Ss1.1-Mixc-0031l04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAGCAGGACTGGAAGCTAGTGGGGATGTCTGACGCCTGCCTGCAGAGGAAGACCTACCC TGAGAGGCGCAGCACGTTGAAAAATGAACAGTCGTCACCGCACCTCATCCAGGCCACCTG GACCAGCTCGATTCTCCATCTGGACCACGACGATGTGAATGATCAGAGTGTCCCCGGTGC CCAGACCTTCCAAACGGAAGAGAAGAAATGTAAAGGCTACATCCCCAGTTACTTAGACAA GGACGAGCTTTGTGTGGTGTGTGGTGACAAGGCCACTGGCTATCACTACCGCTGCATCAC ATGCGAAGGCTGCAAGGGTTTCTTTAGAAGAACCATTCAGAAAAATCTCCATCCATCCTA TGCCTGTAAATATGAAGGAAAATGTGTCATAGACCAAGTCACCAGAAATCAGTGCCAGGA ATGTCGCTTTAAAAAATGCATCTACGTTGGCATGGCAACAGATTTGGTCCTGGACGACAG CAAGCGCCTGGCCAAGAGGAAGCTGATCGAGGAGAACCGGGAGAAGAGGCGGCGGGAGGA GCTGCAGCGATCCATCGGGCACAAGCCAGAGCCCACAGACCAGGAGTGGGAGCTCATCAA GACCGTCACTGAGGCCCATGTGGCCACCAACGCCCAAGGCAGCCACTGGAAGCAGAAGCG GAAGTTCATGCCAGAAGATATTGGACAAGCACCAATAGTAAACGCCCCAGAAGGTGGAAA GGTCGACTTAGAAGCCTTCAGCCATTTTACAAAAATCATCACACCAGCAATTACCAGAGT GGTGGATTTTGCCAAAAAGTTGCCTATGTTTTGTGAGCTGCCATGTGAAGACCAGATCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAGCAGGACTGGAAGCTAGTGGGGATGTCTGACGCCTGCCTGCAGAGGAAGACCTACCC TGAGAGGCGCAGCACGTTGAAAAATGAACAGTCGTCACCGCACCTCATCCAGGCCACCTG GACCAGCTCGATTCTCCATCTGGACCACGACGATGTGAATGATCAGAGTGTCCCCGGTGC CCAGACCTTCCAAACGGAAGAGAAGAAATGTAAAGGCTACATCCCCAGTTACTTAGACAA GGACGAGCTTTGTGTGGTGTGTGGTGACAAGGCCACTGGCTATCACTACCGCTGCATCAC ATGCGAAGGCTGCAAGGGTTTCTTTAGAAGAACCATTCAGAAAAATCTCCATCCATCCTA TGCCTGTAAATATGAAGGAAAATGTGTCATAGACCAAGTCACCAGAAATCAGTGCCAGGA ATGTCGCTTTAAAAAATGCATCTACGTTGGCATGGCAACAGATTTGGTCCTGGACGACAG CAAGCGCCTGGCCAAGAGGAAGCTGATCGAGGAGAACCGGGAGAAGAGGCGGCGGGAGGA GCTGCAGCGATCCATCGGGCACAAGCCAGAGCCCACAGACCAGGAGTGGGAGCTCATCAA GACCGTCACTGAGGCCCATGTGGCCACCAACGCCCAAGGCAGCCACTGGAAGCAGAAGCG GAAGTTCATGCCAGAAGATATTGGACAAGCACCAATAGTAAACGCCCCAGAAGGTGGAAA GGTCGACTTAGAAGCCTTCAGCCATTTTACAAAAATCATCACACCAGCAATTACCAGAGT GGTGGATTTTGCCAAAAAGTTGCCTATGTTTTGTGAGCTGCCATGTGAAGACCAGATCGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 504-670, - strand, RNAz p=0.954137 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 504-670, - strand, RNAz p=0.954137 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 214-317, gnl|bosTau2|chr19 (34519971-34519868) | |
| 214-317, gnl|Hg17|chr17 (35487285-35487388) | |
| 214-317, gnl|Mm7|chr11 (98865960-98866063) | |
| 465-670, gnl|bosTau2|chr19 (34517149-34516944) | |
| 465-670, gnl|canFam2|chr9 (25803782-25803567) | |
| 465-670, gnl|danRer3|chr3 (30727301-30727514) | |
| 465-670, gnl|dasNov1|scaffold_3475 (87521-87722) | |
| 465-670, gnl|echTel1|scaffold_295851 (4248-4033) | |
| 465-670, gnl|fr1|chrUn (197684029-197683814) | |
| 465-670, gnl|galGal2|chrUn (22079060-22079275) | |
| 465-670, gnl|hg17|chr17 (35494387-35494602) | |
| 465-670, gnl|Hg17|chr17 (35494389-35494594) | |
| 465-670, gnl|loxAfr1|scaffold_33074 (8830-8617) | |
| 465-670, gnl|mm7|chr11 (98870758-98870973) | |
| 465-670, gnl|Mm7|chr11 (98870760-98870965) | |
| 465-670, gnl|monDom2|scaffold_18 (49311184-49311400) | |
| 465-670, gnl|oryCun1|scaffold_199304 (45054-45269) | |
| 465-670, gnl|panTro1|chr19 (38733576-38733791) | |
| 465-670, gnl|rheMac2|chr16 (50188535-50188750) | |
| 465-670, gnl|rn3|chr10 (87549223-87549438) | |
| 465-670, gnl|tetNig1|chrUn_random (134821043-134821256) | |
| 465-670, gnl|xenTro1|scaffold_670 (445418-445196) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 214-317, gnl|bosTau2|chr19 (34519971-34519868) | |
| 214-317, gnl|Hg17|chr17 (35487285-35487388) | |
| 214-317, gnl|Mm7|chr11 (98865960-98866063) | |
| 465-670, gnl|bosTau2|chr19 (34517149-34516944) | |
| 465-670, gnl|canFam2|chr9 (25803782-25803567) | |
| 465-670, gnl|danRer3|chr3 (30727301-30727514) | |
| 465-670, gnl|dasNov1|scaffold_3475 (87521-87722) | |
| 465-670, gnl|echTel1|scaffold_295851 (4248-4033) | |
| 465-670, gnl|fr1|chrUn (197684029-197683814) | |
| 465-670, gnl|galGal2|chrUn (22079060-22079275) | |
| 465-670, gnl|hg17|chr17 (35494387-35494602) | |
| 465-670, gnl|Hg17|chr17 (35494389-35494594) | |
| 465-670, gnl|loxAfr1|scaffold_33074 (8830-8617) | |
| 465-670, gnl|mm7|chr11 (98870758-98870973) | |
| 465-670, gnl|Mm7|chr11 (98870760-98870965) | |
| 465-670, gnl|monDom2|scaffold_18 (49311184-49311400) | |
| 465-670, gnl|oryCun1|scaffold_199304 (45054-45269) | |
| 465-670, gnl|panTro1|chr19 (38733576-38733791) | |
| 465-670, gnl|rheMac2|chr16 (50188535-50188750) | |
| 465-670, gnl|rn3|chr10 (87549223-87549438) | |
| 465-670, gnl|tetNig1|chrUn_random (134821043-134821256) | |
| 465-670, gnl|xenTro1|scaffold_670 (445418-445196) |