATTCCAAAGTAAGCTTATTCCCTATTGTCTGAGTTAACGTTCTCGGCATGCGACT
ATAAAAGAAATATGATCAGATTCAAACATGCTAACACTTGGTTCCATTTGTGCTCTCTTG
CAATAAGGAGGCTACGGTTTTACATCCAGTTCTGGAGGCCAAGGGTCAGGGTGCAGGACT
GGTGAGAAAAGACCCATTGGGCACATCTGCAGTTGAAAATCTTAGCAGCACTGCAGAGGA
AACAGTGAATTTCATTCAGTTATCTTTTTCTTAAGAGTTTGAATCCGAAGGGAAGGGGGC
AGAGGGAAAAAAAGATCCCTACAGACCAGGACCAGTATCAGATTTATAAGGTGCTGTGTG
AACCAGTCTTGAGTCAATTTTTTTCACCTTACAATATGCAGTTCAGTTGATCAAAATAAA
AACATCTGTCGTTGCCCATTTCGGCTGGTCTATCATGTTACACCTAATACATTGGATGCA
CTTCGTAAGTGTGCTGTGCAGTTTGCAAAGATTTCATCTTGGAGTCCCCCATGCCAAATG
CTTAATGTCCCTATTTCTAATCCN------------GTCTGTAGTTAA------------
------------CCACCCCAAGGGATTAAAAATGGGGAAGCATATGAATCNTTATTTTAC
CTAGACTAGTTCATGGACTGAGTTATTTTAAACCAGTTTTAGAAAATACACTTTCTTTTC
CCGTTTTTTTTA

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               2-814, gnl|bosTau2|chr5 (64033910-64033095)
               

               
               2-814, gnl|Hg17|chr12 (4893478-4892663)
               

               
               2-814, gnl|Mm7|chr6 (126663453-126664247)
               


               
               829-934, gnl|bosTau2|chr5 (64033049-64032946)
               

               
               829-934, gnl|Hg17|chr12 (4892629-4892516)
               

               
               829-934, gnl|Mm7|chr6 (126664305-126664411)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-814, gnl|bosTau2|chr5 (64033910-64033095)
               

               
               2-814, gnl|Hg17|chr12 (4893478-4892663)
               

               
               2-814, gnl|Mm7|chr6 (126663453-126664247)
               


               
               829-934, gnl|bosTau2|chr5 (64033049-64032946)
               

               
               829-934, gnl|Hg17|chr12 (4892629-4892516)
               

               
               829-934, gnl|Mm7|chr6 (126664305-126664411)

	2-814, gnl\|bosTau2\|chr5 (64033910-64033095)
	2-814, gnl\|Hg17\|chr12 (4893478-4892663)
	2-814, gnl\|Mm7\|chr6 (126663453-126664247)

	829-934, gnl\|bosTau2\|chr5 (64033049-64032946)
	829-934, gnl\|Hg17\|chr12 (4892629-4892516)
	829-934, gnl\|Mm7\|chr6 (126664305-126664411)