Ss1.1-Mixc-0034d24.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAAGAGATGGCACTTTGCCCTTCGGCGGGAGGCGGCGGCCGCAGGTCCGAAGGCCATC GGCTTCGGGGGCCCGCCTGCAGCCTGCCGGCCTTTCCTCCGACCCCGCCCCCGGATCGGG GGCAGAGGAGCAGCATGGAGGCCGAGGACCTCCAGGAGGAGCTGAGCTGCTCCATCTGCC TGGACTATTTCGAGGACCCGGTGTCCATCGAGTGCGGCCACAACTTCTGCCGCGACTGCC TGCGCCGCGGTTTGGCGCCGGGCTGCAACCAGTTTCCCTGCCCCGAGTGCCGGCGGCCGT CGACGCCCTCTGCGCTGCGGCCCAACTGGGCCCTGGCCCGGCTGGCGCAGAAGGCGCGGC GCCGGCGCGAGGGCCCCGCGTCCCGCGGGCTGTGCGACCGTCACGGGGAGCCGCTGCGGC TCTTCTGCGAGGACGATCAGCGACTCATGTGCATGGTGTGCAGGGAGTCCCAGGAGCACC AGGCCCACACCATGGCCCCCATGGACGAGGCCTTCGAGAGCTACCGGGGAAAACTTCTGG AGGCTCAGTGTCATCTGACGGCCAAGTTGGAGAAAGCCATTGGTTTGCAGGACTTGGAGA TGAAGAATACTGCAGAGTGGAAGGAGAAGATGAAGAATCAGCGCCTGAGACTCAGCGCGG AGTTCGCAAAGCTGCGTCTCTTCCTGACTGAGGAAGAGCAGTTGTTTCTTCAGAGACTGA GCCAAGAAGAAGAAGAGACGAAGAAGAAACAGAGAGAGAAGACGTTAAGGCTCAGTCAGA TGGTCAGTGCCTTGAAGCAGCTCATCTCAGAGGTGAAGGAGAAGAGCCAGAGCCCCGAGC TGGAGCTGCTTCAGAATCCAAAAGATGTGTTGACCAGGTGTGAGAACCAGGACGTCAACT ATTCCCTTGAAGTTCTGCATGTGAAGACTGTGTGTCAGCTTCCAATGGTGAAGGAGCTGC TGAAGCGATTCCAAGGTGAGCACACTTCAGGCGGGTTGGAGCTCCCTAGACATCTTTCAA GTCAGAGAAGGAACAATGGGAGAAGTCTGGAAAGGAAAGAGAAAACAGGGCATGAGCTGA CAGGAGGGTGAGGAAAATGGTACCAACTCCTTAGGGATACGTGGATATAGCTTCATTCAA GAGACATCTGCTTAACACACACTGTGTGTTTGAAGGGAGTGGTGCAACAAAAAGAAAGGG AGGAGAGTGGGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAAGAGATGGCACTTTGCCCTTCGGCGGGAGGCGGCGGCCGCAGGTCCGAAGGCCATC GGCTTCGGGGGCCCGCCTGCAGCCTGCCGGCCTTTCCTCCGACCCCGCCCCCGGATCGGG GGCAGAGGAGCAGCATGGAGGCCGAGGACCTCCAGGAGGAGCTGAGCTGCTCCATCTGCC TGGACTATTTCGAGGACCCGGTGTCCATCGAGTGCGGCCACAACTTCTGCCGCGACTGCC TGCGCCGCGGTTTGGCGCCGGGCTGCAACCAGTTTCCCTGCCCCGAGTGCCGGCGGCCGT CGACGCCCTCTGCGCTGCGGCCCAACTGGGCCCTGGCCCGGCTGGCGCAGAAGGCGCGGC GCCGGCGCGAGGGCCCCGCGTCCCGCGGGCTGTGCGACCGTCACGGGGAGCCGCTGCGGC TCTTCTGCGAGGACGATCAGCGACTCATGTGCATGGTGTGCAGGGAGTCCCAGGAGCACC AGGCCCACACCATGGCCCCCATGGACGAGGCCTTCGAGAGCTACCGGGGAAAACTTCTGG AGGCTCAGTGTCATCTGACGGCCAAGTTGGAGAAAGCCATTGGTTTGCAGGACTTGGAGA TGAAGAATACTGCAGAGTGGAAGGAGAAGATGAAGAATCAGCGCCTGAGACTCAGCGCGG AGTTCGCAAAGCTGCGTCTCTTCCTGACTGAGGAAGAGCAGTTGTTTCTTCAGAGACTGA GCCAAGAAGAAGAAGAGACGAAGAAGAAACAGAGAGAGAAGACGTTAAGGCTCAGTCAGA TGGTCAGTGCCTTGAAGCAGCTCATCTCAGAGGTGAAGGAGAAGAGCCAGAGCCCCGAGC TGGAGCTGCTTCAGAATCCAAAAGATGTGTTGACCAGGTGTGAGAACCAGGACGTCAACT ATTCCCTTGAAGTTCTGCATGTGAAGACTGTGTGTCAGCTTCCAATGGTGAAGGAGCTGC TGAAGCGATTCCAAGGTGAGCACACTTCAGGCGGGTTGGAGCTCCCTAGACATCTTTCAA GTCAGAGAAGGAACAATGGGAGAAGTCTGGAAAGGAAAGAGAAAACAGGGCATGAGCTGA CAGGAGGGTGAGGAAAATGGTACCAACTCCTTAGGGATACGTGGATATAGCTTCATTCAA GAGACATCTGCTTAACACACACTGTGTGTTTGAAGGGAGTGGTGCAACAAAAAGAAAGGG AGGAGAGTGGGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 737-854, - strand, RNAz p=0.910826 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 737-854, - strand, RNAz p=0.910826 |
| Aligned organism(s): 27 entry(ies) | More info |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
