Non-Coding RNA Search

Ss1.1-Mixc-0034g22.3

Sequence:


               
               AAAACACAAAGAAACAAAGACACAAGTATGAAGGCATTGACCTCTGGGCAACCCCCGATG
CTGGATCGCTGCTATGCCAGACCCCGGAGGACTGAGAGGTGGCCAGCGCCCATCGCCCCC
TCCAGGATGGCATTTCCCCGGGTCTAGGACAGGCACGGCTCAGACTCCATTTACACGGGG
AAAAAGTCAGTCAAGTTCTGCTTCAGCCACCACCCTGCACCTGTTAGGCTCTGATCCTAC
AAAGAAGCCACCAAGGTGGGCAGAGCCATTCCCAGGCAGGGAACCAGCTGGTATACCAAC
CAGAAGCCTGTCCGATGTCAGGGTGCCTGTGCTCCCCCAGGAGGTGGTGGGCAGGCAGCC
CCGGCTCCCACCGTTTGGTAACAGAGGGTACACTTCCCAGTCCTCAGACAAGGATTCTCA
CCACTGGGTCCAAGCCGCAGGCCCTGGCCTCCGGGCTGAGAACGCCAGGTTCAAGGGTGA
GGAGGAAGAAACCCACGATGGAACACTCGGACGGACGGGGCCAGGAGCACGAGTGATGGG
GAGAGGCTGATGACGAAAACCAGACGAGGAGGGGAGACAGGGATAAAGAAAACAAGAGGG
AAGAACAGAGGAGAGAACAAAGAAGGAGGAGAAGAAGAATGGGGAAATAAGAGTTAAAAG
GGGAGGAGGGAGAAGTAGAAGAGGGCAAAGCAAATGCCAAGCTGGGACAAGAGAACCGGC
AGAAACGGGAGACACGCCTGGACGGGGGGCGCCCCCTGCAGGACAGCCTCTTCATTACAG
CGATGACCCGCGTGGAGGTCCTCAGGGCTGGTAAACCAACCAGAAAGAAGCCTGTCCGAT
GGCAGGGAGCCTGTGCTTCCCCAGCAGGTGGTGGGCAGGCAGCCCCGGCTCCTGCAGTGC
CCTCGGAAGTCCGCGCACACAGCCTGTCCAGAATCACGTCAGCAGCCCGCATGCGCAGTC
TCATCTTGACATACAAACTTCCATCAGGGCAGCCACGTCAATGACTGGCTGCCCAGCTCG
CAGGTGGTCCCTCCTTGAGGTCACGCAGAGGTCAATCTGTACATCCGAGCCTCGCCGGAG
CCTCTCCAGGTTCTCCTGGTCGTGCCACCCTCGTCCTGCCCCACCCGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACACAAAGAAACAAAGACACAAGTATGAAGGCATTGACCTCTGGGCAACCCCCGATG
CTGGATCGCTGCTATGCCAGACCCCGGAGGACTGAGAGGTGGCCAGCGCCCATCGCCCCC
TCCAGGATGGCATTTCCCCGGGTCTAGGACAGGCACGGCTCAGACTCCATTTACACGGGG
AAAAAGTCAGTCAAGTTCTGCTTCAGCCACCACCCTGCACCTGTTAGGCTCTGATCCTAC
AAAGAAGCCACCAAGGTGGGCAGAGCCATTCCCAGGCAGGGAACCAGCTGGTATACCAAC
CAGAAGCCTGTCCGATGTCAGGGTGCCTGTGCTCCCCCAGGAGGTGGTGGGCAGGCAGCC
CCGGCTCCCACCGTTTGGTAACAGAGGGTACACTTCCCAGTCCTCAGACAAGGATTCTCA
CCACTGGGTCCAAGCCGCAGGCCCTGGCCTCCGGGCTGAGAACGCCAGGTTCAAGGGTGA
GGAGGAAGAAACCCACGATGGAACACTCGGACGGACGGGGCCAGGAGCACGAGTGATGGG
GAGAGGCTGATGACGAAAACCAGACGAGGAGGGGAGACAGGGATAAAGAAAACAAGAGGG
AAGAACAGAGGAGAGAACAAAGAAGGAGGAGAAGAAGAATGGGGAAATAAGAGTTAAAAG
GGGAGGAGGGAGAAGTAGAAGAGGGCAAAGCAAATGCCAAGCTGGGACAAGAGAACCGGC
AGAAACGGGAGACACGCCTGGACGGGGGGCGCCCCCTGCAGGACAGCCTCTTCATTACAG
CGATGACCCGCGTGGAGGTCCTCAGGGCTGGTAAACCAACCAGAAAGAAGCCTGTCCGAT
GGCAGGGAGCCTGTGCTTCCCCAGCAGGTGGTGGGCAGGCAGCCCCGGCTCCTGCAGTGC
CCTCGGAAGTCCGCGCACACAGCCTGTCCAGAATCACGTCAGCAGCCCGCATGCGCAGTC
TCATCTTGACATACAAACTTCCATCAGGGCAGCCACGTCAATGACTGGCTGCCCAGCTCG
CAGGTGGTCCCTCCTTGAGGTCACGCAGAGGTCAATCTGTACATCCGAGCCTCGCCGGAG
CCTCTCCAGGTTCTCCTGGTCGTGCCACCCTCGTCCTGCCCCACCCGG

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-286, gnl|bosTau2|chr16 (3424188-3423900)
               

               
               1-286, gnl|Hg17|chr1 (201688145-201687851)
               

               
               1-286, gnl|Mm7|chr1 (132497617-132497901)
               


               
               368-810, gnl|bosTau2|chr16 (3423892-3423447)
               

               
               368-810, gnl|Hg17|chr1 (201687843-201687295)
               

               
               368-810, gnl|Mm7|chr1 (132497909-132498306)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-286, gnl|bosTau2|chr16 (3424188-3423900)
               

               
               1-286, gnl|Hg17|chr1 (201688145-201687851)
               

               
               1-286, gnl|Mm7|chr1 (132497617-132497901)
               


               
               368-810, gnl|bosTau2|chr16 (3423892-3423447)
               

               
               368-810, gnl|Hg17|chr1 (201687843-201687295)
               

               
               368-810, gnl|Mm7|chr1 (132497909-132498306)

	1-286, gnl\|bosTau2\|chr16 (3424188-3423900)
	1-286, gnl\|Hg17\|chr1 (201688145-201687851)
	1-286, gnl\|Mm7\|chr1 (132497617-132497901)

	368-810, gnl\|bosTau2\|chr16 (3423892-3423447)
	368-810, gnl\|Hg17\|chr1 (201687843-201687295)
	368-810, gnl\|Mm7\|chr1 (132497909-132498306)