Non-Coding RNA Search

Ss1.1-Mixc-0032f14.5

Sequence:


               
               GCGAGAGCCCGCCCAGCAAAAAGACTGGCCCGATCCCGAGCTCTCCCGCCAGAATTTTAG
ACGGTTTTGTTATCAAGAGGCGTCTGGACCCCAAGAGGCACTCTCGCGGCTCCGGCAGCT
CTGCCGTCAGTGGTTGCAGCCCGAGGTGCACACCAAGGAGCAGATTTTGGAGCTACTGGT
GGTGGAGCAGTTTTTGAACATCCTGCCCCCCGAGATCCAGGCTCGAGCCAGGCGTCGATG
TCCAGTGAGCAGCAAGGAGATTGTGACCCTGGTGGGAAGATTTTCACAGAGCAGCCAAGG
GACCAAAGCAGTGGGTGGCTGTTTGCATGGAGGGCCAGAAGGTGCTCTTGGAGAAAACTG
GATCCCAGCTTGGAGAACAGGAACTGCCAGACTTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGAGAGCCCGCCCAGCAAAAAGACTGGCCCGATCCCGAGCTCTCCCGCCAGAATTTTAG
ACGGTTTTGTTATCAAGAGGCGTCTGGACCCCAAGAGGCACTCTCGCGGCTCCGGCAGCT
CTGCCGTCAGTGGTTGCAGCCCGAGGTGCACACCAAGGAGCAGATTTTGGAGCTACTGGT
GGTGGAGCAGTTTTTGAACATCCTGCCCCCCGAGATCCAGGCTCGAGCCAGGCGTCGATG
TCCAGTGAGCAGCAAGGAGATTGTGACCCTGGTGGGAAGATTTTCACAGAGCAGCCAAGG
GACCAAAGCAGTGGGTGGCTGTTTGCATGGAGGGCCAGAAGGTGCTCTTGGAGAAAACTG
GATCCCAGCTTGGAGAACAGGAACTGCCAGACTTTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|60594147|pdb|1Y7Q|B

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|60594147|pdb|1Y7Q|B

Aligned organism(s): 18 entry(ies)

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Aligned organism(s): 18 entry(ies)

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               38-318, gnl|bosTau2|chr19 (14951296-14951017)
               

               
               38-318, gnl|Hg17|chr17 (4953685-4953409)
               

               
               38-318, gnl|Mm7|chr5 (137070879-137071158)
               


               
               44-317, gnl|bosTau2|chr15 (19143625-19143353)
               

               
               44-317, gnl|canFam2|chr5 (13721301-13720956)
               

               
               44-317, gnl|dasNov1|scaffold_93729 (5833-5513)
               

               
               44-317, gnl|echTel1|scaffold_303413 (80665-81002)
               

               
               44-317, gnl|hg17|chr11 (123106317-123106662)
               

               
               44-317, gnl|Hg17|chr11 (123106674-123106402)
               

               
               44-317, gnl|loxAfr1|scaffold_11701 (33363-33018)
               

               
               44-317, gnl|mm7|chr9 (40137679-40137340)
               

               
               44-317, gnl|Mm7|chr9 (40137326-40137598)
               

               
               44-317, gnl|monDom2|scaffold_2 (112722771-112722438)
               

               
               44-317, gnl|oryCun1|scaffold_143249 (14890-14545)
               

               
               44-317, gnl|panTro1|chr9 (125147706-125148051)
               

               
               44-317, gnl|rheMac2|chr14 (122093376-122093720)
               

               
               44-317, gnl|rn3|chr8 (43167739-43167398)
               

               
               44-317, gnl|xenTro1|scaffold_1098 (193190-192830)

Aligned organism(s): 18 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               38-318, gnl|bosTau2|chr19 (14951296-14951017)
               

               
               38-318, gnl|Hg17|chr17 (4953685-4953409)
               

               
               38-318, gnl|Mm7|chr5 (137070879-137071158)
               


               
               44-317, gnl|bosTau2|chr15 (19143625-19143353)
               

               
               44-317, gnl|canFam2|chr5 (13721301-13720956)
               

               
               44-317, gnl|dasNov1|scaffold_93729 (5833-5513)
               

               
               44-317, gnl|echTel1|scaffold_303413 (80665-81002)
               

               
               44-317, gnl|hg17|chr11 (123106317-123106662)
               

               
               44-317, gnl|Hg17|chr11 (123106674-123106402)
               

               
               44-317, gnl|loxAfr1|scaffold_11701 (33363-33018)
               

               
               44-317, gnl|mm7|chr9 (40137679-40137340)
               

               
               44-317, gnl|Mm7|chr9 (40137326-40137598)
               

               
               44-317, gnl|monDom2|scaffold_2 (112722771-112722438)
               

               
               44-317, gnl|oryCun1|scaffold_143249 (14890-14545)
               

               
               44-317, gnl|panTro1|chr9 (125147706-125148051)
               

               
               44-317, gnl|rheMac2|chr14 (122093376-122093720)
               

               
               44-317, gnl|rn3|chr8 (43167739-43167398)
               

               
               44-317, gnl|xenTro1|scaffold_1098 (193190-192830)

	38-318, gnl\|bosTau2\|chr19 (14951296-14951017)
	38-318, gnl\|Hg17\|chr17 (4953685-4953409)
	38-318, gnl\|Mm7\|chr5 (137070879-137071158)

	44-317, gnl\|bosTau2\|chr15 (19143625-19143353)
	44-317, gnl\|canFam2\|chr5 (13721301-13720956)
	44-317, gnl\|dasNov1\|scaffold_93729 (5833-5513)
	44-317, gnl\|echTel1\|scaffold_303413 (80665-81002)
	44-317, gnl\|hg17\|chr11 (123106317-123106662)
	44-317, gnl\|Hg17\|chr11 (123106674-123106402)
	44-317, gnl\|loxAfr1\|scaffold_11701 (33363-33018)
	44-317, gnl\|mm7\|chr9 (40137679-40137340)
	44-317, gnl\|Mm7\|chr9 (40137326-40137598)
	44-317, gnl\|monDom2\|scaffold_2 (112722771-112722438)
	44-317, gnl\|oryCun1\|scaffold_143249 (14890-14545)
	44-317, gnl\|panTro1\|chr9 (125147706-125148051)
	44-317, gnl\|rheMac2\|chr14 (122093376-122093720)
	44-317, gnl\|rn3\|chr8 (43167739-43167398)
	44-317, gnl\|xenTro1\|scaffold_1098 (193190-192830)