Ss1.1-Mixc-0035i04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCACTGGGGACCTGAGATCCAGTCTGCAGATATACGTAGTCCTTCTTTGGGGGTGAGGA TTGGGTTTTGTTTCGTCCCCTTTCTATTGGAAGACAGACCATAATCCCCTTAGTGGATAA AATTGATTCTAATGTTTATTACCATTTGGGCTGAAGGTTACATCCGGTACCTTGACAAAG AGACTTTTCCTGGGGATGCTAGGCCTGGAAGCAAACACTCCTTGTTGTCTTCTTGACCTC ATTGACCCCAGGTTCCCTAGTTAAAATTGTGGGCCCACTACCGGCCTGGTGCCCAACAAC CACCGCCATGCGACTGAGCTCCCTACTGGCTCTGCTGCGACCAGCACTGCCCCTTATCCT AGGGCTGTCGCTGGGGTGCAGCCTGAGCCTCTTGCGGGTTTCCTGGATCCACGGGGAGGG AGAAGACCCCTGTGTTGAGGCTGTGGGGGAACCACGAGGGCCCCAGCATCCAGACTCAAG AACTCAGCTCGACCAAAGTGATGAAGACTTCAAACCCCGGATTGTCCCCTATTACAGGGA TCCCAACAAACCGTACAAGAAGGTGCTCAGGACTCGGTACATCCAGACGGAGCTGGGCTC TCGGGAGCGGTTGCTCGTGGCTGTCCTGACTTCTCGGGCTACGCTGTCCACTCTGGCTGT GGCTGTGAACCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCACTGGGGACCTGAGATCCAGTCTGCAGATATACGTAGTCCTTCTTTGGGGGTGAGGA TTGGGTTTTGTTTCGTCCCCTTTCTATTGGAAGACAGACCATAATCCCCTTAGTGGATAA AATTGATTCTAATGTTTATTACCATTTGGGCTGAAGGTTACATCCGGTACCTTGACAAAG AGACTTTTCCTGGGGATGCTAGGCCTGGAAGCAAACACTCCTTGTTGTCTTCTTGACCTC ATTGACCCCAGGTTCCCTAGTTAAAATTGTGGGCCCACTACCGGCCTGGTGCCCAACAAC CACCGCCATGCGACTGAGCTCCCTACTGGCTCTGCTGCGACCAGCACTGCCCCTTATCCT AGGGCTGTCGCTGGGGTGCAGCCTGAGCCTCTTGCGGGTTTCCTGGATCCACGGGGAGGG AGAAGACCCCTGTGTTGAGGCTGTGGGGGAACCACGAGGGCCCCAGCATCCAGACTCAAG AACTCAGCTCGACCAAAGTGATGAAGACTTCAAACCCCGGATTGTCCCCTATTACAGGGA TCCCAACAAACCGTACAAGAAGGTGCTCAGGACTCGGTACATCCAGACGGAGCTGGGCTC TCGGGAGCGGTTGCTCGTGGCTGTCCTGACTTCTCGGGCTACGCTGTCCACTCTGGCTGT GGCTGTGAACCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 339-462, + strand, RNAz p=0.788291 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 339-462, + strand, RNAz p=0.788291 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 300-462, gnl|bosTau2|chr4 (64362150-64361988) | |
| 300-462, gnl|Hg17|chr7 (150368738-150368900) | |
| 300-462, gnl|Mm7|chr5 (23628523-23628685) | |
| 568-672, gnl|bosTau2|chr4 (64361545-64361441) | |
| 568-672, gnl|canFam2|chr16 (18223900-18224497) | |
| 568-672, gnl|danRer3|chr7 (36089989-36089407) | |
| 568-672, gnl|dasNov1|scaffold_55366 (1759-2356) | |
| 568-672, gnl|echTel1|scaffold_267036 (2315-2906) | |
| 568-672, gnl|fr1|chrUn (3412252-3411676) | |
| 568-672, gnl|galGal2|chrUn (125733414-125734000) | |
| 568-672, gnl|hg17|chr7 (150369775-150370372) | |
| 568-672, gnl|Hg17|chr7 (150369779-150369883) | |
| 568-672, gnl|loxAfr1|scaffold_19096 (23227-23818) | |
| 568-672, gnl|mm7|chr5 (23629583-23630180) | |
| 568-672, gnl|Mm7|chr5 (23629587-23629691) | |
| 568-672, gnl|monDom2|scaffold_7 (11450697-11451290) | |
| 568-672, gnl|oryCun1|scaffold_208276 (102062-102657) | |
| 568-672, gnl|panTro1|chr6_random (16554958-16554361) | |
| 568-672, gnl|rheMac2|chr3 (188184360-188184957) | |
| 568-672, gnl|rn3|chr4 (5963383-5962786) | |
| 568-672, gnl|tetNig1|chr6 (4861094-4860517) | |
| 568-672, gnl|xenTro1|scaffold_1115 (167481-168057) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 300-462, gnl|bosTau2|chr4 (64362150-64361988) | |
| 300-462, gnl|Hg17|chr7 (150368738-150368900) | |
| 300-462, gnl|Mm7|chr5 (23628523-23628685) | |
| 568-672, gnl|bosTau2|chr4 (64361545-64361441) | |
| 568-672, gnl|canFam2|chr16 (18223900-18224497) | |
| 568-672, gnl|danRer3|chr7 (36089989-36089407) | |
| 568-672, gnl|dasNov1|scaffold_55366 (1759-2356) | |
| 568-672, gnl|echTel1|scaffold_267036 (2315-2906) | |
| 568-672, gnl|fr1|chrUn (3412252-3411676) | |
| 568-672, gnl|galGal2|chrUn (125733414-125734000) | |
| 568-672, gnl|hg17|chr7 (150369775-150370372) | |
| 568-672, gnl|Hg17|chr7 (150369779-150369883) | |
| 568-672, gnl|loxAfr1|scaffold_19096 (23227-23818) | |
| 568-672, gnl|mm7|chr5 (23629583-23630180) | |
| 568-672, gnl|Mm7|chr5 (23629587-23629691) | |
| 568-672, gnl|monDom2|scaffold_7 (11450697-11451290) | |
| 568-672, gnl|oryCun1|scaffold_208276 (102062-102657) | |
| 568-672, gnl|panTro1|chr6_random (16554958-16554361) | |
| 568-672, gnl|rheMac2|chr3 (188184360-188184957) | |
| 568-672, gnl|rn3|chr4 (5963383-5962786) | |
| 568-672, gnl|tetNig1|chr6 (4861094-4860517) | |
| 568-672, gnl|xenTro1|scaffold_1115 (167481-168057) |