| 115-528, gnl|bosTau2|chr25 (33063261-33062848) | |
| 115-528, gnl|canFam2|chr6 (12668294-12667986) | |
| 115-528, gnl|danRer3|chr10 (37537815-37538171) | |
| 115-528, gnl|dasNov1|scaffold_31042 (3053-2748) | |
| 115-528, gnl|echTel1|scaffold_85392 (1015-698) | |
| 115-528, gnl|fr1|chrUn (42128165-42128536) | |
| 115-528, gnl|galGal2|chr16 (113367-113681) | |
| 115-528, gnl|hg17|chr7 (99161323-99161631) | |
| 115-528, gnl|Hg17|chr7 (99161698-99161282) | |
| 115-528, gnl|loxAfr1|scaffold_78405 (5158-4841) | |
| 115-528, gnl|mm7|chr11 (59060151-59059843) | |
| 115-528, gnl|Mm7|chr11 (59059810-59060179) | |
| 115-528, gnl|monDom2|scaffold_66 (8435475-8435164) | |
| 115-528, gnl|oryCun1|scaffold_175569 (46551-46243) | |
| 115-528, gnl|panTro1|chr6 (100940534-100940842) | |
| 115-528, gnl|rheMac2|chr3 (47189851-47190159) | |
| 115-528, gnl|rn3|chr10 (45284708-45284400) | |
| 115-528, gnl|tetNig1|chr4 (1519047-1518676) | |
| 115-528, gnl|xenTro1|scaffold_690 (318596-318919) | |
| 130-428, gnl|bosTau2|chr19 (49653720-49654025) | |
| 130-428, gnl|Hg17|chr17 (71404616-71404296) | |
| 130-428, gnl|Mm7|chr11 (116240056-116239727) | |
| 622-854, gnl|bosTau2|chr25 (33056638-33056406) | |
| 622-854, gnl|Hg17|chr7 (99151088-99150856) | |
| 622-854, gnl|Mm7|chr11 (58727439-58727671) | |
| 876-1155, gnl|bosTau2|chr25 (33054743-33054480) | |
| 876-1155, gnl|Hg17|chr7 (99145591-99145329) |
| Aligned organism(s): 27 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 115-528, gnl|bosTau2|chr25 (33063261-33062848) | |
| 115-528, gnl|canFam2|chr6 (12668294-12667986) | |
| 115-528, gnl|danRer3|chr10 (37537815-37538171) | |
| 115-528, gnl|dasNov1|scaffold_31042 (3053-2748) | |
| 115-528, gnl|echTel1|scaffold_85392 (1015-698) | |
| 115-528, gnl|fr1|chrUn (42128165-42128536) | |
| 115-528, gnl|galGal2|chr16 (113367-113681) | |
| 115-528, gnl|hg17|chr7 (99161323-99161631) | |
| 115-528, gnl|Hg17|chr7 (99161698-99161282) | |
| 115-528, gnl|loxAfr1|scaffold_78405 (5158-4841) | |
| 115-528, gnl|mm7|chr11 (59060151-59059843) | |
| 115-528, gnl|Mm7|chr11 (59059810-59060179) | |
| 115-528, gnl|monDom2|scaffold_66 (8435475-8435164) | |
| 115-528, gnl|oryCun1|scaffold_175569 (46551-46243) | |
| 115-528, gnl|panTro1|chr6 (100940534-100940842) | |
| 115-528, gnl|rheMac2|chr3 (47189851-47190159) | |
| 115-528, gnl|rn3|chr10 (45284708-45284400) | |
| 115-528, gnl|tetNig1|chr4 (1519047-1518676) | |
| 115-528, gnl|xenTro1|scaffold_690 (318596-318919) | |
| 130-428, gnl|bosTau2|chr19 (49653720-49654025) | |
| 130-428, gnl|Hg17|chr17 (71404616-71404296) | |
| 130-428, gnl|Mm7|chr11 (116240056-116239727) | |
| 622-854, gnl|bosTau2|chr25 (33056638-33056406) | |
| 622-854, gnl|Hg17|chr7 (99151088-99150856) | |
| 622-854, gnl|Mm7|chr11 (58727439-58727671) | |
| 876-1155, gnl|bosTau2|chr25 (33054743-33054480) | |
| 876-1155, gnl|Hg17|chr7 (99145591-99145329) |