Ss1.1-Mixc-0034f18.5
|
GAGCTGAAAAGTAGAAGACAGACAGGCTGGGGAAGAAGAGAAAGTGCTCAAGGAGAAGGA
GCAGCAACAGCAGCACCAGCAGCAGCAGCAGCAAAAAAAGAAACGAGACACTCGAAAAGG
CCGGCGGAAGAAGGATGTGGATGATGATGATGGAGAGGAGAAGGAGCTCATGGAGCGTCT
TAAGAAGCTCTCAGTGCCGGCCAGTGATGAGGAGGAGGAGGCACCTGCCCCGGTGCCCCG
AGGAGGGAAGAAAAACAAGGGTGGTAATGTTTTTGCAGCTCTGATTCAGGATCAGAGTGA
GGAAGAGGAGGAGGAAGAAAAACATCCTCCTAAGCCAGCCAAGCCAGAGAAGAATCGCAT
CAATAAGGCTGTATCTCAGGAACAACAACCAGGGCCCAAGGGCAGAAAGGGAAAGGAGGA
AAAGTCAAAGGGCAAGGCCAAGCCTCAAAATAAATTTGCTGCTCTGGACGATGAAGAGGA
GCAGGATGAAGAGGAAATAAAAGAAAAGGAGCCTCCCAAGCAAGGGAAGGAGAAGGCCAA
GAAGGCAGAGCAGGGCTCAGAGGAGGAAGGAGAAGAGGAGGAGGAGGAAGGGGAGTCCAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAGCTGAAAAGTAGAAGACAGACAGGCTGGGGAAGAAGAGAAAGTGCTCAAGGAGAAGGA
GCAGCAACAGCAGCACCAGCAGCAGCAGCAGCAAAAAAAGAAACGAGACACTCGAAAAGG
CCGGCGGAAGAAGGATGTGGATGATGATGATGGAGAGGAGAAGGAGCTCATGGAGCGTCT
TAAGAAGCTCTCAGTGCCGGCCAGTGATGAGGAGGAGGAGGCACCTGCCCCGGTGCCCCG
AGGAGGGAAGAAAAACAAGGGTGGTAATGTTTTTGCAGCTCTGATTCAGGATCAGAGTGA
GGAAGAGGAGGAGGAAGAAAAACATCCTCCTAAGCCAGCCAAGCCAGAGAAGAATCGCAT
CAATAAGGCTGTATCTCAGGAACAACAACCAGGGCCCAAGGGCAGAAAGGGAAAGGAGGA
AAAGTCAAAGGGCAAGGCCAAGCCTCAAAATAAATTTGCTGCTCTGGACGATGAAGAGGA
GCAGGATGAAGAGGAAATAAAAGAAAAGGAGCCTCCCAAGCAAGGGAAGGAGAAGGCCAA
GAAGGCAGAGCAGGGCTCAGAGGAGGAAGGAGAAGAGGAGGAGGAGGAAGGGGAGTCCAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
86-221, gnl|bosTau2|chr23 (20905282-20905150) |
|
86-221, gnl|canFam2|chr12 (3401285-3401629) |
|
86-221, gnl|danRer3|chr19 (46610525-46610797) |
|
86-221, gnl|echTel1|scaffold_315780 (8318-8640) |
|
86-221, gnl|fr1|chrUn (71110634-71110384) |
|
86-221, gnl|hg17|chr6 (30653815-30654157) |
|
86-221, gnl|Hg17|chr6 (30653826-30653958) |
|
86-221, gnl|mm7|chr17 (34068098-34067789) |
|
86-221, gnl|Mm7|chr17 (34068091-34067959) |
|
86-221, gnl|monDom2|scaffold_42 (18733375-18733039) |
|
86-221, gnl|panTro1|chr5 (31111279-31111621) |
|
86-221, gnl|rheMac2|chr4 (30159946-30160288) |
|
86-221, gnl|rn3|chr20 (2954968-2955280) |
| |
|
258-368, gnl|bosTau2|chr23 (20904881-20904768) |
|
258-368, gnl|Hg17|chr6 (30654224-30654334) |
|
258-368, gnl|Mm7|chr17 (34067723-34067610) |
| |
|
441-554, gnl|bosTau2|chr23 (20903907-20903788) |
|
441-554, gnl|Mm7|chr17 (34067286-34067167) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
86-221, gnl|bosTau2|chr23 (20905282-20905150) |
|
86-221, gnl|canFam2|chr12 (3401285-3401629) |
|
86-221, gnl|danRer3|chr19 (46610525-46610797) |
|
86-221, gnl|echTel1|scaffold_315780 (8318-8640) |
|
86-221, gnl|fr1|chrUn (71110634-71110384) |
|
86-221, gnl|hg17|chr6 (30653815-30654157) |
|
86-221, gnl|Hg17|chr6 (30653826-30653958) |
|
86-221, gnl|mm7|chr17 (34068098-34067789) |
|
86-221, gnl|Mm7|chr17 (34068091-34067959) |
|
86-221, gnl|monDom2|scaffold_42 (18733375-18733039) |
|
86-221, gnl|panTro1|chr5 (31111279-31111621) |
|
86-221, gnl|rheMac2|chr4 (30159946-30160288) |
|
86-221, gnl|rn3|chr20 (2954968-2955280) |
| |
|
258-368, gnl|bosTau2|chr23 (20904881-20904768) |
|
258-368, gnl|Hg17|chr6 (30654224-30654334) |
|
258-368, gnl|Mm7|chr17 (34067723-34067610) |
| |
|
441-554, gnl|bosTau2|chr23 (20903907-20903788) |
|
441-554, gnl|Mm7|chr17 (34067286-34067167) |
